Abstract
The new wheat germplasm 3228, a putative derivative of tetraploid Agropyron cristatum Z559 and the common wheat Fukuhokomugi, has superior features in yield-related traits, particularly in spike morphological traits, such as large spike and superior grain number. To identify favorable alleles of these traits in 3228, 237 F2:3 families were developed from the cross 3228/Jing 4839. A genetic map was constructed using 179 polymorphic SSR and EST-SSR markers. A total of 76 QTL controlling spike number per plant (SNP), spike length (SL), spikelet number per spike (SNS), floret number per spikelet (FNS), grain number per spike (GNS) and thousand-grain weight (TGW) were detected on 16 chromosomes. Each QTL explained 1.24–27.01% of the phenotypic variation, and 9 QTL (28.95%) were detected in two or all environments. Additive effects of 45 QTL were positive with 3228 alleles increasing the QTL effects, 31 QTL had negative effects indicating positive contributions from Jing 4839. Three important clusters involving all traits were located on chromosomes 5A, 6A and 4B, and several co-located QTL were also found. Most of the QTL detected on the three chromosome regions could contribute to the use of 3228 in breeding for grain yield improvement.
Similar content being viewed by others
References
Austin DF, Lee M (1996) Comparative mapping in F2:3 and F6:7 generations of quantitative trait loci for grain yield and yield components in maize. Theor Appl Genet 92:817–826
Börner A, Korzun V, Voylokov AV, Worland AJ, Weber WE (2000) Genetic mapping of quantitative trait loci in rye (Secale cereale L.). Euphytica 116:203–209
Börner A, Schumann E, Fürste A, Cöster H, Leithold B, Röder MS, Weber WE (2002) Mapping of quantitative trait loci determining agronomic important characters in hexaploid wheat (Triticum aestivum L.). Theor Appl Genet 105:921–936. doi:10.1007/s00122-002-0994-1
Breseghello F, Sorrells ME (2005) Association mapping of kernel size and milling quality in wheat (Triticum aestivum L.) cultivars. Genetics 177:1165–1177. doi:10.1007/s10709-009-9351-5
Chen Q, Jahier J, Cauderon Y (1990) Intergeneric hybrids between Triticum aestivum and three crested wheatgrasses: Agropyron mongolicum, A. michnoi, A. desertorum. Genome 33:663–667
Chen Q, Jahier J, Cauderon Y (1992) Production and cytogenetic analysis of BC1, BC2, and BC3 progenies of an intergeneric hybrid between Triticum aestivum (L.) Thell. and tetraploid Agropyron cristatum (L.) Gaertn. Theor Appl Genet 84:698–703
Cuthbert JL, Somers DJ, Brûlé-Babel AL, Brown PD, Crow GH (2008) Molecular mapping of quantitative trait loci for yield and yield components in spring wheat (Triticum aestivum L.). Theor Appl Genet 117:595–608. doi:10.1007/s00122-008-0804-5
Dellaport SL, Wood J, Hicks JB (1983) A plant DNA mini-preparation: version II. Plant Mol Biol Rep 1:19–21
Dewey DR (1984) The genomic system of classification as a guide to intergeneric hybridization with the perennial Triticeae. In: Gustafson JP (ed) Gene manipulation in plant improvement, 16th stadler genetics symposium. Plenum Press, New York, pp 209–279
Dholakia BB, Ammiraju JSS, Singh H, Lagu MD, Röder MS, Rao VS, Dhaliwal HS, Ranjekar PK, Gupta VS (2003) Molecular marker analysis of kernel size and shape in bread wheat. Plant Breed 122:392–395
Dong YS, Zhou RH, Xu SJ, Li LH, Cauderon Y, Wang RR-C (1992) Desirable characteristics in perennial Triticeae collected in China for wheat improvement. Hereditas 116:175–178
Groos C, Robert N, Bervas E, Charmet G (2003) Genetic analysis of grain protein-content, grain yield and thousand-kernel weight in bread wheat. Theor Appl Genet 106:1032–1040. doi:10.1007/s00122-002-1111-1
He DH, Lin ZX, Zhang XL, Nie YC, Guo XP, Feng CD, Stewart JM (2005) Mapping QTLs of traits contributing to yield and analysis of genetic effects in tetraploid cotton. Euphytica 144:141–149
Huang XQ, Cöster H, Ganal MW, Röder MS (2003) Advanced backcross QTL analysis for the identification of quantitative trait loci alleles from wild relatives of wheat (Triticum aestivum L.). Theor Appl Genet 106:1379–1389. doi:10.1007/s00122-002-1179-7
Huang XQ, Kempf H, Ganal MW, Röder MS (2004) Advanced backcross QTL analysis in progenies derived from a cross between a German elite winter wheat variety and a synthetic wheat (Triticum aestivum L.). Theor Appl Genet 109:933–943. doi:10.1007/s00122-004-1708-7
Huang XQ, Cloutier SC, Lycar L, Radovanovic N, Humphreys DG, Noll JS, Somers DJ, Brown PD (2006) Molecular detection of QTLs for agronomic and quality traits in a doubled haploid population derived from two Canadian wheats (Triticum aestivum L.). Theor Appl Genet 113:753–766. doi:10.1007/s00122-006-0346-7
Kato K, Miura H, Sawada S (2000) Mapping QTLs controlling grain yield and its components on chromosome 5A of wheat. Theor Appl Genet 101:1114–1121. doi:10.1007/s001220051587
Kosambi DD (1944) The estimation of map distances from recombination values. Ann Eugen 12:172–175
Kumar N, Kulwal PL, Balyan HS, Gupta PK (2007) QTL mapping for yield and yield contributing traits in two mapping populations of bread wheat. Mol Breed 19:163–177. doi:10.1007/s11032-006-9056-8
Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174–181
Li LH, Dong YS (1991) Hybridization between Triticum aestivum L. and Agropyron michnoi Roshev. 1. Production and cytogenetic study of F1 hybrids. Theor Appl Genet 81:312–316
Li LH, Dong YS (1993) A self-fertile trigeneric hybrid, Triticum aestivum × Agropyron michnoi × Secale cereale. Theor Appl Genet 87:361–368
Li LH, Dong YC, Zhou RH, Li XQ, Li P (1995) Cytogenetics and self-fertility of intergeneric hybrids between Triticum aestivum L. and Agropyron cristatum (L.) Gaertn. Acta Genet Sin 22:109–114
Li LH, Li XQ, Li P, Dong YC, Zhao GS (1997) Establishment of wheat-Agropyron cristatum alien addition lines. I. Cytology of F3, F2BC1, BC4 and BC3F1 progenies. Acta Genet Sin 24:154–159
Li LH, Yang XM, Zhou RH, Li XQ, Dong YC, Zhao H (1998) Establishment of wheat-Agropyron cristatum alien addition lines. II. Identification of alien chromosomes and analysis of development approaches. Acta Genet Sin 25:538–544
Li HH, Ye GY, Wang JK (2007a) A modified algorithm for the improvement of composite interval mapping. Genetics 175:361–374. doi:10.1534/genetics.106.066811
Li SS, Jia JZ, Wei XY, Zhang XC, Li LZ, Chen HM, Fan YD, Sun HY, Zhao XH, Lei TD, Xu YF, Jiang FS, Wang HG, Li LH (2007b) A intervarietal genetic map and QTL analysis for yield traits in wheat. Mol Breed 20:167–178. doi:10.1007/s11032-007-9080-3
Li YL, Dong YB, Niu SZ, Cui DQ, Wang YZ, Liu YY, Wei MG, Li XH (2007c) Identification of agronomically favorable quantitative trait loci alleles from a dent corn inbred Dan232 using advanced backcross QTL analysis and comparison with the F2:3 population in popcorn. Mol Breed. doi:10.1007/s11032-007-9104-z
Luan Y, Wang XG, Liu WH, Li CY, Zhang JP, Gao AN, Wang YD, Yang XM, Li LH (2010) Production and identification of wheat-Agropyron cristatum 6P translocation lines. Planta. doi:10.1007/s00425-010-1187-9
Marsan PA, Gorni C, Chittò A, Redaelli R, Vijk R, Stam P, Motto M (2001) Identification of QTLs for grain yield and grain-related traits of maize (Zea mays L.) using an AFLP map, different testers, and cofactor analysis. Theor Appl Genet 102:230–243
Marza F, Bai G-H, Carver BF, Zhou W-C (2006) Quantitative trait loci for yield and related traits in the wheat population Ning7840 × Clark. Theor Appl Genet 112:688–698
McCartney CA, Somers DJ, Humphreys DG, Lukow O, Ames N, Noll J, Cloutier S, McCallum BD (2005) Mapping quantitative trait loci controlling agronomic traits in the spring wheat cross RL4452 × ‘AC Domain’. Genome 48:870–883
McIntyre CL, Mathews KL, Rattey A, Chapman SC, Drenth J, Ghaderi M, Reynolds M, Shorter R (2010) Molecular detection of genomic regions associated with grain yield and yield-related components in an elite bread wheat cross evaluated under irrigated and rainfed conditions. Theor Appl Genet 120:527–541. doi:10.1007/s00122-009-1173-4
Narasimhamoorthy B, Gill BS, Fritz AK, Nelson JC, Brown-Guedira GL (2006) Advanced backcross QTL analysis of a hard winter wheat × synthetic wheat population. Theor Appl Genet 112:787–796. doi:10.1007/s00122-005-0159-0
Paillard S, Schnurbusch T, Winzeler M, Messmer M, Sourdille P, Abderhalden O, Keller B, Schachermayr G (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.). Theor Appl Genet 107:1235–1242
Peng J, Ronin Y, Fahima T, Röder MS, Li Y, Nevo E, Korol A (2003) Domestication quantitative trait loci in Triticum dicoccoides, the progenitor of wheat. Proc Natl Acad Sci 100:2489–2494. doi:10.1073/pnas.252763199
Quarrie SA, Steed A, Calestani C, Lebreton C, Semikhidskii A, Chinoy C, Steele N (2005) A high-density genetic map of hexaploid wheat (Triticum aestivum L.) from the cross Chinese Spring × SQ1 and its use to compare QTLs for grain yield across a range of environments. Theor Appl Genet 110:865–880. doi:10.1007/s00122-004-1902-7
Ribaut JM, Jiang C, Gonzalez-de-Leon D, Edmeades GO, Hoisington DA (1997) Identification of quantitative trait loci under drought conditions in tropical maize. 2. Yield components and marker-assisted selection strategies. Theor Appl Genet 94:887–896
Röder MS, Korzun V, Gill BS, Ganal MW (1998a) The physical mapping of microsatellite markers in wheat. Genome 41:278–283
Röder MS, Korzun V, Wandehake K, Planschke J, Tixier MH, Leroy P, Ganal MW (1998b) A microsatellite map of wheat. Genetics 149:2007–2023
Shah MM, Gill KS, Baenziger PS, Yen Y, Kaeppler SM, Ariyarathne HM (1999) Molecular mapping of loci for agronomic traits on chromosome 3A of bread wheat. Crop Sci 39:1728–1732
Snape JW, Butterworth K, Whitechurch E, Worland AJ (2001) Waiting for fine times: genetics of flowering time in wheat. Euphytica 119:185–190
Somers DJ, Isaac P, Edwards K (2004) A high density microsatellite consensus map for bread wheat (Triticum aestivum L.). Theor Appl Genet 109:1105–1114. doi:10.1007/s00122-004-1740-7
Sourdille P, Cadalen T, Guyomarc’h H, Snape JW, Perretant MR, Charmet G, Boeuf C, Bernard S, Bernard M (2003) An update of the Courtot × Chinese Spring intervarietal molecular marker linkage map for the QTL detection of agronomic traits in wheat. Theor Appl Genet 106:530–538
Sun XY, Wu K, Zhao Y, Kong FM, Han GZ, Jiang HM, Huang XJ, Li RJ, Wang HG, Li SS (2009) QTL analysis of kernel shape and weight using recombinant inbred lines in wheat. Euphytica 165:615–624. doi:10.1007/s10681-008-9794-2
Tsilo TJ, Hareland GA, Simsek S, Chao S, Anderson JA (2010) Genome mapping of kernel characteristics in hard red spring wheat breeding lines. Theor Appl Genet. doi:10.1007/s00122-010-1343-4
Wang JK (2009) Inclusive composite interval mapping of quantitative trait genes. Acta Agron Sin 35:239–245
Wang RX, Hai L, Zhang XY, You GX, Yan CS, Xiao SH (2009) QTL mapping for grain filling rate and yield-related traits in RILs of the Chinese winter wheat population Heshangmai × Yu8679. Theor Appl Genet 118:313–325. doi:10.1007/s00122-008-0901-5
Wu J, Yang XM, Wang H, Li HJ, Li LH, Li XQ, Liu WH (2006) The introgression of chromosome 6P specifying for increased numbers of florets and kernels from Agropyron cristatum into wheat. Theor Appl Genet 114:13–20. doi:10.1007/s00122-006-0405-0
Zhang L, Li H, Li Z, Wang JK (2008) Interactions between markers can be caused by the dominance effect of QTL. Genetics 180:1177–1190. doi:10.1534/genetics.108.092122
Acknowledgements
The financial support provided by the 973 project of China (Grant No. 2006CB101700), the National High-technology Research and Development Program (Grant No. 2006AA10Z174) and the National Key Technology Research and Development Program (Grant No. 2006BAD13B02) is gratefully acknowledged.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Wang, J., Liu, W., Wang, H. et al. QTL mapping of yield-related traits in the wheat germplasm 3228. Euphytica 177, 277–292 (2011). https://doi.org/10.1007/s10681-010-0267-z
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10681-010-0267-z