Volume 291, Issue 3

Search all Molecular Genetics and Genomics articles

June 2016

38 articles in this issue

Characters, functions and clinical perspectives of long non-coding RNAs
Ruifang Wu
Yuwen Su
Qianjin Lu
Review 17 February 2016 Pages: 1013 - 1033
Identification of important long non-coding RNAs and highly recurrent aberrant alternative splicing events in hepatocellular carcinoma through integrative analysis of multiple RNA-Seq datasets
Lu Zhang
Xiaoqiao Liu
Ronghua Chen
Original Article 28 December 2015 Pages: 1035 - 1051
Dynamic transcriptome analysis reveals AP2/ERF transcription factors responsible for cold stress in rapeseed (Brassica napus L.)
Chunfang Du
Kaining Hu
Tingdong Fu
Original Article 04 January 2016 Pages: 1053 - 1067
Association genetics in Populus reveals the interactions between Pto-miR160a and its target Pto-ARF16
Jiaxing Tian
Jinhui Chen
Deqiang Zhang
Original Article 05 January 2016 Pages: 1069 - 1082
Ribosomal protein genes are highly enriched among genes with allele-specific expression in the interspecific F1 hybrid catfish
Ailu Chen
Ruijia Wang
Zhanjiang Liu
Original Article 08 January 2016 Pages: 1083 - 1093
Loci and candidate gene identification for resistance to Phytophthora sojae via association analysis in soybean [Glycine max (L.) Merr.]
Lihong Li
Na Guo
Han Xing
Original Article 13 January 2016 Pages: 1095 - 1103
Genome-wide identification, classification and expression analysis in fungal–plant interactions of cutinase gene family and functional analysis of a putative ClCUT7 in Curvularia lunata
Tong Liu
Jumei Hou
Yuhu Zuo
Original Article 14 January 2016 Pages: 1105 - 1115
Genetic diversity, population structure and association analysis in cut chrysanthemum (Chrysanthemum morifolium Ramat.)
Pirui Li
Fei Zhang
Fadi Chen
Original Article 16 January 2016 Pages: 1117 - 1125
Different evolutionary patterns of SNPs between domains and unassigned regions in human protein-coding sequences
Erli Pang
Xiaomei Wu
Kui Lin
Original Article Open access 30 January 2016 Pages: 1127 - 1136
Genome-wide analysis of CrRLK1L gene family in Gossypium and identification of candidate CrRLK1L genes related to fiber development
Erli Niu
Caiping Cai
Wangzhen Guo
Original Article 30 January 2016 Pages: 1137 - 1154
A cis-regulatory sequence from a short intergenic region gives rise to a strong microbe-associated molecular pattern-responsive synthetic promoter
Mona Lehmeyer
Erik K. R. Hanko
Reinhard Hehl
Original Article 30 January 2016 Pages: 1155 - 1165
Genome-wide identification, classification, and analysis of NADP-ME family members from 12 crucifer species
Peng Tao
Weiling Guo
Xinmin Zhong
Original Article 02 February 2016 Pages: 1167 - 1180
MuA-mediated in vitro cloning of circular DNA: transpositional autointegration and the effect of MuB
Elsi Pulkkinen
Saija Haapa-Paananen
Harri Savilahti
Original Article 04 February 2016 Pages: 1181 - 1191
The association between the ring finger protein 213 (RNF213) polymorphisms and moyamoya disease susceptibility: a meta-analysis based on case–control studies
Xun-Sha Sun
Jun Wen
Wen-Li Sheng
Original Article 05 February 2016 Pages: 1193 - 1203
NAC transcription factors play an important role in ethylene biosynthesis, reception and signaling of tomato fruit ripening
Xiaohong Kou
Chen Liu
Zhaohui Xue
Original Article 06 February 2016 Pages: 1205 - 1217
Integrated cytogenetics and genomics analysis of transposable elements in the Nile tilapia, Oreochromis niloticus
Guilherme Valente
Thomas Kocher
Cesar Martins
Original Article 09 February 2016 Pages: 1219 - 1225
Comparative analysis of housekeeping and tissue-selective genes in human based on network topologies and biological properties
Lei Yang
Shiyuan Wang
Yingli Lv
Original Article 20 February 2016 Pages: 1227 - 1241
ACC oxidase and miRNA 159a, and their involvement in fresh fruit bunch yield (FFB) via sex ratio determination in oil palm
Suthasinee Somyong
Supannee Poopear
Somvong Tragoonrung
Original Article 20 February 2016 Pages: 1243 - 1257
The grain Hardness locus characterized in a diverse wheat panel (Triticum aestivum L.) adapted to the central part of the Fertile Crescent: genetic diversity, haplotype structure, and phylogeny
Salar Shaaf
Rajiv Sharma
Hakan Özkan
Original Article 22 February 2016 Pages: 1259 - 1275
SNP discovery in common bean by restriction-associated DNA (RAD) sequencing for genetic diversity and population structure analysis
Paula Arielle M. R. Valdisser
Georgios J. Pappas Jr.
Rosana P. Vianello
Original Article 01 March 2016 Pages: 1277 - 1291
Proteomic responses of drought-tolerant and drought-sensitive cotton varieties to drought stress
Haiyan Zhang
Zhiyong Ni
Yanying Qu
Original Article 03 March 2016 Pages: 1293 - 1303
Genome-wide analysis, expression dynamics and varietal comparison of NAC gene family at various developmental stages in Morus notabilis
Vinay Kumar Baranwal
Paramjit Khurana
Original Article 04 March 2016 Pages: 1305 - 1317
Genome-wide identification of WRKY family genes in peach and analysis of WRKY expression during bud dormancy
Min Chen
Qiuping Tan
Dongsheng Gao
Original Article Open access 07 March 2016 Pages: 1319 - 1332
Characterization of DNA methyltransferase and demethylase genes in Fragaria vesca
Tingting Gu
Shuai Ren
Yi Li
Original Article 08 March 2016 Pages: 1333 - 1345
Thioridazine inhibits gene expression control of the cell wall signaling pathway (CWI) in the human pathogenic fungus Paracoccidioides brasiliensis
Daniela Leite Jabes
Ana Claudia de Freitas Oliveira
Luiz R. Nunes
Original Article 08 March 2016 Pages: 1347 - 1362
Identification of putative candidate genes for red rot resistance in sugarcane (Saccharum species hybrid) using LD-based association mapping
Ram K. Singh
Nandita Banerjee
Andrew H. Paterson
Original Article 09 March 2016 Pages: 1363 - 1377
Telomere length change plateaus at 4 years of age in Latino children: associations with baseline length and maternal change
Janet M. Wojcicki
Stephen Shiboski
Elissa Epel
Original Article 10 March 2016 Pages: 1379 - 1389
High-resolution genetic linkage mapping, high-temperature tolerance and growth-related quantitative trait locus (QTL) identification in Marsupenaeus japonicus
Xia Lu
Sheng Luan
Jie Kong
Original Article 10 March 2016 Pages: 1391 - 1405
Origin of B chromosomes in the genus Astyanax (Characiformes, Characidae) and the limits of chromosome painting
Duílio M. Z. de A. Silva
Sandro Natal Daniel
Fausto Foresti
Original Article 16 March 2016 Pages: 1407 - 1418
RUDI, a short interspersed element of the V-SINE superfamily widespread in molluscan genomes
Andrea Luchetti
Eva Šatović
Miroslav Plohl
Original Article 17 March 2016 Pages: 1419 - 1429
Molecular characterization of Sp110 gene in pigs
Li-zu Li
Qiu-shi Wang
Xiu-qin Yang
Original Article 19 March 2016 Pages: 1431 - 1442
Two novel copy number variations involving the α-globin gene cluster on chromosome 16 cause thalassemia in two Chinese families
Lingling Hu
Xuan Shang
Xiangmin Xu
Original Article 21 March 2016 Pages: 1443 - 1450
Genome-wide analysis and expression patterns of ZF-HD transcription factors under different developmental tissues and abiotic stresses in Chinese cabbage
Wenli Wang
Peng Wu
XiLin Hou
Original Article 06 November 2015 Pages: 1451 - 1464
Erratum to: Genome-wide analysis and expression patterns of ZF-HD transcription factors under different developmental tissues and abiotic stresses in Chinese cabbage
Wenli Wang
Peng Wu
XiLin Hou
Erratum 10 March 2016 Pages: 1465 - 1465
Sequences enhancing cassava mosaic disease symptoms occur in the cassava genome and are associated with South African cassava mosaic virus infection
A. T. Maredza
F. Allie
M. E. C. Rey
Original Paper 29 April 2015 Pages: 1467 - 1485
Erratum to: Sequences enhancing cassava mosaic disease symptoms occur in the cassava genome and are associated with South African cassava mosaic virus infection
A. T. Maredza
F. Allie
M. E. C. Rey
Erratum 24 March 2016 Pages: 1487 - 1487
Expression of concern: Sequences enhancing cassava mosaic disease symptoms occur in the cassava genome and are associated with South African cassava mosaic virus infection by A. T. Maredza, F. Allie, G. Plata, M. E. C. Rey
Stefan Hohmann
Expression of Concern 27 April 2016 Pages: 1489 - 1489
Single-locus enrichment without amplification for sequencing and direct detection of epigenetic modifications
Thang T. Pham
Jun Yin
Jeremiah W. Hanes
Methods Paper 29 January 2016 Pages: 1491 - 1504

Volume 291, Issue 3

Characters, functions and clinical perspectives of long non-coding RNAs

Identification of important long non-coding RNAs and highly recurrent aberrant alternative splicing events in hepatocellular carcinoma through integrative analysis of multiple RNA-Seq datasets

Dynamic transcriptome analysis reveals AP2/ERF transcription factors responsible for cold stress in rapeseed (Brassica napus L.)

Association genetics in Populus reveals the interactions between Pto-miR160a and its target Pto-ARF16

Ribosomal protein genes are highly enriched among genes with allele-specific expression in the interspecific F1 hybrid catfish

Loci and candidate gene identification for resistance to Phytophthora sojae via association analysis in soybean [Glycine max (L.) Merr.]

Genome-wide identification, classification and expression analysis in fungal–plant interactions of cutinase gene family and functional analysis of a putative ClCUT7 in Curvularia lunata

Genetic diversity, population structure and association analysis in cut chrysanthemum (Chrysanthemum morifolium Ramat.)

Different evolutionary patterns of SNPs between domains and unassigned regions in human protein-coding sequences

Genome-wide analysis of CrRLK1L gene family in Gossypium and identification of candidate CrRLK1L genes related to fiber development

A cis-regulatory sequence from a short intergenic region gives rise to a strong microbe-associated molecular pattern-responsive synthetic promoter

Genome-wide identification, classification, and analysis of NADP-ME family members from 12 crucifer species

MuA-mediated in vitro cloning of circular DNA: transpositional autointegration and the effect of MuB

The association between the ring finger protein 213 (RNF213) polymorphisms and moyamoya disease susceptibility: a meta-analysis based on case–control studies

NAC transcription factors play an important role in ethylene biosynthesis, reception and signaling of tomato fruit ripening

Integrated cytogenetics and genomics analysis of transposable elements in the Nile tilapia, Oreochromis niloticus

Comparative analysis of housekeeping and tissue-selective genes in human based on network topologies and biological properties

ACC oxidase and miRNA 159a, and their involvement in fresh fruit bunch yield (FFB) via sex ratio determination in oil palm

The grain Hardness locus characterized in a diverse wheat panel (Triticum aestivum L.) adapted to the central part of the Fertile Crescent: genetic diversity, haplotype structure, and phylogeny

SNP discovery in common bean by restriction-associated DNA (RAD) sequencing for genetic diversity and population structure analysis

Proteomic responses of drought-tolerant and drought-sensitive cotton varieties to drought stress

Genome-wide analysis, expression dynamics and varietal comparison of NAC gene family at various developmental stages in Morus notabilis

Genome-wide identification of WRKY family genes in peach and analysis of WRKY expression during bud dormancy

Characterization of DNA methyltransferase and demethylase genes in Fragaria vesca

Thioridazine inhibits gene expression control of the cell wall signaling pathway (CWI) in the human pathogenic fungus Paracoccidioides brasiliensis

Identification of putative candidate genes for red rot resistance in sugarcane (Saccharum species hybrid) using LD-based association mapping

Telomere length change plateaus at 4 years of age in Latino children: associations with baseline length and maternal change

High-resolution genetic linkage mapping, high-temperature tolerance and growth-related quantitative trait locus (QTL) identification in Marsupenaeus japonicus

Origin of B chromosomes in the genus Astyanax (Characiformes, Characidae) and the limits of chromosome painting

RUDI, a short interspersed element of the V-SINE superfamily widespread in molluscan genomes

Molecular characterization of Sp110 gene in pigs

Two novel copy number variations involving the α-globin gene cluster on chromosome 16 cause thalassemia in two Chinese families

Genome-wide analysis and expression patterns of ZF-HD transcription factors under different developmental tissues and abiotic stresses in Chinese cabbage

Erratum to: Genome-wide analysis and expression patterns of ZF-HD transcription factors under different developmental tissues and abiotic stresses in Chinese cabbage

Sequences enhancing cassava mosaic disease symptoms occur in the cassava genome and are associated with South African cassava mosaic virus infection

Erratum to: Sequences enhancing cassava mosaic disease symptoms occur in the cassava genome and are associated with South African cassava mosaic virus infection

Expression of concern: Sequences enhancing cassava mosaic disease symptoms occur in the cassava genome and are associated with South African cassava mosaic virus infection by A. T. Maredza, F. Allie, G. Plata, M. E. C. Rey

Single-locus enrichment without amplification for sequencing and direct detection of epigenetic modifications

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