Abstract
(MY)6 clusters, with M = Zn and Cd and Y = O, S, Se, form double-layer drum-like structures containing M–Y covalent bonds. The positive regions near the M atoms attract the N atom of both NH3 and NMe3 so as to form a noncovalent M···N bond. This bond is quite strong, with interaction energies exceeding 35 kcal/mol. The bond strength diminishes with reduced electronegativity of the Y atom (O > S > Se) and is stronger for M = Zn than for Cd. Trimethylation of the base enhances the bond strength. The interaction is dominated by the electrostatic component which accounts for some 60–70% of the total attractive force. The interaction increases the highest occupied molecular orbital–lowest unoccupied molecular orbital gap by between 0.1 and 0.2 eV.
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Introduction
Quantum dots (QDs) represent one of the primary frontier subjects of research in the field of nanotechnology. Discovered in 1980 [1], intriguing small nanoparticles (NPs) of diameters in the range of 2–10 nm [2] are characterized by unique physicochemical, electric, and optical properties such as large surface-to-volume ratio, tuneable band gap, diameter-dependent absorption spectrum, and high carrier mobility. These particles are well adapted to play the role of advanced semiconductors and other similar nanoscale devices, and highly useful in a wide range of processes in new technology development, including optical sensing, photocatalysis, energy storage (solar cells), ultrafast optical switches and logic gates, transistors, and even membrane fabrication [3,4,5,6,7,8,9,10,11,12,13,14,15,16]. Due to their size, the applications of QDs are limited to not only industrial but also biomedical purposes, with possible applications in medical imaging, drug delivery, and biosensing [17,18,19,20].
QDs are defined as “containing a variable number of electrons that occupy well-defined, discrete quantum states and have electronic properties intermediate between bulk and discrete fundamental particle” [21]. The designation as “quantum dots” is derived from the notion that their optoelectronic properties are strictly connected with principles of quantum mechanics [21], for example the effect of size on their properties [22]. In general, decreasing the size of the QD crystal increases the difference in energy between the highest valence band and the lowest conduction band, the so-called band gap. Thus, a smaller QD ought to require more energy to excite an electron into the latter band. This effect can be observed as a colour difference that arises in changing the dot size in a given material [21]. The band gap can be tuned via passivation with a ligand or by doping, so as to emit any desired colour of light. The degree of the band gap shift can be described by the Brus quantum mechanics model, taking advantage of the well-known “particle in a box” paradigm [23]. QDs have other interesting features as well, such as broad absorption spectra, high quantum yields, and photochemical robustness [21].
One of the most current and intensively studied nanoparticles within the QD family is the (ZnO)n nanoclusters. As an isolated molecule, zinc oxide is a wide band gap semiconductor with a direct band gap energy and strong excitation binding energy. Combining these properties with the high optical transparency and good stability of this entity provides a huge advantage for ZnO in various electro- and opto-derived applications (e.g. light emitting diodes, light detectors, and gas sensors) [24,25,26,27,28,29]. Several works have described doping procedures applied to various forms of zinc oxide nanoclusters to modify their electrical properties [30,31,32,33]. Recently, time-dependent density functional theory (TD-DFT) calculations of (ZnO)6 nanostructures indicated that substituting O atoms with other chalcogens such as Se or Te atoms offered promise, specifically in biological application [33]. Carbon and sulphur impurities in the (ZnO)6 structure intensely modulated magnetic properties of this QD and widened its highest occupied molecular orbital–lowest unoccupied molecular orbital (HOMO–LUMO) gap [34].
Beside the internal modification of (ZnO)6, there is also evidence that interaction with a ligand has a powerful impact on QD properties. The mechanism of H2O adsorption on the (ZnO)n nanocluster surface was studied by DFT calculations [35, 36] where it was found that the band gap and excitation energy heavily depend on the particular shape of the (ZnO)n (n up to 32) nanocluster. However, adsorption or dissociation of water molecule on the ZnO NP does not introduce substantial changes in these parameters [36]. The authors also discovered that chemisorption is energetically preferred when the Zn atom coordination number is less than four [36]. According to another DFT study concerning adsorption of aliphatic aldehydes on (ZnO)12 clusters, complexation induced considerable changes in the HOMO–LUMO energy gap of the zinc oxide nanocage, which might be useful in sensor design [37]. It was also noted that the adsorption energy decreased upon lengthening the aliphatic chain [37]. Most recently, a series of studies were focused on (ZnY)n structures (n = 6, 28, 30; Y = O, S, Se) [38,39,40,41]. The authors found that attaching SO3 or NO2 molecules to the hollow cubic and hollow spherical (ZnO)28 or (ZnO)30 QDs increases the HOMO–LUMO gap [38]. They also noted that pyridine passivation of the (ZnO)6 nanocluster widens the QD band gap more than any other ligand [39]. The theoretical results conformed nicely with available experimental data [38,39,40,41].
Other studies have been concerned chiefly with conformational analysis of various QDs [42, 43]. Among various possible configurations of (ZnO)6, the “drum” (two parallel stacked six-membered rings) conformer is most stable. Another work considered the correlation between morphology and optoelectronic properties of (ZnO)n and (ZnS)n for n as large as 72 [44]. Other clusters replaced the Zn/O pair by Cd/Se [45,46,47,48] as the latter are easy to fabricate, of low-cost, and susceptible to passivation of the active sites. They have, however, a relatively large band gap in their unmodified conformation which has hampered their practical usage to this point [46].
While there has been substantial study of the synthesis strategies, optoelectronic and physical properties of nanoparticles, and QDs themselves [49,50,51,52,53], the ability of small inorganic molecules to adjust their properties is becoming more evident [34,35,36, 38,39,40,41, 48, 54]. But what is lacking is an understanding of the mechanism by which these perturbations occur. In what precise way do these ligands affect the nanoparticle properties? How might one adjust these perturbations by the proper choice of ligand or of nanoparticle composition and structure? Knowledge of this sort would enable a pathway to the rational design of systems with desirable properties.
As a first step in answering these questions, the current work applies quantum chemical methods to consider a set of small clusters of (MY)6 type, with both Zn and Cd taken as metals M, one below the other in the periodic table. O, S, and Se were considered as chalcogen atoms Y so as to elucidate the role of atomic size and electronegativity. The interacting ligand was taken as NH3 as a common N-base; the effects of alkylation were examined by replacing the three H atoms by methyl groups. Such theoretical model is offered as a step toward understanding the much larger nanoclusters that encompass many more atoms. Specifically, the application of σ-hole model to the QD–ligand interactions topic brings new insights into this issue. In order to elucidate the principles underlying the interaction, many of the tools that have been developed to understand σ-hole interactions [55,56,57,58,59,60,61,62,63,64] are employed here. While typically applied to small organic and inorganic systems, this style of analysis has found useful application with different sorts of metals as well, as for example gold and platinum nanoclusters [65,66,67,68,69,70,71].
As described in detail below, the analysis probes into the nature and magnitudes of the various forces involved in each interaction and their derivation in terms of overall charge distributions and individual orbital interactions. The strengths of individual bonds, covalent as well as noncovalent, are quantified. In addition, the effects of the ligands on the HOMO–LUMO gap are examined in the context of each of these orbitals separate from the other.
Computational details
Geometries of the (MY)6 (M = Zn, Cd; Y = O, S, Se) QDs and their complexes with ammonia and trimethylamine were fully optimized at the B3LYP-D3(BJ) level in conjunction with the def2TZVPP basis set [72,73,74,75]. Another DFT functional, M062X, with the cc-pVTZ basis [76,77,78] set was also used for geometry optimization and energy calculation to ensure consistency of results. These levels of theory were applied in earlier studies of related QDs and metal nanoparticles [37,38,39,40, 42, 79] where they demonstrated their reliability. Harmonic vibrational frequency analysis guaranteed that each optimized structure is a true minimum on the potential energy surface. The interaction energy, Eint, of each complex was computed as the difference in energy between the complex and the sum of monomers within the dimer geometry. Eint was corrected for basis set superposition error (BSSE) via the counterpoise procedure [80]. The deformation energies, Edef, were evaluated as the difference between the electronic energies of monomers (QD and base) within the complex geometry and the electronic energies of fully optimized isolated monomers.
All procedures which did not require external programs (optimization, frequencies, energies) were carried out using the Gaussian 09 code [81]. Energy decomposition analysis (EDA) was performed at the BLYP-D3(BJ)/ZORA/TZ2P level by the ADF modelling suite using optimized DFT geometries [82,83,84,85]. WFA–SAS (Wave Function Analysis–Surface Analysis Suite) was utilized to calculate the MEP (molecular electrostatic potential) on the 0.001 au isodensity surface and to identify its extrema (Vs,max and Vs,min) [86]. To assess the possible orbital interactions between the interacting monomers, NBO analysis was performed using version 5.0 of the GenNBO program [87]. DFT electron densities of complexes were analysed via AIMAll software in order to find the bond critical points (BCPs) and bond paths [88]. The NCI prescription was used to study the magnitude and exact location of the interaction real spaces between QDs and Lewis bases by means of the MultiWFN and VMD programs [89,90,91]. The HOMO–LUMO orbitals were illustrated using Chemcraft software [92].
Results
Isolated quantum dots
Earlier work has demonstrated that the drum conformation (two hexagonal ring layers) represents the global minimum geometry of (MX)6 [34, 42, 43]. Our own calculations confirm this preference, with some qualifications. The drum geometry, which is represented by a pair of planar hexagonal rings lying directly above one another, is illustrated in Fig. 1. Note the “staggered” structure in that O atoms lie directly below M and vice versa. A search of the potential energy surface reveals a number of other minima. As illustrated in Fig. S1, there is a minimum corresponding to a 12-membered single ring, almost but not quite planar. A second structure is somewhat similar but is “pinched in” toward the middle, leading to the close approach of two pairs of Cd/O atoms, labelled here as three 6-4-6 rings. A third minimum is reminiscent of the drum in that there are two layers but differs in that each layer is better described as a pair of four-membered rings than as a hexagon as in the drum. This structure has been dubbed a “cage” in the literature, a designation adopted here as well.
Table S1 indicates the relative energies of these four sorts of structures, optimized at two different levels. M062X/cc-pVTZ verifies the greater stability of the drum, notably lower in energy than the others. On the other hand, B3LYP-D3(BJ)/def2TZVPP suggests that the single ring is more stable than the drum, albeit not by a wide margin. Both levels of theory confirm the much higher energies of the three-ring and cage structures. Given the prevalence of the drum structure in the wurtzite crystalline form [34, 38,39,40], and its prior examination in numerous publications, along with its predicted existence as global minimum by M062X/cc-pVTZ, it was the drum to which the bulk of the calculations described below are devoted.
Analysis of the molecular electrostatic potential (MEP) of (ZnO)6 in Fig. 2 reveals a regular pattern of positive and negative regions of the (MX)6 systems in general. The most positive of these are located near to the M atoms, extending away from the centre of the drum. The maximum of the potential in this region is designated as Vs,max (a). Another, weaker maximum occurs at the top and bottom of each drum, directly over its centre, and designated as Vs,max (b). The numerical values of these extrema collected in Table 1 obey a number of patterns. Firstly, Vs,max (b) on the tops of the drum centre are significantly weaker than Vs,max (a) by a factor of 2–4. Secondly, the intensity of the positive MEP fades as the chalcogen atom is enlarged and its electronegativity diminished: O > S > Se. The Zn-containing QDs have stronger Vs,max (a) than their Cd cousins for any given chalcogen atom Y, but this pattern is reversed for Vs,max (b) where it is Cd that has the stronger secondary maximum.
While there have been no prior evaluations of the MEP surface of these systems, some comparison may be made with related clusters involving the neighboring coinage metals (Cu, Ag, Au) (also known as “regium” abbreviated as Rg). The σ-holes in Cu9, Ag9, and Au9 nanoclusters were of significantly smaller magnitude than those here, ranging between 16.9 and 21.3 kcal/mol [93]. The same metals in smaller Rgn clusters (n = 2–6) [71] presented larger Vs,max of 208 to 44.1 kcal/mol, still smaller than the higher values observed here.
It is anticipated that the most positive regions of the QDs will interact directly with the negative regions of the two Lewis bases. The Vs,min values for ammonia and trimethylamine are − 38.6 and − 30.0 kcal/mol, respectively. On the hypothetical basis of a purely electrostatic interaction, one would thus expect NH3 to form a stronger complex than its trimethylated congener.
Complexes
The optimized geometries of the (MY)6 QDs models complexes with NH3 and NMe3 Lewis bases are all exhibited in Fig. S2, with several sample structures displayed in Fig. 3. Although optimizations were begun with numerous initial positions of the base, all geometries converged on those in Fig. S2, wherein the N atom approached the principal Vs,max (a). In addition to the primary M···N interaction, the geometries suggest the possibility of auxiliary NH···O or even CH···O H-bonds, the influence of which are discussed in detail below.
Some of the chief geometric and energetic aspects of these complexes are reported in Table 2. The intermolecular R(M···N) distances are substantially shorter than the sum of Alvarez van der Waals radii [94] of the corresponding atoms which are 405 and 4.15 Å for the Zn···N and Cd···N pairs, respectively, as would be expected for a significant noncovalent bond. The distances involving Cd are longer than those to Zn, in keeping with the larger radius of the former. The NH3 is generally a little further from the metal atom than is NMe3, by something on the order of 0.01 Å, with the single exception of (CdO)6, which will be discussed below in the context of secondary interactions.
Interaction energies span the range between 20 and 36 kcal/mol. The first obvious trend is the diminishment of interaction energy in the order Y = O > S > Se. The (ZnY)6 complexes are considerably stronger than their Cd counterparts by roughly 4–8 kcal/mol, consistent with the larger values of Vs,max (a) for the former. There is also a clear strengthening (6–8 kcal/mol) that arises from the substitution of the three H atoms of NH3 by methyl groups. Note that this trend stands in stark contrast to Vs,min which is more negative for NH3. The greater stability of NMe3 dimers may be a consequence of (i) secondary interactions and/or (ii) weakening of the hyperconjugation within the base upon complexation. The latter problem was discussed in an earlier work devoted to the chalcogen bonds in complexes between carbon disulphide and methyl- or chloro-ammonia derivatives [95]. Overall, the complexation energies of these complexes are somewhat weaker than heterodimers of water with ZnO nanocluster36 but stronger than (ZnO)m (m = 28–30) complexes with CO [38].
The third and fourth columns of Table 2 document the structural distortions undergone by the QDs upon complexation. The primary deformation is the change in the M–Y bond lengths for the M atom directly involved in the M···N bond. These intramolecular bonds are elongated by something on the order of 0.04 Å, with some variations. For example, the Zn–S bonds in (ZnS)6 show the largest stretches. In concert with the stretch of these two M–Y bonds is a reduction in the angle between them of roughly 8°. These geometric changes, along with others, have an energetic consequence. The deformation energies arising in the QD resulting from the complexation are reported in the penultimate column of Table 2. They are not very large, amounting to 1–3 kcal/mol. Even smaller are the deformation energies within the base molecules in the last column, less than 1 kcal/mol. The larger deformations of the Lewis acid as compared to the base are common in interactions such as these [96, 97]. The distortions are not sufficiently large to substantially modify the MEP of the Lewis acid, as has proven to be the case in certain other situations [97].
Topology of electron density
So as to better understand the electron density (ED) distribution in these complexes, sometimes referred to as the physical manifestation of the forces in interacting systems [98, 99], an AIM analysis of the topology of the ED distribution was carried out. The bond critical point (BCP) contains a good deal of information about the attractive interaction [100]. These BCPs are indicated by the small green dots in Fig. S3, with the set of systems for Y=O displayed as examples in Fig. 4. In addition to the bond paths connecting M with N, some of these systems also contain bond paths that would suggest H-bonds of various types, viz. NH···O, CH···O, CH···S, and even CH···Se. However, as explained below, these latter H-bonds would appear to contribute little to the overall stability of these complexes.
A quantitative description of the AIM analysis is summarized by the data in Table 3. First with respect to the density at the BCP, a value of ρ higher than 0.1 au is commonly taken as an indicator of a covalent bond while the 0.002–0.034 range is typical of H-bonds [100]. The values displayed in the third column of Table 3 for the M···N bonds range from 0.052 to 0.077 au, stronger than a typical H-bond. In those cases where a secondary H-bond is indicated, the value of ρ is much smaller. The largest of these arises from the NH···O H-bond in (CdO)6···NH3 of 0.028, less than half the same quantity for the Cd···N bond. The density is much smaller, only 0.008 au for the other auxiliary H-bonds. The AIM analysis suggests then that the interaction energies can be attributed almost completely to the primary M···N bonds. The patterns in the Laplacian of the density in the next column of Table 3 confirm these ideas. Any contributions arising from the secondary interactions are dwarfed by the primary noncovalent bonds. The total electron energy density (H) reinforces this principle and goes one step further in that H is positive for these putative H-bonds, a sign of a very weak bond [100].
The AIM data fit many of the same patterns as observed in the energetics, falling off in the order O > S > Se, and the Zn complexes are stronger than their Cd sisters. Methylation of the base increases ρ and H, parallel with the enhanced interaction energy. On the other hand, ∇2ρ is less sensitive to the distinction between NH3 and NMe3.
The formation of the complexes also has an internal effect upon the bonding within the QDs. Most important of these are the covalent bonds between the M engaging in the M···N bond and the Y atoms within its same layer (horizontal) and that in the other layer (vertical). The values of both ρ and ∇2ρ for each complex are reported in Table 4, followed by the change they each undergo as a result of this complexation. The densities of all of these internal bonds are diminished by the formation of the complex, indicating a bond weakening. This reduction in ρ is consistent with the aforementioned M–Y bond lengthenings indicated in Table 2. ∇2ρ follows this trend, but not as consistently, with some bonds showing a very small increase.
Another means of analysing the topology of the electron density arises in the context of the NCI (noncovalent index) approach [89, 90, 101]. The implementation of this technique into the analysis of the complexes of interest here gives rise to the diagrams in Fig. S4 wherein strong attractive interactions are colour-coded as blue regions, and weak interactions such as van der Waals forces are indicated by green to light brown and steric repulsions are red. The scatter graphs of the reduced density gradient (RDG) versus the λ2(ρ) parameter are presented next to the coloured isosurfaces maps in Fig. S4. The diagrams verify the presence of the M···N interactions as strong noncovalent bonds, i.e. blue regions. There is also some verification provided as to weak secondary interactions in some of these cases.
NBO analysis
The NBO method facilitates an analysis of the contributions to the interaction energy by charge transfers from one orbital to another via second-order perturbation energies, E(2). In the systems considered here, the primary charge transfer involved in the M···N bonds originates in the lone pair of the Lewis base N atom and finds its way to the σ*(M–Y) antibonding orbitals of the cluster.
The energetic consequence of that transfer is reported in Table 5, along with the total charge transferred (CT) from the entire Lewis base molecule to the cluster. In general, E(2) is rather large, between 19 and 28 kcal/mol, which verifies the strength of this M···N noncovalent bond. The total intermolecular charge shift is also large, more than 0.05 e. Some of the patterns in Table 5 match the energetic ordering of Table 2. Interactions weaken in the expected Y = O > S > Se order, and Zn···N bonds are stronger than their Cd···N analogues. On the other hand, the NBO analysis reveals a higher degree of charge transfer for the NH3 base than for its trimethylated counterpart, opposite to the stronger overall binding of NMe3. One can conclude then that while charge transfer is an undeniably important factor in the noncovalent bonding, it is not decisive in the greater strength arising for the methylated base.
For the most stable complexes with ammonia and trimethylamine, extended analysis of electron density has been performed referring to the orbitals which are involved in the interaction between the QD and Lewis base. The results are collected in Table S3. According to this data, two orbitals are engaged in interaction: antibonding sigma orbitals of (Zn–O) bond and lone electron pair orbital of nitrogen. In ammonia dimer the E(2) interaction energy of 28.10 kcal/mol was found between these orbitals. The σ*(Zn–O) one is formed from an overlap of sp4.59 hybrid on O atom (which is a mixture of 18% s and 82% p atomic orbitals) and the s hybrid on the Zn atom (nearly pure s type—95%). With respect to the lone pair of N atom, it has sp3.74 hybridization (79% p and 21% s character). In the case of trimethylamine complex, the main difference concerns the hybridization of LP(N) which is nearly pure p type (96%). The description of σ*(Zn–O) orbital is very similar to that written for (ZnO)6···NH3 complex as well as occupancies of both orbitals are comparable (about 0.21 e). The amount of interaction energy in the case of complex with NMe3 is smaller than that in the ammonia complex (22.41 kcal/mol) which is in line with the charge transfer in those complexes.
The values of E(2) and CT measured for these complexes are comparable to those found in the regium bonded heterodimers [71] in which Zn and Cd are replaced by Cu, Ag, and Au. In the case of complexes pairing Ag nanoclusters with ammonia and NCH, E(2) varied from 5.3 to 26.3 kcal/mol and CT lied in the range of 2 to 72 m [71]. In similar sorts of complexes between imidazole and gold nanoparticles, the E(2) energies were also comparable to those evaluated here: 31.5, 23.8, and 8.2 kcal/mol for the two-, four-, and ten-membered Au nanoclusters, respectively [102].
Components of total interaction energy
To gain further insight into the nature of the noncovalent bonding, each interaction energy was decomposed into its constituent units. The Morokuma–Ziegler method partitions the total into several parts. The electrostatic energy Eelec represents the interaction between the unperturbed charge distributions of the two subunits, and Eoi contains the interactions between the various orbitals of the two systems, comprising polarization and charge transfer effects, and Edisp represents the London dispersion energy.
As is clear from Table 6, the electrostatic component is uniformly the largest in these complexes, comprising some 62–69% of the total attractive energy. This observation is consistent with the parallel nature of the interaction energy and the values of the extrema of the electrostatic potentials of the individual monomer charge distributions. Note also that Eelec follows the O > S > Se trend, as well as reflecting the stronger bonding of Zn than Cd, and NMe3 over NH3. In other words, all of the energetic patterns are contained within the electrostatic element. Orbital interactions play an important role as well, but generally less than half as much as Eelec, which may account for the trend reversal between interaction energy and NBO charge transfers. Dispersion is a minor factor, accounting for less than 13% of the total. It is uniformly larger for the NMe3 base than for NH3, contributing to the larger interaction energies of the former.
The interaction energy decomposition profile of these complex fits into the overall picture of a wide variety of noncovalent interactions in the literature, even for other decomposition schemes, e.g. SAPT or EDA [71, 95,96,97, 103,104,105,106,107].
HOMO and LUMO orbitals
The highest occupied molecular orbital and lowest unoccupied molecular orbital (HOMO and LUMO) are the relevant, frontier orbitals which are thought to take part in electrical transport and kinetic stability of a molecular system [108]. The phenomenon of QDs is strongly linked with characterization of their HOMO–LUMO system. The energy gap (Eg) between these MOs is a strong factor in their electron transfer capabilities and thus also their potential semiconductive properties. Earlier work has documented that the attachment of an external molecule to the QD surface can influence this energy gap and consequently the optoelectronic properties of the entire system [38]. The strategy of tuning QDs by binding them in complexes with an assortment of ligands could be used in optimizing the QD’s performance.
The effects of the complexation of each QD with the Lewis bases on these orbital energies, as well as their gap, are displayed in Table 7. (The gaps in the uncomplexed monomers are contained in Table S2.) The first two columns of Table 7 show that the interaction with the base raises the energy of both the HOMO and LUMO. But since this energy rise is of larger magnitude for the LUMO, the energy gap is enhanced by some 0.1 to 0.2 eV. There is a general trend for this gap increase to rise in the order O < S < Se and to be larger for Zn than for Cd. The methylation of the base appears to have little effect though.
The last two columns of Table 7 equate the HOMO orbital energy with the ionization potential I (a reflection of Koopman’s theorem) and LUMO energy with the electron affinity A. The largest ionization potential of 6.47 au arises for the (ZnS)6 complexes with either base, so these can be considered the most resistant to electron loss. On the opposite end of the spectrum, with the lowest values of I = 6.05 eV, are the (CdSe)6 complexes. The highest electron affinity, more than 3 eV is associated with the (CdO)6 systems, which can thus be considered the most electrophilic, with (ZnS)6 the least with A < 2.4 eV. To place these quantities in perspective, the electron affinities for isolated Zn and Cd atoms are − 0.6 and − 0.7 eV, respectively [109].
As a visual supplement to the results in this table, and to provide further context, the HOMO and LUMO orbitals of the (ZnO)6···NH3 complex are illustrated as an example in Fig. 5. According to the detailed analysis of canonical molecular orbitals performed for the (ZnO)6···NH3 complex, the HOMO orbital is totally localized on (ZnO)6, and it is a mixture of the five lone pair orbitals of four oxygen atoms. The energy of this orbital was calculated as − 6.38 eV. The LUMO is localized on the QD mainly, and it is composed of five σ*(Zn–O) NBO orbitals. As one can see in Fig. 5, the LUMO orbital is also slightly localized on the Lewis base. It must be stressed here that according to the analysis, contribution of this orbital (coming from ammonia) is negligible (less than 5% and is not even listed in the NBO output file). The energy of the LUMO was calculated as − 2.56 eV, indicating the energy gap between frontier orbitals of 3.83 eV.
The HOMO–LUMO data can be compared with certain prior literature results. For example, the HOMO–LUMO gap reported earlier for the planar form of (ZnO)6 (see Fig. S1) is 2.99 eV [110], considerably smaller than the value calculated here for the drum structure. A gap of 2.91 eV, using the same DFT functional as here, was reported for the much larger (CdSe)3 [46]. Another work [40] considered the effect of doping Co, Fe, and Ni metal atoms into the same set of zinc QDs as discussed here The gaps for the undoped QDs are close to those reported here, despite the use of a different basis set (LanL2DZ vs def2TZVPP here). The calculations found that Eg increases when the number of Co dopants is odd, or when the number of Fe atoms increases, but smaller changes were observed in other cases. Doping by C atoms [34] lowered the gap but the reverse was observed for S atoms.
Perhaps more to the point is the effect of interactions with external ligands. CO, NO2, and SO3 molecules produced varied effects on Eg depending upon the specific binding site of (ZnO)m (m = 28-30) QDs [38]. The greatest gap reduction was associated with the placement of NO2 and SO3 molecules in the centre of the hollow cubic or hollow spherical ZnO QD. More closely akin to our own systems, another DFT study [39] of passivation of (ZnO)6 nanoclusters by ammonia, methanol, methylamine, and pyridine ligands led to the same observation as found here—the band gap widens with ammonia ligand capping, no matter the site of attack The other ligands resulted in band gap variation but with patterns that were less than clear. Finally, it has been found that water molecule adsorption on numerous ZnO QDs yields only small changes in these energy gaps [36].
Conclusions
In summary, (MY)6 quantum dot models engage in strong M···N noncovalent bonds with N-bases. The interaction energies are quite large, as much as 36 kcal/mol. The interaction is comprised to a large extent of a Coulombic attraction which accounts for as much as 70% of the total attraction. This force is supplemented by a smaller component derived from orbital interactions and an even smaller dispersive attraction. Zn engages in a stronger M···N bond than does its Cd counterpart below it in the periodic table, and the interaction weakens with diminishing electronegativity of the chalcogen atom Y = O > S > Se. Replacement of H atoms of the NH3 base by methyl groups enhances the binding as well. Most of these trends are accurately reproduced by electrostatic potentials, AIM analysis of the electron density topology, and NBO measures of charge transfer. But the latter would incorrectly predict a stronger M···N bond for NH3 as compared to NMe3, as would a simple comparison of electrostatic potentials.
There is relatively little monomer geometric deformation that accompanies the complexation, amounting to only 3 kcal/mol or less. The deformations involve chiefly the lengthening of some of the internal M–Y covalent bonds within the QD, coupled with reduction in the associated Y-M–Y bond angles. The complexation of the QD with a base increases the HOMO–LUMO gap by some 5% which will have an effect on its conductivity properties. It is hoped that the results presented here may steer future work related to the development of the new QDs–ligand complexes and the rational design of materials with desired properties based on these superbly tuneable nanoparticles.
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A generous allocation of computer time from the Wroclaw Supercomputer and Networking Center is acknowledged.
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This work was financed in part by a statutory activity subsidy from the Polish Ministry of Science and Higher Education for the Faculty of Chemistry of Wroclaw University of Science and Technology.
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Michalczyk, M., Zierkiewicz, W. & Scheiner, S. Interactions of (MY)6 (M = Zn, Cd; Y = O, S, Se) quantum dots with N-bases. Struct Chem 30, 1003–1014 (2019). https://doi.org/10.1007/s11224-019-01337-6
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DOI: https://doi.org/10.1007/s11224-019-01337-6