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Population genetic structure and marker-trait association studies for Cercospora leaf spot (CLS) resistance in mung bean (Vigna radiata (L.) Wilczek)

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Abstract

Mung bean production is significantly lowered by the biotic stress caused by Cercospora leaf spot (CLS) in various parts of the globe. The most effective way to increase mung beans’ resilience towards this stress is to map the gene(s)/QTL that regulate it and then transfer that gene(s)/QTL to high-yielding mung bean cultivars. A panel population of 90 genotypes was created for the purpose of association mapping to identify the candidate gene(s)/QTL. Classification of the population was accomplished using GenAlEx 6.51b2, TASSEL 5.0 and STRUCTURE V.2.3.4 software, using 66 SSR markers. The stress resistance of the panel population’s genotypes showed a great deal of variance, and linkage disequilibrium was also observed. Two distinct genetic clusters were identified within the population. A significant connection of CLS resistance with markers CEDG006 and CEDG071 was found in marker-trait association study using both the generalized linear model (GLM) and the mixed linear model (MLM). Two novel QTLs controlling CLS resistance were detected and designated as qCls_2 and qCls_8. Furthermore, novel QTLs were also identified for some of the quantitative traits, such as for plant height (qPht_8), for number of clusters (qNcl_6 and qNcl_10), for hundred seed weight (qHsw_3 and qHsw_11) and for yield (qYld_2, qYld_7 and qYld_8) under CLS stress. The novel QTLs obtained from the present investigation could be further validated in diversified mung bean germplasms to understand the stability of the QTLs and then could be introgressed to elite mung bean varieties to develop CLS resistance lines. This study will help the breeding process towards CLS resistance in mung beans using genomic tools.

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Acknowledgements

The authors are indebted to the Department of Agricultural Biotechnology, College of Agriculture, Odisha University of Agriculture and Technology, Bhubaneswar, India, for providing laboratory support for undertaking the experiments.

Funding

This research was funded by Rashtriya Krishi Vikas Yojana (RKVY), Department of Agriculture and Farmers’ Empowerment, Government of Odisha, India, and Odisha University of Agriculture and Technology, Bhubaneswar, India.

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  1. Department of Agricultural Biotechnology, Odisha University of Agriculture and Technology, Bhubaneswar, 751003, India

    Jyoti Prakash Sahoo, Kailash Chandra Samal & Laxmipreeya Behera

  2. Department of Agriculture and Allied Sciences, C.V. Raman Global University, Bhubaneswar, 752054, India

    Jyoti Prakash Sahoo

  3. Department of Plant Breeding and Genetics, Odisha University of Agriculture and Technology, Bhubaneswar, 751003, India

    Devraj Lenka

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Conceptualization, data curation, formal analysis, investigation, methodology, resources, software, visualization, writing original draft: Jyoti Prakash Sahoo; writing review and editing: Jyoti Prakash Sahoo, Laxmipreeya Behera; project administration, supervision, validation: Jyoti Prakash Sahoo, Kailash Chandra Samal, Devraj Lenka. All authors read and approved the final manuscript.

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Sahoo, J.P., Samal, K.C., Lenka, D. et al. Population genetic structure and marker-trait association studies for Cercospora leaf spot (CLS) resistance in mung bean (Vigna radiata (L.) Wilczek). Trop. plant pathol. 48, 303–318 (2023). https://doi.org/10.1007/s40858-023-00565-w

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