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Toxic effects of lead on plants: integrating multi-omics with bioinformatics to develop Pb-tolerant crops

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Abstract

Main conclusion

Lead disrupts plant metabolic homeostasis and key structural elements. Utilizing modern biotechnology tools, it’s feasible to develop Pb-tolerant varieties by discovering biological players regulating plant metabolic pathways under stress.

Abstract

Lead (Pb) has been used for a variety of purposes since antiquity despite its toxic nature. After arsenic, lead is the most hazardous heavy metal without any known beneficial role in the biological system. It is a crucial inorganic pollutant that affects plant biochemical and morpho-physiological attributes. Lead toxicity harms plants throughout their life cycle and the extent of damage depends on the concentration and duration of exposure. Higher levels of lead exposure disrupt numerous key metabolic activities of plants including oxygen-evolving complex, organelles integrity, photosystem II connectivity, and electron transport chain. This review summarizes the detrimental effects of lead toxicity on seed germination, crop growth, and yield, oxidative and ultra-structural alterations, as well as nutrient absorption, transport, and assimilation. Further, it discusses the Pb-induced toxic modulation of stomatal conductance, photosynthesis, respiration, metabolic–enzymatic activity, osmolytes accumulation, and antioxidant activity. It is a comprehensive review that reports on omics-based studies along with morpho-physiological and biochemical modifications caused by lead stress. With advances in DNA sequencing technologies, genomics and transcriptomics are gradually becoming popular for studying Pb stress effects in plants. Proteomics and metabolomics are still underrated and there is a scarcity of published data, and this review highlights both their technical and research gaps. Besides, there is also a discussion on how the integration of omics with bioinformatics and the use of the latest biotechnological tools can aid in developing Pb-tolerant crops. The review concludes with core challenges and research directions that need to be addressed soon.

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Abbreviations

REACH:

Registration, evaluation, authorisation, and restriction of chemicals

Fo :

Initial fluorescence

Fm :

Maximal fluorescence

Fv :

Variable fluorescence

Fv/Fm :

Photochemical yield of photosystem II

Rubisco:

Ribulose-1,5-bisphosphate carboxylase/oxygenase

SQDG:

Sulfoquinovosyldiacylglycerol

LHCII:

Light-harvesting complex II

NRT:

Nitrate transporter

NRT1.1-GFP:

Nitrate transporter1.1-green fluorescent protein

ROS:

Reactive oxygen species

GSH:

Reduced glutathione

AsA:

Ascorbate

GSSG:

Oxidized glutathione

MDHAR:

Monodehydroascorbate reductase

DHAR:

Dehydroascorbate reductase

MDA:

Malondialdehyde

TEM:

Transmission electron microscopy

NR:

Non-redundant protein sequence

PSI RC:

Photosystem I reaction center

PTAL:

Phenylalanine and tyrosine ammonia-lyase

PAL:

Phenylalanine ammonium lyase

4CL:

4-Coumaroyl CoA-ligase

CYP:

Cytochrome P450

CAD:

Cinnamyl alcohol dehydrogenase

CCR:

Cinnamoyl CoA reductase

NAM:

No apical meristem

ATAF:

Arabidopsis thaliana Transcription activator factor

CUC:

Cup-shaped cotyledon

GRSF:

G-rich sequence factor

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Funding

No external funding was received to prepare this manuscript.

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Authors and Affiliations

Authors

Contributions

Conceptualization and design: MZI. Writing original draft: MZI. Preparing illustrations and tables: MZI. Review and editing: JKL, KJS, MWA, MZI. All authors proofread and commented on several versions of the manuscript before approving the final version of it.

Corresponding author

Correspondence to Ju Kyong Lee.

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All authors declare no competing interest.

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Additional information

Communicated by Gerhard Leubner.

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Ilyas, M.Z., Sa, K.J., Ali, M.W. et al. Toxic effects of lead on plants: integrating multi-omics with bioinformatics to develop Pb-tolerant crops. Planta 259, 18 (2024). https://doi.org/10.1007/s00425-023-04296-9

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  • DOI: https://doi.org/10.1007/s00425-023-04296-9

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