Abstract
Sugarcane (Saccharum spp.) is a highly productive tropical stem crop that has been cultivated for its high sugar content for hundreds of years. In recent times, sugarcane has been the focus of several programs aiming at the production of fuel ethanol. Compared to starch-based sources such as corn, production of ethanol from sugarcane has obvious advantages due to the amount of photosynthate accumulated during the crop cycle and the low production costs of sugarcane. The rise of cellulosic ethanol technologies will allow the conversion of part of the sugarcane lignocellulosic materials into ethanol, thus maximizing the utilization of this crop as a biofuel feedstock. Despite the rapid progress made in recent years, breeding and biotechnology have been hampered by the complex nature of sugarcane genetics and physiology. Biotechnology and marker-assisted breeding have great potential for generating cultivars and optimizing the utilization of sugarcane sucrose and lignocellulosic materials as a source of fuel ethanol. Other sugar-producing plants, such as sweet sorghum and sugar beet, are also potential biofuel sources, especially in water-limited and temperate areas, respectively, where sugarcane cultivation is not economically viable.
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References
Aitken K, Jackson P, McIntyre C (2005) A combination of AFLP and SSR markers provides extensive map coverage and identification of homo(eo)logous linkage groups in a sugarcane. Theor Appl Genet 110:789–801
Aitken KS, Jackson PA, McIntyre CL, Piperidis G (2002) Marker assisted introgressing of high sucrose genes in sugarcane. In: Proceedings of the 12th Australasian Plant Breeding Conference, Perth, Australia, 15–20 September 2002. p 120
Aitken KS, Jackson PA, McIntyre CL (2006) Quantitative trait loci identified for sugar related traits in a sugarcane (Saccharum spp.) cultivar × Saccharum officinarum population. Theor Appl Genet 112:1306–1317
Aitken KS, Hermann S, Karno K, Bonnett GD, McIntyre LC, Jackson PA (2008) Genetic control of yield related stalk traits in sugarcane. Theor Appl Genet 117:1191–1203
Akin D (2007) Grass lignocellulose. Appl Biochem Biotechnol 137–140:3–15
Amyris Biotechnologies (2009) Amyris Brasil, www.amyris.com/index.php?option=com_content&task=view&id=69&Itemid=257. Cited 28 September 2009
Arencibia AD, Carmona ER (2006) Sugarcane (Saccharum spp.). Methods Mol Biol 344:227–235
Arencibia A, Vázquez RI, Prieto D, Téllez P, Carmona ER, Coego A, Hernández L, Riva GADl, Selman-Housein G (1997) Transgenic sugarcane plants resistant to stem borer attack. Mol Breeding 3:247–255
Asnaghi C, Paulet F, Kaye C, Grivet L, Deu M, Glaszmann JC, D’Hont A (2000) Application of synteny across Poaceae to determine the map location of a sugarcane rust resistance gene. Theor Appl Genet 101:962–969
Asnaghi C, Roques D, Ruffel S, Kaye C, Hoarau J-Y, Télismart H, Girard JC, Raboin LM, Risterucci AM, Grivet L, D’Hont A (2004) Targeted mapping of a sugarcane rust resistance gene (Bru1) using bulked segregant analysis and AFLP markers. Theor Appl Genet 108:759–764
Atsumi S, Hanai T, Liao JC (2008) Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels. Nature 451:86–89
Bernardo R (2008) Molecular markers and selection for complex traits in plants: learning from the last 20 years. Crop Sci 48:1649–1664
Bout S, Vermerris W (2003) A candidate-gene approach to clone the sorghum Brown midrib gene encoding caffeic acid O-methyltransferase. Mol Genet Genomics 269:205–214
Bower R, Birch RG (1992) Transgenic sugarcane plants via microprojectile bombardment. Plant J 2:409–416
Braga DPV, Arrigoni EDB, Burnquist WL, Silva-Filho MC, Ulian EC (2001) A new approach for control of Diatraea saccharalis (Lepidoptera: Crambidae) through the expression of an insecticidal CryIa(b) protein in transgenic sugarcane. Proc Int Soc Sugar Cane Technol 24:331–336
Braga DPV, Arrigoni EDB, Silva-Filho MC, Ulian EC (2003) Expression of the Cry1Ab protein in genetically modified sugarcane for the control of Diatraea saccharalis (Lepidoptera: Crambidae). J New Seeds 5:209–221
Braithwaite KS, Geijskes RJ, Smith GR (2004) A variable region of the sugarcane bacilliform virus (SCBV) genome can be used to generate promoters for transgene expression in sugarcane. Plant Cell Rep 23:319–326
Bundock PC, Eliott FG, Ablett G, Benson AD, Casu RE, Aitken KS, Henry RJ (2009) Targeted single nucleotide polymorphism (SNP) discovery in a highly polyploid plant species using 454 sequencing. Plant Biotechnol J 7:347–354
Calsa T, Figueira A (2007) Serial analysis of gene expression in sugarcane (Saccharum spp.) leaves revealed alternative C4 metabolism and putative antisense transcripts. Plant Mol Biol 63:745–762
Casler MD, Jung HG, Coblentz WK (2008) Clonal selection for lignin and etherified ferulates in three perennial grasses. Crop Sci 48:424–433
Casu RE, Grof CPL, Rae AL, McIntyre CL, Dimmock CM, Manners JM (2003) Identification of a novel sugar transporter homologue strongly expressed in maturing stem vascular tissues of sugarcane by expressed sequence tag and microarray analysis. Plant Mol Biol 52:371–386
Casu RE, Dimmock CM, Chapman SC, Grof CP, McIntyre CL, Bonnett GD, Manners JM (2004) Identification of differentially expressed transcripts from maturing stem of sugarcane by in silico analysis of stem expressed sequence tags and gene expression profiling. Plant Mol Biol 54:503–517
Casu RE, Jarmey JM, Bonnett GD, Manners JM (2007) Identification of transcripts associated with cell wall metabolism and development in the stem of sugarcane by Affymetrix GeneChip Sugarcane Genome Array expression profiling. Funct Integr Genomics 7:153–167
Chen F, Dixon RA (2007) Lignin modification improves fermentable sugar yields for biofuel production. Nat Biotechnol 25:759–761
Christensen A, Quail P (1996) Ubiquitin promoter-based vectors for high-level expression of selectable and/or screenable marker genes in monocotyledonous plants. Transgenic Res 5:213–218
Christy L, Arvinth S, Saravanakumar M, Kanchana M, Mukunthan N, Srikanth J, Thomas G, Subramonian N (2009) Engineering sugarcane cultivars with bovine pancreatic trypsin inhibitor (aprotinin) gene for protection against top borer (Scirpophaga excerptalis Walker). Plant Cell Rep 28:175–184
Cordeiro G, Casu R, McIntyre C, Manners J, Henry R (2001) Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross transferable to erianthus and sorghum. Plant Sci 160:1115–1123
Cordeiro G, Eliott F, McIntyre C, Casu R, Henry R (2006) Characterisation of single nucleotide polymorphisms in sugarcane ESTs. Theor Appl Genet 113:331–343
Cordeiro G, Amouyal O, Eliott F, Henry R (2007) Sugarcane. In: Kole C (ed) Pulses, sugar and tuber crops, vol 3. Springer, Heidelberg, pp 175–203
Coyle W (2007) The future of biofuels: a global perspective. http://www.ers.usda.gov/AmberWaves/November07/Features/Biofuels.htm Cited 19 September 2009
Damaj MB, Kumpatla SP, Emani C, Beremand PD, Reddy AS, Rathore KS, Buenrostro-Nava MT, Curtis IS, Thomas TL, Mirkov TE (2010) Sugarcane DIRIGENT and O-METHYLTRANSFERASE promoters confer stem-regulated gene expression in diverse monocots. Planta, doi: 10.1007/s00425-010-1138-5
Da Silva JA, Bressiani JA (2005) Sucrose synthase molecular marker associated with sugar content in elite sugarcane progeny. Genet Mol Biol 28:294–298
Daugrois JH, Grivet L, Roques D, Hoarau JY, Lombard H, Glaszmann JC, D’Hont A (1996) A putative major gene for rust resistance linked with a RFLP marker in sugarcane cultivar ‘R570’. Theor Appl Genet 92:1059–1064
De Marchis F, Wang Y, Stevanato P, Arcioni S, Bellucci M (2009) Genetic transformation of the sugar beet plastome. Transgenic Res 18:17–30
De Souza AP, Gaspar M, da Silva EA, Ulian EC, Waclawovsky AJ, Nishiyama MY Jr, dos Santos R, Teixeira MM, Souza GM, Buckeridge MS (2008) Elevated CO2 increases photosynthesis, biomass and productivity, and modifies gene expression in sugarcane. Plant Cell Environ 31:1116–1127
D’Hont A, Souza GM, Menossi M, Vincentz M, Van-Sluys M-A, Glaszmann JC, Ulian E (2008) Sugarcane: a major source of sweetness, alcohol, and bio-energy. In: Moore PH, Ming R (eds) Genomics of tropical crop plants, vol 1. Springer, New York, pp 483–513
Dufour P, Deu M, Grivet L, D’Hont A, Paulet F, Bouet A, Lanaud C, Glaszmann JC, Hamon P (1997) Construction of a composite sorghum genome map and comparison with sugarcane, a related complex polyploid. Theor Appl Genet 94:409–418
Eathington SR, Crosbie TM, Edwards MD, Reiter RS, Bull JK (2007) Molecular markers in a commercial breeding program. Crop Sci 47:S154–S163
Edgerton MD (2009) Increasing crop productivity to meet global needs for feed, food, and fuel. Plant Physiol 149:7–13
Falco M, Silva-Filho M (2003) Expression of soybean proteinase inhibitors intransgenic sugarcane plants: effects on natural defense against Diatrea saccharalis. Plant Physiol Biochem 41:761–766
Falco MC, Tulmann Neto A, Ulian EC (2000) Transformation and expression of a gene for herbicide resistance in a Brazilian sugarcane. Plant Cell Rep 19:1188–1194
FAOSTAT (2007) FAO (United Nations Food and Agricultural Organization), Rome. http://faostat.fao.org/default.aspx Cited 17 September 2009
Food and Agricultural Policy Research Institute (2009) FAPRI 2009 U.S. and World Agricultural Outlook. http://www.fapri.iastate.edu/outlook/2009/ Cited 18 September 2009
Farrell AE, Plevin RJ, Turner BT, Jones AD, O’Hare M, Kammen DM (2006) Ethanol can contribute to energy and environmental goals. Science 311:506–508
Francis SA (2006) The development of sugarbeet. In: Draycott AP (ed) Sugar beet. Wiley-Blackwell, Oxford, pp 9–29
Freelman KC, Braodhead DM, Zummo N, Westbrook FE (1986) Sweet sorghum culture and syrup production. USDA Agriculture Handbook, Number 611, United States Department of Agriculture, Washington, DC
Gallo-Meagher M, Irvine JE (1996) Herbicide resistant transgenic sugarcane plants containing the bar gene. Crop Sci 36:1367–1374
Gao ZS, Jayaraj J, Muthukrishnan S, Claflin L, Liang GH (2005) Efficient genetic transformation of sorghum using a visual screening marker. Genome 48:321–333
Garcia AAF, Kido EA, Meza AN, Souza HMB, Pinto LR, Pastina MM, Leite CS, Silva JAG, Ulian EC, Figueira A, Souza AP (2006) Development of an integrated genetic map of a sugarcane (Saccharum spp.) commercial cross, based on a maximum-likelihood approach for estimation of linkage and linkage phases. Theor Appl Genet 112:298–314
Girijashankar V, Sharma HC, Sharma KK, Swathisree V, Prasad LS, Bhat BV, Royer M, San Secundo B, Narasu ML, Altosaar I, Seetharama N (2005) Development of transgenic sorghum for insect resistance against the Spotted Stem Borer (Chilo partellus). Plant Cell Rep 24:513–522
Glaszmann JC, Dufour P, Grivet L, D’Hont A, Deu M, Paulet F, Hamon P (1997) Comparative genome analysis between several tropical grasses. Euphytica 96:13–21
Gnansounou E, Dauriat A, Wyman CE (2005) Refining sweet sorghum to ethanol and sugar: economic trade-offs in the context of North China. Bioresour Technol 96:985–1002
Godwin ID (2004) Sorghum genetic engineering: current status and prospectus. In: Seetharama N, Godwin I (eds) Sorghum tissue culture and transformation. Oxford & IBH, New Delhi, pp 1–8
Goldemberg J (2007) Ethanol for a sustainable energy future. Science 315:808–810
Goldemberg J, Guardabassi P (2009) Are biofuels a feasible option? Energy Policy 37:10–14
Grivet L, D’Hont A, Dufour P, Hamon P, Roques D, Glaszmann JC (1994) Comparative genome mapping of sugar cane with other species within the Andropogoneae tribe. Heredity 73:500–508
Grivet L, Glaszmann JC, Vincentz M, da Silva F, Arruda P (2003) ESTs as a source for sequence polymorphism discovery in sugarcane: example of the Adh genes. Theor Appl Genet 106:190–197
Groenewald J-H, Botha FC (2008) Down-regulation of pyrophosphate: fructose 6-phosphate 1-phosphotransferase (PFP) activity in sugarcane enhances sucrose accumulation in immature internodes. Transgenic Res 17:85–92
Groenewald J-H, Hiten NF, Botha FC (2000) The introduction of an inverted repeat to the 5’ untranslated leader sequence of a transgene strongly inhibits gene expression. Plant Cell Rep 19:1098–1101
Guimarães CT, Sills GR, Sobral BWS (1997) Comparative mapping of Andropogoneae: Saccharum L. (sugarcane) and its relation to sorghum and maize. Proc Natl Acad Sci USA 94:14261–14266
Gupta P, Rustgi S, Mir R (2008) Array-based high-throughput DNA markers for crop improvement. Heredity 101:5–18
Hoarau J-Y, Grivet L, Offmann B, Raboin L-M, Diorflar J-P, Payet J, Hellmann M, D’Hont A, Glaszmann JC (2002) Genetic dissection of a modern sugarcane cultivar (Saccharum spp.). II. Detection of QTLs for yield components. Theor Appl Genet 105:1027–1037
Hood EE, Love R, Lane J, Bray J, Clough R, Pappu K, Drees C, Hood KR, Yoon S, Ahmad A, Howard JA (2007) Subcellular targeting is a key condition for high-level accumulation of cellulase protein in transgenic maize seed. Plant Biotechnol J 5:709–719
Howe A, Sato S, Dweikat I, Fromm M, Clemente T (2006) Rapid and reproducible Agrobacterium-mediated transformation of sorghum. Plant Cell Rep 25:784–791
Inman-Bamber NG, Bonnett GD, Spillman MF, Hewitt ML, Jackson J (2008) Increasing sucrose accumulation in sugarcane by manipulating leaf extension and photosynthesis with irrigation. Aust J Agric Res 59:13–26
Inman-Bamber NG, Bonnett GD, Spillman MF, Hewitt ML, Xu J (2009) Source-sink differences in genotypes and water regimes influencing sucrose accumulation in sugarcane stalks. Crop Pasture Sci 60:316–327
Irvine J (1975) Relations of photosynthetic rates and leaf canopy characters to sugarcane yield. Crop Sci 15:671–676
Ivic-Haymes SD, Smigocki AC (2005) Biolistic transformation of highly regenerative sugar beet (Beta vulgaris L.) leaves. Plant Cell Rep 23:699–704
Jackson PA (2005) Breeding for improved sugar content in sugarcane. Field Crops Res 92:277–290
Jannoo N, Grivet L, Chantret N, Garsmeur O, Glaszmann JC, Arruda P, D’Hont A (2007) Orthologous comparison in a gene-rich region among grasses reveals stability in the sugarcane polyploid genome. Plant J 50:574–585
Jogeswar G, Ranadheer D, Anjaiah V, Kavi Kishor PB (2007) High frequency somatic embryogenesis and regeneration in different genotypes of Sorghum bicolor (L.) Moench from immature inflorescence explants. In Vitro Cell Dev Biol Plant 43:159–166
Lakshmanan P, Geijskes R, Aitken K, Grof C, Bonnett G, Smith G (2005) Sugarcane biotechnology: the challenges and opportunities. In Vitro Cell Dev Biol Plant 41:345–363
Leibbrandt NB, Snyman SJ (2003) Stability of gene expression and agronomic performance of a transgenic herbicide-resistant sugarcane line in South Africa. Crop Sci 43:671–677
Li X, Weng J-K, Chapple C (2008) Improvement of biomass through lignin modification. Plant J 54:569–581
Licht FO (2006) World ethanol markets—the outlook to 2015. Agra Informa, Tunbridge Wells, UK
Lima DU, Santos HP, Tiné MA, Molle FRD, Buckeridge MS (2001) Patterns of expression of cell wall related genes in sugarcane. Genet Mol Biol 24:191–198
Lima MLA, Garcia AAF, Oliveira KM, Matsuoka S, Arizono H, de Souza CL Jr, de Souza AP (2002) Analysis of genetic similarity detected by AFLP and coefficient of parentage among genotypes of sugar cane (Saccharum spp.). Theor Appl Genet 104:30–38
Macedo IC, Cortez LAB (2000) Sugar-cane industrial processing in Brazil. In: Rosillo-Calle F, Bajay SV, Rothman H (eds) Industrial uses of biomass energy. Taylor-Francis, London, pp 140–154
Manickavasagam M, Ganapathi A, Anbazhagan VR, Sudhakar B, Selvaraj N, Vasudevan A, Kasthurirengan S (2004) Agrobacterium-mediated genetic transformation and development of herbicide-resistant sugarcane (Saccharum species hybrids) using axillary buds. Plant Cell Rep 23:134–143
Martin VJ, Pitera DJ, Withers ST, Newman JD, Keasling JD (2003) Engineering a mevalonate pathway in Escherichia coli for production of terpenoids. Nat Biotechnol 21:796–802
Matsuoka S, Ferro J, Arruda P (2009) The Brazilian experience of sugarcane ethanol industry. In Vitro Cell Dev Biol Plant 45:372–381
McCormick AJ, Cramer MD, Watt DA (2006) Sink strength regulates photosynthesis in sugarcane. New Phytol 171:759–770
McCormick AJ, Watt DA, Cramer MD (2008a) Changes in photosynthetic rates and gene expression of leaves during a source sink perturbation in sugarcane. Ann Bot 101:89–102
McCormick AJ, Cramer MD, Watt DA (2008b) Regulation of photosynthesis by sugars in sugarcane leaves. J Plant Physiol 165:1817–1829
McCormick AJ, Cramer MD, Watt DA (2008c) Culm sucrose accumulation promoter physiological decline of mature leaves in ripening sugarcane. Field Crops Res 108:250–258
McIntyre CL, Whan VA, Croft B, Magarey R, Smith GR (2005) Identification and validation of molecular markers associated with Pachymetra Root Rot and Brown Rust resistance in sugarcane using map- and association-based approaches. Mol Breeding 16:151–161
Ming R, Liu SC, Lin YR, da Silva J, Wilson W, Braga D, van Deynze A, Wenslaff TF, Wu KK, Moore PH, Burnquist W, Sorrells ME, Irvine JE, Paterson AH (1998) Detailed alignment of Sorghum and Saccharum chromosomes: comparative organization of closely related diploid and polyploid genomes. Genetics 150:1663–1882
Moore PH (1995) Temporal and spatial regulation of sucrose accumulation in the sugarcane stem. Aust J Plant Physiol 22:661–679
Mudge SR, Osabe K, Casu RE, Bonnett GD, Manners JM, Birch RG (2008) Efficient silencing of reporter transgenes coupled to known functional promoters in sugarcane, a highly polyploid crop species. Planta 229:549–558
Nass LL, Pereira PAA, Ellis D (2007) Biofuels in Brazil: an overview. Crop Sci 47:2228–2237
Nicholson TL (2007) Carbon turnover and sucrose metabolism in the culm of transgenic sugarcane producing 1-kestose. MSc Thesis. University of Stellenbosch, Matieland, South Africa
Nogueira FTS, De Rosa VE Jr, Menossi M, Ulian EC, Arruda P (2003) RNA expression profiles and data mining of sugarcane response to low temperature. Plant Physiol 132:1811–1824
Nogueira FTS, Schlögl PS, Camargo SR, Fernandez JH, Vicente E, De Rosa J, Pompermayer P, Arruda P (2005) SsNAC23, a member of the NAC domain protein family, is associated with cold, herbivory and water stress in sugarcane. Plant Sci 169:93–106
Nutt KA, Allsopp PG, McGhie TK, Shepherd KM, Joyce PA, Taylor GO, McQualter RB, Smith GR (1999) Transgenic sugarcane with increased resistance to canegrubs. Proc Aust Soc Sugar Cane Technol 21:171–176
Oliveira KM, Pinto LR, Marconi TG, Margarido GRA, Pastina MM, Teixeira LHM, Figueira AV, Ulian EC, Garcia AAF, Souza AP (2007) Functional integrated genetic linkage map based on EST-markers for a sugarcane (Saccharum spp.) commercial cross. Mol Breeding 20:189–208
Oliveira KM, Pinto LR, Marconi TG, Mollinari M, Ulian EC, Chabregas SM, Falco MC, Burnquist W, Garcia AAF, Souza AP (2009) Characterization of new polymorphic functional markers for sugarcane. Genome 52:191–209
Oraby H, Venkatesh B, Dale B, Ahmad R, Ransom C, Oehmke J, Sticklen M (2007) Enhanced conversion of plant biomass into glucose using transgenic rice-produced endoglucanase for cellulosic ethanol. Transgenic Res 16:739–749
Pandey A, Soccol CR, Nigam P, Soccol VT (2000) Biotechnological potential of agro-industrial residues. I: sugarcane bagasse. Bioresour Technol 74:69–80
Papini-Terzi F, Rocha F, Vencio R, Felix J, Branco D, Waclawovsky A, Del Bem L, Lembke C, Costa M, Nishiyama M, Vicentini R, Vincentz M, Ulian E, Menossi M, Souza G (2009) Sugarcane genes associated with sucrose content. BMC Genomics 10:120
Papini-Terzi FS, Rocha FR, Nicoliello Vencio RZ, Oliveira KC, de Maria Felix J, Vicentini R, de Souza Rocha C, Quirino Simões AC, Ulian EC, Marli Zingaretti di Mauro S, Maria Da Silva A, Alberto de Braganca Pereira C, Menossi M, Souza GM (2005) Transcription profiling of signal transduction-related genes in sugarcane tissues. DNA Res 12:27–38
Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Narechania A, Otillar RP, Penning BW, Salamov AA, Wang Y, Zhang L, Carpita NC, Freeling M, Gingle AR, Hash CT, Keller B, Klein P, Kresovich S, McCann MC, Ming R, Peterson DG, Mehboob-ur-Rahman, Ware D, Westhoff P, Mayer KF, Messing J, Rokhsar DS (2009) The Sorghum bicolor genome and the diversification of grasses. Nature 457:551–556
Paul MJ, Foyer CH (2001) Sink regulation of photosynthesis. J Exp Bot 52:1383–1400
Pessoa A Jr, Mancilha IM, Sato S (1997) Acid hydrolysis of hemicellulose from sugarcane bagasse. Braz J Chem Eng 14:309–312
Pinto LR, Oliveira KM, Ulian EC, Garcia AAF, de Souza AP (2004) Survey in the sugarcane expressed sequence tag database (SUCEST) for simple sequence repeats. Genome 47:795–804
Pinto LR, Oliveira KM, Marconi T, Garcia AAF, Ulian EC, Souza APd (2006) Characterization of novel sugarcane expressed sequence tag microsatellites and their comparison with genomic SSRs. Plant Breed 125:378–384
Porter KS, Axtell J D, Lechtenberg VL, Colenbrander V F (1978) Phenotype, fiber composition, and in vitro dry matter disappearance of chemically induced brown midrib (bmr) mutants of sorghum. Crop Sci 18:205–208
Prasad P, Vu J, Boote K, Allen L (2009) Enhancement in leaf photosynthesis and upregulation of Rubisco in the C4 sorghum plant at elevated growth carbon dioxide and temperature occur at early stages of leaf ontogeny. Funct Plant Biol 36:761–769
Prasad S, Singh, Anoop, Jain N, Joshi H C (2007) Ethanol production from sweet sorghum syrup for utilization as automotive fuel in India. Energy Fuel 21:2415–2420
Raboin L, Oliveira K, Lecunff L, Telismart H, Roques D, Butterfield M, Hoarau J, D’Hont A (2006) Genetic mapping in sugarcane, a high polyploid, using bi-parental progeny: identification of a gene controlling stalk colour and a new rust resistance gene. Theor Appl Genet 112:1382–1391
Ragauskas AJ, Williams CK, Davison BH, Britovsek G, Cairney J, Eckert CA, Frederick WJ Jr, Hallett JP, Leak DJ, Liotta CL, Mielenz JR, Murphy R, Templer R, Tschaplinski T (2006) The path forward for biofuels and biomaterials. Science 311:484–489
Ramos RLB, Tovar FJ, Junqueira RM, Lino FB, Sachetto-Martins G (2001) Sugarcane expressed sequences tags (ESTs) encoding enzymes involved in lignin biosynthesis pathways. Genet Mol Biol 24:235–241
Reffay N, Jackson PA, Aitken KS, Hoarau J-Y, D’Hont A, Besse P, McIntyre CL (2005) Characterisation of genome regions incorporated from an important wild relative into Australian sugarcane. Mol Breeding 15:367–381
Rocha F, Papini-Terzi F, Nishiyama M, Vencio R, Vicentini R, Duarte R, de Rosa V, Vinagre F, Barsalobres C, Medeiros A, Rodrigues F, Ulian E, Zingaretti S, Galbiatti J, Almeida R, Figueira A, Hemerly A, Silva-Filho M, Menossi M, Souza G (2007) Signal transduction-related responses to phytohormones and environmental challenges in sugarcane. BMC Genomics 8:71
Rossi M, Araujo PG, Paulet F, Garsmeur O, Dias VM, Chen H, Van Sluys M-A, D’Hont A (2003) Genomic distribution and characterization of EST-derived resistance gene analogs (RGAs) in sugarcane. Mol Genet Genomics 269:406–419
Saballos A (2008) Development and utilization of sorghum as a bioenergy crop. In: Vermerris W (ed) Genetic improvement of bioenergy crops. Springer, New York, pp 211–248
Saballos A, Ejeta G, Sanchez E, Kang C, Vermerris W (2009) A genome-wide analysis of the cinnamyl alcohol dehydrogenase family in sorghum (Sorghum bicolor (L.) Moench) identifies SbCAD2 as the Brown midrib6 gene. Genetics 181:783–795
Sainz M (2009) Commercial cellulosic ethanol: the role of plant-expressed enzymes. In Vitro Cell Dev Biol Plant 45:314–329
Sattler SE, Saathoff AJ, Haas EJ, Palmer NA, Funnell-Harris DL, Sarath G, Pedersen JF (2009) A nonsense mutation in a cinnamyl alcohol dehydrogenase gene is responsible for the sorghum brown midrib6 phenotype. Plant Physiol 150:584–595
Schenk PM, Remans T, Sági L, Elliott AR, Dietzgen RG, Swennen R, Ebert PR, Grof CPL, Manners JM (2001) Promoters for pregenomic RNA of banana streak badnavirus are active for transgene expression in monocot and dicot plants. Plant Mol Biol 47:399–412
Schlögl PS, Nogueira FTS, Drummond R, Felix JM, de Rosa VE Jr, Vicentini R, Leite A, Ulian EC, Menossi M (2008) Identification of new ABA- and MEJA-activated sugarcane bZIP genes by data mining in the SUCEST database. Plant Cell Rep 27:335–345
Sendelius J (2005) Steam pretreatment optimisation for sugarcane bagasse in bioethanol production. MSc Thesis. Lund University, Lund, Sweden
Sévenier R, Hall RD, van der Meer I, Hakkert HJ, van Tunen AJ, Koops AJ (1998) High level fructan accumulation in a transgenic sugar beet. Nat Biotechnol 16:843–846
Songstad DD, Lakshmanan P, Chen J, Gibbons W, Hughes S, Nelson R (2009) Historical perspective of biofuels: learning from the past to rediscover the future. In Vitro Cell Dev Biol Plant 45:189–192
Sticklen MB (2008) Plant genetic engineering for biofuel production: towards affordable cellulosic ethanol. Nat Rev Genet 9:433–443
Sugarcane Genome Sequencing Initiative (2009) In: Proceedings of the Plant and Animal Genome XVIII Conference, San Diego, CA
Syvänen A-C (2005) Toward genome-wide SNP genotyping. Nat Genet 27:S5–S10
UNICA (2009) União das Indústrias de Cana-de-açúcar. Dados e Cotações—EstatÃsticas. http://www.unica.com.br/dadosCotacao/estatistica/ Cited 18 September 2009
University of Queensland (2009) UQ researchers produce world’s first transgenic sweet sorghum. http://www.uq.edu.au/news/index.html?article=20025 Cited 13 November 2009
USDA (2006) The economic feasibility of ethanol production from sugar in the United States. US Department of Agriculture. http://www.usda.gov/oce/reports/energy/EthanolSugarFeasibilityReport3.pdf Cited 18 October 2009
Vettore AL, da Silva FR, Kemper EL, Arruda P (2001) The libraries that made SUCEST. Genet Mol Biol 24:1–7
Vettore AL, da Silva FR, Kemper EL, Souza GM, da Silva AM, Ferro MIT, Henrique-Silva F, Giglioti EA, Lemos MVF, Coutinho LL, Nobrega MP, Carrer H, Franca SC, Bacci M Jr, Goldman MHS, Gomes SL, Nunes LR, Camargo LEA, Siqueira WJ, Van Sluys M-A, Thiemann OH, Kuramae EE, Santelli RV, Marino CL, Targon MLPN, Ferro JA, Silveira HCS, Marini DC, Lemos EGM, Monteiro-Vitorello CB, Tambor JHM, Carraro DM, Roberto PG, Martins VG, Goldman GH, de Oliveira RC, Truffi D, Colombo CA, Rossi M, de Araujo PG, Sculaccio SA, Angella A, Lima MMA, de Rosa Jr. VE, Siviero F, Coscrato VE, Machado MA, Grivet L, Di Mauro SMZ, Nobrega FG, Menck CFM, Braga MDV, Telles GP, Cara FAA, Pedrosa G, Meidanis J, Arruda P (2003) Analysis and functional annotation of an expressed sequence tag collection for tropical crop sugarcane. Genome Res 13:2725–2735
Vogel J (2008) Unique aspects of the grass cell wall. Curr Opin Plant Biol 3:301–307
Vu JCV, Allen LH Jr, Gesch RW (2006) Up-regulation of photosynthesis and sucrose metabolism enzymes in young expanding leaves of sugarcane under elevated growth CO2. Plant Sci 171:123–131
Vu JCV, Allen LH Jr (2009a) Growth at elevated CO2 delays the adverse effects of drought stress on leaf photosynthesis of the C4 sugarcane. J Plant Physiol 166:107–116
Vu JCV, Allen LH Jr (2009b) Stem juice production of the C4 sugarcane (Saccharum officinarum) is enhanced by growth at double-ambient CO2 and high temperature. J Plant Physiol 166:1141–1151
Wand S, Midgley G, Jones M, Curtis PS (1999) Responses of wild C4 and C3 grass (Poaceae) species to elevated atmospheric CO2 concentration: a meta-analytic test of current theories and perceptions. Glob Change Biol 5:723–741
Wang ML, Goldstein C, Su W, Moore PH, Albert HH (2005) Production of biologically active GM-CSF in sugarcane: a secure biofactory. Transgenic Res 14:167–178
Wei H, Wang ML, Moore PH, Albert HH (2003) Comparative expression analysis of two sugarcane polyubiquitin promoters and flanking sequences in transgenic plants. J Plant Physiol 160:1241–1251
Weng J-K, Li X, Bonawitz ND, Chapple C (2008) Emerging strategies of lignin engineering and degradation for cellulosic biofuel production. Curr Opin Biotechnol 19:166–172
Weng L-X, Deng H, Xu J-L, Li Q, Wang L-H, Jiang Z, Zhang HB, Li Q, Zhang L-H (2006) Regeneration of sugarcane elite breeding lines and engineering of stem borer resistance. Pest Manag Sci 62:178–187
Wenzl P, Carling J, Kudrna D, Jaccoud D, Huttner E, Kleinhofs A, Kilian A (2004) Diversity arrays technology (DarT) for whole genome profiling of barley. Proc Natl Acad Sci USA 101:9915–9920
Weyens G, Ritsema T, Van Dun K, Meyer D, Lommel M, Lathouwers J, Rosquin I, Denys P, Tossens A, Nijs M, Turk S, Gerrits N, Bink S, Walraven B, Lefèbvre M, Smeekens S (2004) Production of tailor-made fructans in sugar beet by expression of onion fructosyltransferase genes. Plant Biotechnol J 2:321–327
Whittaker A, Botha FC (1999) Pyrophosphate: d-fructose-6-phosphate 1-phosphotransferase activity patterns in relation to sucrose storage across sugarcane varieties. Physiol Plant 107:379–386
Woods J (2001) The potential for energy production using sweet sorghum in southern Africa. Energ Sustain Develop 5:31–38
Wu L, Birch RG (2007) Doubled sugar content in sugarcane plants modified to produce a sucrose isomer. Plant Biotechnol J 5:109–117
Wyman CE, Dale BE, Elander RT, Holtzapple M, Ladisch MR, Lee YY (2005) Coordinated development of leading biomass pretreatment technologies. Bioresource Technol 96:1959–1966
Zhu H, Muthukrishnan S, Krishnaveni S, Wilde G, Jeoung JM, Liang GH (1998) Biolistic transformation of sorghum using a rice chitinase gene. J Genet Breed 52:243–252
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We wish to thank several colleagues at Monsanto who made helpful contributions to the content or editing of this review.
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Dante, R.A., Cristofoletti, P.T., Gerhardt, I.R. (2010). Engineering Advantages, Challenges and Status of Sugarcane and other Sugar-Based Biomass Resources. In: Mascia, P., Scheffran, J., Widholm, J. (eds) Plant Biotechnology for Sustainable Production of Energy and Co-products. Biotechnology in Agriculture and Forestry, vol 66. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-13440-1_4
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