Abstract
In recent years, there has been an increase in studies aimed at the valorization and recycling of materials, such as by-products, wastewater, and residues from industries and agriculture to produce value-added products such as biogas and biofertilizers. Anaerobic digestion (AD) is considered the main biological route to obtain value-added compounds. AD technology allows the action of microorganisms in four steps whose syntrophic activity of microbial communities transform substrates into biogas without needing to add chemicals, involving low investment, and operating costs. Moreover, there is a variety of substrates that can be used to generate high-value products from AD. In order to better conduct the AD process, several anaerobic digestion technologies have been proposed over the years varying from conventional systems to high-rate reactors and recently co-digestion and soli-state processes. However, understanding and knowing the role of microbial populations involved in AD have become extremely important to promote a better control of anaerobic systems. In addition, it ensures nutritional and operational conditions to favor the biochemical route for the biomethane generation. Therefore, research opportunities regarding the syntrophic metabolism that occurs throughout each step of the microbial degradation is essential for anaerobic decomposition of many substrates and the stability of biogas production. This type of scientific study can help to improve the sustainability and energy balance from using material that is being discarded in the environment.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Affes M, Aloui F, Hadrich F, Loukil S, Sayadi S (2017) Effect of bacterial lipase on anaerobic co-digestion of slaughterhouse wastewater and grease in batch condition and continuous fixed-bed reactor. Lipids Health Dis 16:1–8. https://doi.org/10.1186/s12944-017-0587-2
Ahmad T, Aadil RM, Ahmed H, Rahman U, Soares BCV, Souza SLQ, Pimentel TC, Scudino H, Guimarães JT, Esmerino EA, Freitas MQ, Almada RB, Vendramel SMR, Silva MC, Cruz AG (2019) Treatment and utilization of dairy industrial waste: a review. Trends Food Sci Technol 88:361–372. https://doi.org/10.1016/j.tifs.2019.04.003
Ahmed PM, Fernández PM, de Figueroa LIC, Pajot HF (2019) Exploitation alternatives of olive mill wastewater: production of value-added compounds useful for industry and agriculture. Biofuel Res J 6:980–994. https://doi.org/10.18331/BRJ2019.6.2.4
Ahring BK (1994) Status on science and application of thermophilic anaerobic digestion. Water Sci Technol 30:241–249
Alibardi L, Cossu R (2016) Effects of carbohydrate, protein and lipid content of organic waste on hydrogen production and fermentation products. Waste Manag 47:69–77. https://doi.org/10.1016/j.wasman.2015.07.049
Alves MM, Pereira MA, Sousa DZ, Cavaleiro AJ, Picavet M, Smidt H, Stams AJM (2009) Waste lipids to energy: how to optimize methane production from long-chain fatty acids (LCFA). Microb Biotechnol 2:538–550. https://doi.org/10.1111/j.1751-7915.2009.00100.x
Amani T, Nosrati M, Sreekrishnan TR (2010) Anaerobic digestion from the viewpoint of microbiological, chemical, and operational aspects - a review. Environ Rev 18:255–278. https://doi.org/10.1139/A10-011
Amani T, Nosrati M, Mousavi SM, Elyasi S (2015) Study of microbiological and operational parameters in thermophilic syntrophic degradation of volatile fatty acids in an upflow anaerobic sludge blanket reactor. J Environ Chem Eng 3:507–514. https://doi.org/10.1016/j.jece.2014.12.016
Amon T, Amon B, Kryvoruchko V, Bodiroza V, Pötsch E, Zollitsch W (2006) Optimising methane yield from anaerobic digestion of manure: effects of dairy systems and of glycerine supplementation. Int Congr Ser 1293:217–220. https://doi.org/10.1016/j.ics.2006.03.007
Angelidaki I, Chen X, Cui J, Kaparaju P, Ellegaard L (2006) Thermophilic anaerobic digestion of source-sorted organic fraction of household municipal solid waste: start-up procedure for continuously stirred tank reactor. Water Res 40:2621–2628. https://doi.org/10.1016/j.watres.2006.05.015
Angelidaki I, Karakashev D, Batstone DJ, Plugge CM, Stams AJM (2011) Biomethanation and its potential. In: Methods in enzymology. Elsevier Inc., Amsterdam, pp 327–351. https://doi.org/10.1016/B978-0-12-385112-3.00016-0
Apergis N, Chang T, Gupta R, Ziramba E (2016) Hydroelectricity consumption and economic growth nexus: evidence from a panel of ten largest hydroelectricity consumers. Renew Sust Energ Rev 62:318–325. https://doi.org/10.1016/j.rser.2016.04.075
Astals S, Ariso M, Galí A, Mata-Alvarez J (2011) Co-digestion of pig manure and glycerine: experimental and modelling study. J Environ Manag 92:1091–1096. https://doi.org/10.1016/j.jenvman.2010.11.014
Azbar N, Çetinkaya Dokgöz FT, Keskin T, Korkmaz KS, Syed HM (2009) Continuous fermentative hydrogen production from cheese whey wastewater under thermophilic anaerobic conditions. Int J Hydrogen Energy 34:7441–7447. https://doi.org/10.1016/j.ijhydene.2009.04.032
Aziz MM, Kassim KA, ElSergany M, Anuar S, Jorat ME, Yaacob H, Ahsan A, Imteaz MA, Arifuzzaman (2020) Recent advances on palm oil mill effluent (POME) pretreatment and anaerobic reactor for sustainable biogas production. Renew Sust Energ Rev 119:109603. https://doi.org/10.1016/j.rser.2019.109603
Azman, S., Khadem, A.F., Van Lier, J.B., Zeeman, G., Plugge, C.M., 2015. Presence and role of anaerobic hydrolytic microbes in conversion of lignocellulosic biomass for biogas production. Crit Rev Environ Sci Technol 45, 2523–2564. https://doi.org/10.1080/10643389.2015.1053727
Baena S, Fardeau M-L, Ollivier B, Labat M, Thomas P, Garcia J-L, Patel BKC (1999) Aminomonas paucivorans gen. Nov., sp. nov., a mesophilic, anaerobic, amino-acid-utilizing bacterium. Int J Syst Evol Microbiol 49:975–982. https://doi.org/10.1099/00207713-49-3-975
Baena S, Fardeau ML, Labat M, Ollivier B, Garcia JL, Patel BK (2000) Aminobacterium mobile sp. nov., a new anaerobic amino-acid-degrading bacterium. Int J Syst Evol Microbiol 50:259–264. https://doi.org/10.1099/00207713-50-1-259
Balk M, Weijma J, Stams AJM (2002) Thermotoga lettingae sp. nov., a novel thermophilic, methanol-degrading bacterium isolated from a thermophilic anaerobic reactor. Int J Syst Evol Microbiol 52:1361–1368. https://doi.org/10.1099/00207713-52-4-1361
Banks CJ, Zhang Y, Jiang Y, Heaven S (2012) Trace element requirements for stable food waste digestion at elevated ammonia concentrations. Bioresour Technol 104:127–135. https://doi.org/10.1016/j.biortech.2011.10.068
Barber WP, Stuckey DC (1998) The influence of start-up strategies on the performance of an anaerobic baffled reactor. Environ Technol 19:489–501. https://doi.org/10.1080/09593331908616705
Barber WP, Stuckey DC (1999) The use of the anaerobic baffled reactor (ABR) for wastewater treatment: a review. Water Resour 33:1559–1578
Bassani I, Kougias PG, Treu L, Angelidaki I (2015) Biogas upgrading via hydrogenotrophic methanogenesis in two-stage continuous stirred tank reactors at mesophilic and thermophilic conditions. Environ Sci Technol 49:12585–12593. https://doi.org/10.1021/acs.est.5b03451
Basset N, Santos E, Dosta J, Mata-Álvarez J (2016) Start-up and operation of an AnMBR for winery wastewater treatment. Ecol Eng 86:279–289. https://doi.org/10.1016/j.ecoleng.2015.11.003
Bedoić R, Špehar A, Puljko J, Čuček L, Ćosić B, Pukšec T, Duić N (2020) Opportunities and challenges: experimental and kinetic analysis of anaerobic co-digestion of food waste and rendering industry streams for biogas production. Renew Sust Energ Rev 130:109951. https://doi.org/10.1016/j.rser.2020.109951
Beneragama N, Iwasaki M, Umetsu K (2017) Methane production from thermophilic co-digestion of dairy manure and waste milk obtained from therapeutically treated cows. Anim Sci J 88:401–409. https://doi.org/10.1111/asj.12624
Bialek K, Kumar A, Mahony T, Lens PNL, O’Flaherty V (2012) Microbial community structure and dynamics in anaerobic fluidized-bed and granular sludge-bed reactors: influence of operational temperature and reactor configuration. Microb Biotechnol 5:738–752. https://doi.org/10.1111/j.1751-7915.2012.00364.x
Bohutskyi P, Bouwer EJ (2013) Biogas production from algae and cyanobacteria through anaerobic digestion: a review, analysis, and research needs. In: Lee J (ed) Advanced biofuels and bioproducts. Springer, New York, pp 1–1122. https://doi.org/10.1007/978-1-4614-3348-4
Bong CPC, Lim LY, Lee CT, Klemeš JJ, Ho CS, Ho WS (2018) The characterisation and treatment of food waste for improvement of biogas production during anaerobic digestion – a review. J Clean Prod 172:1545–1558. https://doi.org/10.1016/j.jclepro.2017.10.199
Boonapatcharoen N, Meepian K, Chaiprasert P, Techkarnjanaruk S (2007) Molecular monitoring of microbial population dynamics during operational periods of anaerobic hybrid reactor treating cassava starch wastewater. Microb Ecol 54:21–30. https://doi.org/10.1007/s00248-006-9161-6
Bulak P, Proc K, Pawłowska M, Kasprzycka A, Berus W, Bieganowski A (2020) Biogas generation from insects breeding post production wastes. J Clean Prod 244:118777. https://doi.org/10.1016/j.jclepro.2019.118777
Campanaro, S., Treu, L., Kougias, P.G., De Francisci, D., Valle, G., Angelidaki, I., 2016. Metagenomic analysis and functional characterization of the biogas microbiome using high throughput shotgun sequencing and a novel binning strategy. Biotechnol Biofuels 9, 26. https://doi.org/10.1186/s13068-016-0441-1
Carballa M, Regueiro L, Lema JM (2015) Microbial management of anaerobic digestion : exploiting the microbiome-functionality nexus. Curr Opin Biotechnol 33:103–111. https://doi.org/10.1016/j.copbio.2015.01.008
Cesaro A, Belgiorno V (2014) Pretreatment methods to improve anaerobic biodegradability of organic municipal solid waste fractions. Chem Eng J 240:24–37. https://doi.org/10.1016/j.cej.2013.11.055
Chachkhiani M, Dabert P, Abzianidze T, Partskhaladze G, Tsiklauri L, Dudauri T, Godon JJ (2004) 16S rDNA characterisation of bacterial and archaeal communities during start-up of anaerobic thermophilic digestion of cattle manure. Bioresour Technol 93:227–232. https://doi.org/10.1016/j.biortech.2003.11.005
Chan YJ, Chong MF, Law CL, Hassell DG (2009) A review on anaerobic–aerobic treatment of industrial and municipal wastewater. Chem Eng J 155:1–18. https://doi.org/10.1016/J.CEJ.2009.06.041
Chelliapan S, Wilby T, Yuzir A, Sallis PJ (2011) Influence of organic loading on the performance and microbial community structure of an anaerobic stage reactor treating pharmaceutical wastewater. Desalination 271:257–264. https://doi.org/10.1016/j.desal.2010.12.045
Chen R, Roos MM, Zhong Y, Marsh T, Roman MB, Hernandez Ascencio W, Uribe L, Uribe Lorio L, Kirk D, Reinhold DM, Miranda Chavarria JA, Baudrit Ruiz D, Pereira JFA, Montero WR, Srivastava A, Liao W (2016) Responses of anaerobic microorganisms to different culture conditions and corresponding effects on biogas production and solid digestate quality. Biomass Bioenergy 85:84–93. https://doi.org/10.1016/j.biombioe.2015.11.028
Cheng Y, Shi Q, Sun R, Liang D, Li Y, Li Y, Jin W, Zhu W (2018) The biotechnological potential of anaerobic fungi on fiber degradation and methane production. World J Microbiol Biotechnol 34:155. https://doi.org/10.1007/s11274-018-2539-z
Chernicharo CAL (2007) Anaerobic reactors, 1st edn. Water Intelligence Online. IWA Publishing, London. https://doi.org/10.2166/9781780402116
Cho K, Lee J, Kim W, Hwang S (2013) Behavior of methanogens during start-up of farm-scale anaerobic digester treating swine wastewater. Process Biochem 48:1441–1445. https://doi.org/10.1016/j.procbio.2013.04.016
Chouari R, Le Paslier D, Daegelen P, Ginestet P, Weissenbach J, Sghir A (2005) Novel predominant archaeal and bacterial groups revealed by molecular analysis of an anaerobic sludge digester. Environ Microbiol 7:1104–1115. https://doi.org/10.1111/j.1462-2920.2005.00795.x
Chowdhury T, Chowdhury H, Hossain N, Ahmed A, Hossen MS, Chowdhury P, Thirugnanasambandam M, Saidur R (2020) Latest advancements on livestock waste management and biogas production: Bangladesh’s perspective. J Clean Prod 272:122818. https://doi.org/10.1016/j.jclepro.2020.122818
CIBIOGÁS - Centro Internacional de Energias Renováveis – Biogás (2019) Panorama do biogás no Brasil em: 2018
Cirne DG, Paloumet X, Björnsson L, Alves MM, Mattiasson B (2007) Anaerobic digestion of lipid-rich waste-effects of lipid concentration. Renew Energy 32:965–975. https://doi.org/10.1016/j.renene.2006.04.003
Cord-Ruwisch R, Seitz HJ, Conrad R (1988) The capacity of hydrogenotrophic anaerobic bacteria to compete for traces of hydrogen depends on the redox potential of the terminal electron acceptor. Arch Microbiol 149:350–357. https://doi.org/10.1007/BF00411655
Costa KC, Leigh JA (2014) Metabolic versatility in methanogens. Curr Opin Biotechnol 29:70–75. https://doi.org/10.1016/j.copbio.2014.02.012
Cuetos MJ, Gómez X, Otero M, Morán A (2008) Anaerobic digestion of solid slaughterhouse waste (SHW) at laboratory scale: influence of co-digestion with the organic fraction of municipal solid waste (OFMSW). Biochem Eng J 40:99–106. https://doi.org/10.1016/j.bej.2007.11.019
Damasceno LHS, Ratusznei SM, Zaiat M, Foresti E (2008) Effect of mixing mode on the behavior of an ASBBR with immobilized biomass in the treatment of cheese whey. Brazil J Chem Eng 25:291–298
Dasa KT, Westman SY, Millati R, Cahyanto MN, Taherzadeh MJ, Niklasson C (2016) Inhibitory effect of long-chain fatty acids on biogas production and the protective effect of membrane bioreactor. Biomed Res Int:2016. https://doi.org/10.1155/2016/7263974
de Aquino SF, Chernicharo CAL (2005) Acúmulo de ácidos graxos voláteis (AGVs) em reatores anaeróbios sob estresse: causas e estratégias de controle. Eng Sanit e Ambient 10:152–161. https://doi.org/10.1590/s1413-41522005000200009
De Araujo MM, Gaudencio BO, Ayabe DN, Zaiat M (2016) Evaluation of an innovative anaerobic bioreactor with fixed-structured bed (ABFSB) for brewery wastewater treatment. Brazil J Chem Eng 33:733–741. https://doi.org/10.1590/0104-6632.20160334s20150288
De Gioannis G, Muntoni A, Polettini A, Pomi R (2013) A review of dark fermentative hydrogen production from biodegradable municipal waste fractions. Waste Manag 33:1345–1361. https://doi.org/10.1016/j.wasman.2013.02.019
De La Rubia MA, Perez M, Romero LI, Sales D (2006) Effect of solids retention time (SRT) on pilot scale anaerobic thermophilic sludge digestion. Process Biochem 41:79–86. https://doi.org/10.1016/j.procbio.2005.03.073
De La Rubia MA, Riau V, Raposo F, Borja R (2013) Thermophilic anaerobic digestion of sewage sludge: Focus on the influence of the start-up. A review. Crit Rev Biotechnol 33:448–460. https://doi.org/10.3109/07388551.2012.726962
De Vrieze J, Hennebel T, Boon N, Verstraete W (2012) Methanosarcina: the rediscovered methanogen for heavy duty biomethanation. Bioresour Technol 112:1–9. https://doi.org/10.1016/j.biortech.2012.02.079
De Vrieze J, Pinto AJ, Sloan WT, Ijaz UZ (2018) The active microbial community more accurately reflects the anaerobic digestion process: 16S rRNA (gene) sequencing as a predictive tool. Microbiome 6:63. https://doi.org/10.1186/s40168-018-0449-9
Deublein D, Steinhauser A (2010) Bioreactions. In: Biogas from waste and renewable resources. Wiley Online Books, New York. https://doi.org/10.1002/9783527632794.ch10
Ding S-Y, Liu Y-S, Zeng Y, Himmel ME, Baker JO, Bayer EA (2012) How does plant cell wall nanoscale architecture correlate with enzymatic digestibility? Science 338:1055LP–1060. https://doi.org/10.1126/science.1227491
Divya D, Gopinath LR, Merlin Christy P (2015) A review on current aspects and diverse prospects for enhancing biogas production in sustainable means. Renew Sust Energ Rev 42:690–699. https://doi.org/10.1016/j.rser.2014.10.055
Dollhofer V, Podmirseg SM, Callaghan TM, Griffith GW, Fliegerová K (2015) Anaerobic fungi and their potential for biogas production. In: Guebitz GM, Bauer A, Bochmann G, Gronauer A, Weiss S (eds) Biogas science and technology. Springer International Publishing, Cham, pp 41–61. https://doi.org/10.1007/978-3-319-21993-6_2
Drake HL, Gößner AS, Daniel SL (2008) Old Acetogens, new light. Ann N Y Acad Sci 1125:100–128. https://doi.org/10.1196/annals.1419.016
EBA (2019) Annual statistical report of the European biogas association. European Biogas Association
Edwards J, Othman M, Crossin E, Burn S (2017) Anaerobic co-digestion of municipal food waste and sewage sludge: a comparative life cycle assessment in the context of a waste service provision. Bioresour Technol 223:237–249. https://doi.org/10.1016/j.biortech.2016.10.044
Elalami D, Carrere H, Monlau F, Abdelouahdi K, Oukarroum A, Barakat A (2019) Pretreatment and co-digestion of wastewater sludge for biogas production: recent research advances and trends. Renew Sust Energ Rev 114:109287. https://doi.org/10.1016/j.rser.2019.109287
Enzmann F, Mayer F, Rother M, Holtmann D (2018) Methanogens: biochemical background and biotechnological applications. AMB Express 8:1. https://doi.org/10.1186/s13568-017-0531-x
Erguder TH, Tezel U, Guven E, Demirer GN (2001) Anaerobic biotransformation and methane generation potential of cheese whey in batch and UASB reactors. Waste Manag 21:643–650
Esposito G, Frunzo L, Giordano A, Liotta F, Panico A, Pirozzi F (2012) Anaerobic co-digestion of organic wastes. Rev Environ Sci Biotechnol 11:325–341. https://doi.org/10.1007/s11157-012-9277-8
Ferguson RMW, Coulon F, Villa R (2018) Understanding microbial ecology can help improve biogas production in AD. Sci Total Environ 642:754–763. https://doi.org/10.1016/j.scitotenv.2018.06.007
Ferry JG (2011) Fundamentals of methanogenic pathways that are key to the biomethanation of complex biomass. Curr Opin Biotechnol 22:351–357. https://doi.org/10.1016/j.copbio.2011.04.011
Fitamo T, Treu L, Boldrin A, Sartori C, Angelidaki I, Scheutz C (2017) Microbial population dynamics in urban organic waste anaerobic co-digestion with mixed sludge during a change in feedstock composition and different hydraulic retention times. Water Res 118:261–271. https://doi.org/10.1016/j.watres.2017.04.012
Foresti E, Zaiat M, Vallero M (2006) Anaerobic processes as the core technology for sustainable domestic wastewater treatment: consolidated applications, new trends, perspectives, and challenges. Rev Environ Sci Biotechnol 5:3–19. https://doi.org/10.1007/s11157-005-4630-9
Forster-Carneiro T, Pérez M, Romero LI (2008) Influence of total solid and inoculum contents on performance of anaerobic reactors treating food waste. Bioresour Technol 99:6994–7002. https://doi.org/10.1016/j.biortech.2008.01.018
Galagan JE, Nusbaum C, Roy A, Endrizzi MG, Macdonald P, FitzHugh W, Calvo S, Engels R, Smirnov S, Atnoor D, Brown A, Allen N, Naylor J, Stange-Thomann N, DeArellano K, Johnson R, Linton L, McEwan P, McKernan K, Talamas J, Tirrell A, Ye W, Zimmer A, Barber RD, Cann I, Graham DE, Grahame DA, Guss AM, Hedderich R, Ingram-Smith C, Kuettner HC, Krzycki JA, Leigh JA, Li W, Liu J, Mukhopadhyay B, Reeve JN, Smith K, Springer TA, Umayam LA, White O, White RH, Conway de Macario E, Ferry JG, Jarrell KF, Jing H, Macario AJL, Paulsen I, Pritchett M, Sowers KR, Swanson RV, Zinder SH, Lander E, Metcalf WW, Birren B (2002) The genome of M. acetivorans reveals extensive metabolic and physiological diversity. Genome Res 12:532–542. https://doi.org/10.1101/gr.223902
Gerardi MH (2003) The microbiology of anaerobic digesters. The microbiology of anaerobic digesters. John Wiley & Sons, New York. https://doi.org/10.1002/0471468967
Goberna M, Gadermaier M, García C, Wett B, Insam H (2010) Adaptation of methanogenic communities to the cofermentation of cattle excreta and olive mill wastes at 37°c and 55°c. Appl Environ Microbiol 76:6564–6571. https://doi.org/10.1128/AEM.00961-10
Grangeiro, L.C., de Almeida, S.G.C., Mello, B.S. de, Fuess, L.T., Sarti, A., Dussán, K.J., 2019. New trends in biogas production and utilization. Sustain Bioenergy 199–223. https://doi.org/10.1016/B978-0-12-817654-2.00007-1
Gunaseelan VN (1997) Anaerobic digestion of biomass for methane production: a review. Biomass Bioenergy 13:83–114. https://doi.org/10.1016/S0961-9534(97)00020-2
Hahnke S, Langer T, Koeck DE, Klocke M (2016) Description of Proteiniphilum saccharofermentans sp. nov., Petrimonas mucosa sp. nov. and Fermentimonas caenicola gen. nov., sp. nov., isolated from mesophilic laboratory-scale biogas reactors, and emended description of the genus Proteiniphilum. Int J Syst Evol Microbiol 66:1466–1475. https://doi.org/10.1099/ijsem.0.000902
Hahnke S, Langer T, Klocke M (2018) Proteiniborus indolifex sp. nov., isolated from a thermophilic industrial-scale biogas plant. Int J Syst Evol Microbiol 68:824–828. https://doi.org/10.1099/ijsem.0.002591
Haider MR, Zeshan, Yousaf S, Malik RN, Visvanathan C (2015) Effect of mixing ratio of food waste and rice husk co-digestion and substrate to inoculum ratio on biogas production. Bioresour Technol 190:451–457. https://doi.org/10.1016/j.biortech.2015.02.105
Harper S, Pohland F (1987) Enhancement of anaerobic treatment efficiency through process modification. J Water Pollut Control Fed 59:152–161
Hassa J, Maus I, Off S, Pühler A, Scherer P, Klocke M, Schlüter A (2018) Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants. Appl Microbiol Biotechnol 102:5045–5063. https://doi.org/10.1007/s00253-018-8976-7
He Q, Li L, Zhao X, Qu L, Wu D, Peng X (2017) Investigation of foaming causes in three mesophilic food waste digesters: reactor performance and microbial analysis. Sci Rep 7:13701. https://doi.org/10.1038/s41598-017-14258-3
Heeg K, Pohl M, Sontag M, Mumme J, Klocke M, Nettmann E (2014) Microbial communities involved in biogas production from wheat straw as the sole substrate within a two-phase solid-state anaerobic digestion. Syst Appl Microbiol 37:590–600. https://doi.org/10.1016/j.syapm.2014.10.002
Hernandez-Eugenio G, Fardeau M-L, Cayol J-L, Patel BKC, Thomas P, Macarie H, Garcia J-L, Ollivier B (2002) Sporanaerobacter acetigenes gen. nov., sp. nov., a novel acetogenic, facultatively sulfur-reducing bacterium. Int J Syst Evol Microbiol 52:1217–1223. https://doi.org/10.1099/00207713-52-4-1217
Hernon F, Forbes C, Colleran E (2006) Identification of mesophilic and thermophilic fermentative species in anaerobic granular sludge. Water Sci Technol 54:19–24. https://doi.org/10.2166/wst.2006.481
Hickey RF, Wu WM, Veiga MC, Jones R (1991) Start-up, operation, monitoring and control of high-rate anaerobic treatment systems. Water Sci Technol 24:207–255. https://doi.org/10.2166/wst.1991.0226
Hill J (2009) Environmental costs and benefits of transportation biofuel production from food-and lignocellulose-based energy crops: a review. In: Lichtfouse E, Navarrete M, Debaeke P, Véronique S, Alberola C (eds) Sustainable agriculture. Springer, Dordrecht, pp 125–139. https://doi.org/10.1007/978-90-481-2666-8_10
Ho D, Jensen P, Batstone D (2014) Effects of temperature and hydraulic retention time on Acetotrophic pathways and performance in high-rate sludge digestion. Environ Sci Technol 48:6468–6476. https://doi.org/10.1021/es500074j
Hulshoff Pol LW, De Castro Lopes SI, Lettinga G, Lens PNL (2004) Anaerobic sludge granulation. Water Res 38:1376–1389. https://doi.org/10.1016/j.watres.2003.12.002
Imachi H, Sakai S, Ohashi A, Harada H, Hanada S, Kamagata Y, Sekiguchi Y (2007) Pelotomaculum propionicicum sp. nov., an anaerobic, mesophilic, obligately syntrophic, propionate-oxidizing bacterium. Int J Syst Evol Microbiol 57:1487–1492. https://doi.org/10.1099/ijs.0.64925-0
Issah AA, Kabera T, Kemausuor F (2020) Biogas optimisation processes and effluent quality: a review. Biomass Bioenergy 133:105449. https://doi.org/10.1016/j.biombioe.2019.105449
Ito T, Yoshiguchi K, Ariesyady HD, Okabe S (2011) Identification of a novel acetate-utilizing bacterium belonging to Synergistes group 4 in anaerobic digester sludge. ISME J 5:1844–1856. https://doi.org/10.1038/ismej.2011.59
Jain S (2019) Global potential of biogas. World Biogas Association, London
Jain A, Jain V (2019) Renewable energy sources for clean environment: opinion mining. Asian J Water Environ Pollut 16:9–14. https://doi.org/10.3233/AJW190013
Jia Y, Ng S-K, Lu H, Cai M, Lee PKH (2018) Genome-centric metatranscriptomes and ecological roles of the active microbial populations during cellulosic biomass anaerobic digestion. Biotechnol Biofuels 11:117. https://doi.org/10.1186/s13068-018-1121-0
Jiraprasertwong A, Maitriwong K, Chavadej S (2019) Production of biogas from cassava wastewater using a three-stage upflow anaerobic sludge blanket (UASB) reactor. Renew Energy 130:191–205. https://doi.org/10.1016/j.renene.2018.06.034
Kalyuzhnyi SV, Saucedo JV, Martinez JR (1997) The anaerobic treatment of soft drink wastewater in UASB and hybrid reactors. Appl Biochem Biotechnol 66:291–301. https://doi.org/10.1007/BF02785595
Kandylis P, Bekatorou A, Pissaridi K, Lappa K, Dima A, Kanellaki M, Koutinas AA (2016) Acidogenesis of cellulosic hydrolysates for new generation biofuels. Biomass Bioenergy 91:210–216. https://doi.org/10.1016/j.biombioe.2016.05.006
Kazda M, Langer S, Bengelsdorf FR (2014) Fungi open new possibilities for anaerobic fermentation of organic residues. Energy Sustain Soc 4:1–9. https://doi.org/10.1186/2192-0567-4-6
Ke S, Shi Z, Fang HHP (2005) Applications of two-phase anaerobic degradation in industrial wastewater treatment. Int J Environ Pollut 23:65. https://doi.org/10.1504/ijep.2005.006396
Khalid A, Arshad M, Anjum M, Mahmood T, Dawson L (2011) The anaerobic digestion of solid organic waste. Waste Manag. https://doi.org/10.1016/j.wasman.2011.03.021
Kim M, Ahn Y, Speece RE (2002) Comparative process stability and efficiency of anaerobic digestion; mesophilic vs. thermophilic. Water Res 36:4369–4385
Kirk-Davidoff D (2018) The greenhouse effect, aerosols, and climate change. In: Török B, Dransfield TBT-GC (eds) Green chemistry: an inclusive approach. Elsevier, Amsterdam, pp 211–234. https://doi.org/10.1016/B978-0-12-809270-5.00009-1
Klassen V, Blifernez-Klassen O, Wobbe L, Schlüter A, Kruse O, Mussgnug JH (2016) Efficiency and biotechnological aspects of biogas production from microalgal substrates. J Biotechnol 234:7–26. https://doi.org/10.1016/j.jbiotec.2016.07.015
Kobayashi T, Yasuda D, Li YY, Kubota K, Harada H, Yu HQ (2009) Characterization of start-up performance and archaeal community shifts during anaerobic self-degradation of waste-activated sludge. Bioresour Technol 100:4981–4988. https://doi.org/10.1016/j.biortech.2009.05.043
Koch C, Müller S, Harms H, Harnisch F (2014) Microbiomes in bioenergy production: from analysis to management. Curr Opin Biotechnol 27:65–72. https://doi.org/10.1016/j.copbio.2013.11.006
Koch K, Helmreich B, Drewes JE (2015) Co-digestion of food waste in municipal wastewater treatment plants: effect of different mixtures on methane yield and hydrolysis rate constant. Appl Energy 137:250–255. https://doi.org/10.1016/j.apenergy.2014.10.025
Kumar V, Kumar P, Kumar P, Singh J (2020) Anaerobic digestion of Azolla pinnata biomass grown in integrated industrial effluent for enhanced biogas production and COD reduction: optimization and kinetics studies. Environ Technol Innov 17:100627. https://doi.org/10.1016/j.eti.2020.100627
Kundu K, Sharma S, Sreekrishnan TR (2017) Influence of process parameters on anaerobic digestion microbiome in bioenergy production: towards an improved understanding. Bioenergy Res 10:288–303. https://doi.org/10.1007/s12155-016-9789-0
Kuruti K, Nakkasunchi S, Begum S, Juntupally S, Arelli V, Anupoju GR (2017) Rapid generation of volatile fatty acids (VFA) through anaerobic acidification of livestock organic waste at low hydraulic residence time (HRT). Bioresour Technol 238:188–193. https://doi.org/10.1016/j.biortech.2017.04.005
Lebuhn M, Hanreich A, Klocke M, Schlüter A, Bauer C, Pérez CM (2014) Towards molecular biomarkers for biogas production from lignocellulose-rich substrates. Anaerobe 29:10–21. https://doi.org/10.1016/j.anaerobe.2014.04.006
Lee J, Hwang B, Koo T, Shin SG, Kim W, Hwang S (2014) Temporal variation in methanogen communities of four different full-scale anaerobic digesters treating food waste-recycling wastewater. Bioresour Technol 168:59–63. https://doi.org/10.1016/j.biortech.2014.03.161
Lee S-H, Park J-H, Kim S-H, Yu BJ, Yoon J-J, Park H-D (2015) Evidence of syntrophic acetate oxidation by Spirochaetes during anaerobic methane production. Bioresour Technol 190:543–549. https://doi.org/10.1016/j.biortech.2015.02.066
Lee J, Shin SG, Han G, Koo T, Hwang S (2017) Bacteria and archaea communities in full-scale thermophilic and mesophilic anaerobic digesters treating food wastewater: key process parameters and microbial indicators of process instability. Bioresour Technol 245:689–697. https://doi.org/10.1016/j.biortech.2017.09.015
Leitão RC, van Haandel AC, Zeeman G, Lettinga G (2006) The effects of operational and environmental variations on anaerobic wastewater treatment systems: a review. Bioresour Technol 97:1105–1118. https://doi.org/10.1016/J.BIORTECH.2004.12.007
Lettinga G, Field J, Van Lier J, Zeeman G, Hulshoff Pol LW (1997) Advanced anaerobic wastewater treatment in the near future. Water Sci Technol 35:5–12. https://doi.org/10.1016/S0273-1223(97)00222-9
Leung DYC, Wang J (2016) An overview on biogas generation from anaerobic digestion of food waste. Int J Green Energy 13:119–131. https://doi.org/10.1080/15435075.2014.909355
Levén L, Eriksson ARB, Schnürer A (2007) Effect of process temperature on bacterial and archaeal communities in two methanogenic bioreactors treating organic household waste. FEMS Microbiol Ecol 59:683–693. https://doi.org/10.1111/j.1574-6941.2006.00263.x
Li Y, Park SY, Zhu J (2011) Solid-state anaerobic digestion for methane production from organic waste. Renew Sust Energ Rev 15:821–826. https://doi.org/10.1016/j.rser.2010.07.042
Li A, Chu Y, Wang X, Ren L, Yu J, Liu X, Yan J, Zhang L, Wu S, Li S (2013) A pyrosequencing-based metagenomic study of methane-producing microbial community in solid-state biogas reactor. Biotechnol Biofuels 6:1–17. https://doi.org/10.1186/1754-6834-6-3
Li J, Rui J, Yao M, Zhang S, Yan X, Wang Y, Yan Z, Li X (2015) Substrate type and free ammonia determine bacterial community structure in full-scale mesophilic anaerobic digesters treating cattle or swine manure. Front Microbiol 6:1337. https://doi.org/10.3389/fmicb.2015.01337
Li Y, Jin Y, Li J, Li H, Yu Z (2016) Effects of pungency degree on mesophilic anaerobic digestion of kitchen waste. Appl Energy 181:171–178. https://doi.org/10.1016/j.apenergy.2016.08.057
Li Y, Jin Y, Borrion A, Li H, Li J (2017) Effects of organic composition on mesophilic anaerobic digestion of food waste. Bioresour Technol 244:213–224. https://doi.org/10.1016/j.biortech.2017.07.006
Li Y, Chen Y, Wu J (2019) Enhancement of methane production in anaerobic digestion process: a review. Appl Energy 240:120–137. https://doi.org/10.1016/j.apenergy.2019.01.243
Lienen T, Kleyböcker A, Verstraete W, Würdemann H (2014) Foam formation in a downstream digester of a cascade running full-scale biogas plant: influence of fat, oil and grease addition and abundance of the filamentous bacterium Microthrix parvicella. Bioresour Technol 153:1–7. https://doi.org/10.1016/j.biortech.2013.11.017
Liu Y, Whitman WB (2008) Metabolic, phylogenetic, and ecological diversity of the methanogenic archaea. Ann N Y Acad Sci 1125:171–189. https://doi.org/10.1196/annals.1419.019
Liu Y, Xu HL, Show KY, Tay JH (2002) Anaerobic granulation technology for wastewater treatment. World J Microbiol Biotechnol 18:99–113. https://doi.org/10.1023/A:1014459006210
Liu T, Sun L, Müller B, Schnürer A (2017) Importance of inoculum source and initial community structure for biogas production from agricultural substrates. Bioresour Technol 245:768–777. https://doi.org/10.1016/j.biortech.2017.08.213
Liu C, Wachemo AC, Tong H, Shi S, Zhang L, Yuan H, Li X (2018) Biogas production and microbial community properties during anaerobic digestion of corn Stover at different temperatures. Bioresour Technol 261:93–103. https://doi.org/10.1016/j.biortech.2017.12.076
Lo YC, Saratale GD, Chen WM, Der Bai M, Chang JS (2009) Isolation of cellulose-hydrolytic bacteria and applications of the cellulolytic enzymes for cellulosic biohydrogen production. Enzym Microb Technol 44:417–425. https://doi.org/10.1016/j.enzmictec.2009.03.002
Łochyńska M, Frankowski J (2018) The biogas production potential from silkworm waste. Waste Manag 79:564–570. https://doi.org/10.1016/j.wasman.2018.08.019
Luo G, Angelidaki I (2013) Co-digestion of manure and whey for in situ biogas upgrading by the addition of H2: process performance and microbial insights. Appl Microbiol Biotechnol 97:1373–1381. https://doi.org/10.1007/s00253-012-4547-5
Luo G, Fotidis IA, Angelidaki I (2016) Comparative analysis of taxonomic, functional, and metabolic patterns of microbiomes from 14 full-scale biogas reactors by metagenomic sequencing and radioisotopic analysis. Biotechnol Biofuels 9:1–12. https://doi.org/10.1186/s13068-016-0465-6
Luostarinen S, Luste S, Sillanpää M (2009) Increased biogas production at wastewater treatment plants through co-digestion of sewage sludge with grease trap sludge from a meat processing plant. Bioresour Technol 100:79–85. https://doi.org/10.1016/j.biortech.2008.06.029
Lynd LR, Weimer PJ, Van Zyl WH, Isak S (2002) Microbial cellulose utilization: fundamentals and biotechnology. Microbiol Mol Biol Rev 66:506–577. https://doi.org/10.1128/MMBR.66.3.506
Ma J, Zhao B, Frear C, Zhao Q, Yu L, Li X, Chen S (2013) Methanosarcina domination in anaerobic sequencing batch reactor at short hydraulic retention time. Bioresour Technol 137:41–50. https://doi.org/10.1016/j.biortech.2013.03.101
Ma J, Zhao QB, Laurens LLM, Jarvis EE, Nagle NJ, Chen S, Frear CS (2015) Mechanism, kinetics and microbiology of inhibition caused by long-chain fatty acids in anaerobic digestion of algal biomass. Biotechnol Biofuels 8:1–12. https://doi.org/10.1186/s13068-015-0322-z
Maaz M, Yasin M, Aslam M, Kumar G, Atabani AE, Idrees M, Anjum F, Jamil F, Ahmad R, Khan AL, Lesage G, Heran M, Kim J (2019) Anaerobic membrane bioreactors for wastewater treatment: novel configurations, fouling control and energy considerations. Bioresour Technol 283:358–372. https://doi.org/10.1016/j.biortech.2019.03.061
Madsen M, Holm-Nielsen JB, Esbensen KH (2011) Monitoring of anaerobic digestion processes: a review perspective. Renew Sust Energ Rev 15:3141–3155. https://doi.org/10.1016/j.rser.2011.04.026
Mao C, Feng Y, Wang X, Ren G (2015) Review on research achievements of biogas from anaerobic digestion. Renew Sust Energ Rev 45:540–555. https://doi.org/10.1016/j.rser.2015.02.032
Martínez-Gutiérrez E (2018) Biogas production from different lignocellulosic biomass sources: advances and perspectives. 3 Biotech 8. https://doi.org/10.1007/s13205-018-1257-4
Martín-González L, Castro R, Pereira MA, Alves MM, Font X, Vicent T (2011) Thermophilic co-digestion of organic fraction of municipal solid wastes with FOG wastes from a sewage treatment plant: reactor performance and microbial community monitoring. Bioresour Technol 102:4734–4741. https://doi.org/10.1016/j.biortech.2011.01.060
Mata-Alvarez J, Macé S, Llabrés P (2000) Anaerobic digestion of organic solid wastes. An overview of research achievements and perspectives. Bioresour Technol 74:3–16. https://doi.org/10.1016/S0960-8524(00)00023-7
Mata-Alvarez J, Dosta J, Romero-Güiza MS, Fonoll X, Peces M, Astals S (2014) A critical review on anaerobic co-digestion achievements between 2010 and 2013. Renew Sust Energ Rev 36:412–427. https://doi.org/10.1016/j.rser.2014.04.039
Maus I, Rumming M, Bergmann I, Heeg K, Pohl M, Nettmann E, Jaenicke S, Blom J, Pühler A, Schlüter A, Sczyrba A, Klocke M (2018) Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors. Biotechnol Biofuels 11:167. https://doi.org/10.1186/s13068-018-1162-4
Mélo-Schlub AC, de Silva LAO, de Holanda SHB, Firmo ALB, Jucá JFT (2019) Resíduos sólidos urbanos: potencial fonte de carbono para degradação microbiana e produção de biogás. Brazil J Dev 5:11927–11942. https://doi.org/10.34117/bjdv5n8-052
Mendes, A.A., Oliveira, P.C., de Castro, H.F., 2012. Properties and biotechnological applications of porcine pancreatic lipase. J Mol Catal B Enzym 78, 119–134. https://doi.org/10.1016/j.molcatb.2012.03.004
Meng Y, Li S, Yuan H, Zou D, Liu Y, Zhu B, Chufo A, Jaffar M, Li X (2015) Evaluating biomethane production from anaerobic mono- and co-digestion of food waste and floatable oil (FO) skimmed from food waste. Bioresour Technol 185:7–13. https://doi.org/10.1016/j.biortech.2015.02.036
Metcalf L, Eddy HP (2004) Wastewater engineering: treatment, disposal and reuse, 4th ed, advances in water resources. McGraw-Hill, New York. https://doi.org/10.1016/0309-1708(80)90067-6
Milanez AY, Guimarães DD, da Maia GBS, de Souza JAP, Lemos MLF (2018) Biogás De Resíduos Agroindustriais: Panorama E Perspectivas, Departamento do Complexo Agroalimentar e de Biocombustíveis da Área de Indústria e Serviços do BNDES
Mosbæk F, Kjeldal H, Mulat DG, Albertsen M, Ward AJ, Feilberg A, Nielsen JL (2016) Identification of syntrophic acetate-oxidizing bacteria in anaerobic digesters by combined protein-based stable isotope probing and metagenomics. ISME J 10:2405–2418. https://doi.org/10.1038/ismej.2016.39
Mosey FE (1983) Mathematical modelling of the anaerobic digestion process: regulatory mechanisms for the formation of short-chain volatile acids from glucose. Water Sci Technol 15:209–232
Müller B, Sun L, Westerholm M, Schnürer A (2016) Bacterial community composition and fhs profiles of low- and high-ammonia biogas digesters reveal novel syntrophic acetate-oxidising bacteria. Biotechnol Biofuels 9:48. https://doi.org/10.1186/s13068-016-0454-9
Murthy PS, Madhava Naidu M (2012) Sustainable management of coffee industry by-products and value addition—a review. Resour Conserv Recycl 66:45–58. https://doi.org/10.1016/j.resconrec.2012.06.005
Nakasaki K, Kwon SH, Takemoto Y (2015) An interesting correlation between methane production rates and archaea cell density during anaerobic digestion with increasing organic loading. Biomass Bioenergy 78:17–24. https://doi.org/10.1016/j.biombioe.2015.04.004
Nakasaki K, Nguyen KK, Ballesteros FC, Maekawa T, Koyama M (2020) Characterizing the microbial community involved in anaerobic digestion of lipid-rich wastewater to produce methane gas. Anaerobe 61:102082. https://doi.org/10.1016/j.anaerobe.2019.102082
Nges IA, Liu J (2010) Effects of solid retention time on anaerobic digestion of dewatered-sewage sludge in mesophilic and thermophilic conditions. Renew Energy 35:2200–2206. https://doi.org/10.1016/j.renene.2010.02.022
Nielsen HB, Uellendahl H, Ahring BK (2007) Regulation and optimization of the biogas process: propionate as a key parameter. Biomass Bioenergy 31:820–830. https://doi.org/10.1016/j.biombioe.2007.04.004
Nobu MK, Narihiro T, Rinke C, Kamagata Y, Tringe SG, Woyke T, Liu W-T (2015) Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor. ISME J 9:1710–1722. https://doi.org/10.1038/ismej.2014.256
Nobu MK, Narihiro T, Kuroda K, Mei R, Liu WT (2016) Chasing the elusive Euryarchaeota class WSA2: genomes reveal a uniquely fastidious methyl-reducing methanogen. ISME J 10:2478–2487. https://doi.org/10.1038/ismej.2016.33
Olukanni DO, Olatunji TO (2018) Cassava waste management and biogas generation potential in selected local government areas in Ogun state, Nigeria. Recycling 3:58. https://doi.org/10.3390/recycling3040058
Pap B, Györkei Á, Boboescu IZ, Nagy IK, Bíró T, Kondorosi É, Maróti G (2015) Temperature-dependent transformation of biogas-producing microbial communities points to the increased importance of hydrogenotrophic methanogenesis under thermophilic operation. Bioresour Technol 177:375–380. https://doi.org/10.1016/j.biortech.2014.11.021
Pareek A, Dom R, Gupta J, Chandran J, Adepu V, Borse PH (2020) Insights into renewable hydrogen energy: recent advances and prospects. Mater Sci Energy Technol 3:319–327. https://doi.org/10.1016/j.mset.2019.12.002
Paritosh K, Kushwaha SK, Yadav M, Pareek N, Chawade A, Vivekanand V (2017) Food waste to energy: an overview of sustainable approaches for food waste management and nutrient recycling. Biomed Res Int 2017. https://doi.org/10.1155/2017/2370927
Parsaee M, Kiani Deh Kiani M, Karimi K (2019) A review of biogas production from sugarcane vinasse. Biomass Bioenergy 122:117–125. https://doi.org/10.1016/j.biombioe.2019.01.034
Patil SS, Kumar MS, Ball AS (2010) Microbial community dynamics in anaerobic bioreactors and algal tanks treating piggery wastewater. Appl Microbiol Biotechnol 87:353–363. https://doi.org/10.1007/s00253-010-2539-x
Pelletier E, Kreimeyer A, Bocs S, Rouy Z, Gyapay G, Chouari R, Rivière D, Ganesan A, Daegelen P, Sghir A, Cohen GN, Médigue C, Weissenbach J, Le Paslier D (2008) “Candidatus Cloacamonas acidaminovorans”: genome sequence reconstruction provides a first glimpse of a new bacterial division. J Bacteriol 190:2572–2579. https://doi.org/10.1128/JB.01248-07
Penteado MC, Schirmer WN, Dourado DC, Gueri MVD (2017) Análise do Potencial De Geração De Biogás a Partir Da Biodigestão Anaeróbia Da Vinhaça E Bagaço De Cana. BIOFIX Sci J 3:26. https://doi.org/10.5380/biofix.v3i1.56013
Pérez-Chávez AM, Mayer L, Albertó E (2019) Mushroom cultivation and biogas production: a sustainable reuse of organic resources. Energy Sustain Dev 50:50–60. https://doi.org/10.1016/j.esd.2019.03.002
Petropoulos E, Dolfing J, Yu Y, Wade MJ, Bowen EJ, Davenport RJ, Curtis TP (2018) Lipolysis of domestic wastewater in anaerobic reactors operating at low temperatures. Environ Sci Water Res Technol 4:1002–1013. https://doi.org/10.1039/C8EW00156A
Plugge CM, Balk M, Zoetendal EG, Stams AJM (2002) Gelria glutamica gen. Nov., sp. nov., a thermophilic, obligately syntrophic, glutamate-degrading anaerobe. Int J Syst Evol Microbiol 52:401–407. https://doi.org/10.1099/00207713-52-2-401
Puñal A, Trevisan M, Rozzi A, Lema JM (2000) Influence of C:N ratio on the start-up of up-flow anaerobic filter reactors. Water Res 34:2614–2619. https://doi.org/10.1016/S0043-1354(00)00161-5
Purkus A, Gawel E, Thrän D (2017) Addressing uncertainty in decarbonisation policy mixes – lessons learned from German and European bioenergy policy. Energy Res Soc Sci 33:82–94. https://doi.org/10.1016/j.erss.2017.09.020
Pycke BFG, Etchebehere C, Van De Caveye P, Negroni A, Verstraete W, Boon N (2011) A time-course analysis of four full-scale anaerobic digesters in relation to the dynamics of change of their microbial communities. Water Sci Technol 63:769–775. https://doi.org/10.2166/wst.2011.307
Ragsdale SW, Pierce E (2008) Acetogenesis and the Wood–Ljungdahl pathway of CO2 fixation. Biochim Biophys Acta Proteins Proteomics 1784:1873–1898. https://doi.org/10.1016/j.bbapap.2008.08.012
Rahman MA, Møller HB, Saha CK, Alam MM, Wahid R, Feng L (2017) Optimal ratio for anaerobic co-digestion of poultry droppings and lignocellulosic-rich substrates for enhanced biogas production. Energy Sustain Dev 39:59–66. https://doi.org/10.1016/j.esd.2017.04.004
Rajagopal D (2013) The fuel market effects of biofuel policies and implications for regulations based on lifecycle emissions. Environ Res Lett 8. https://doi.org/10.1088/1748-9326/8/2/024013
Rajagopal R, Massé DI, Singh G (2013) A critical review on inhibition of anaerobic digestion process by excess ammonia. Bioresour Technol 143:632–641. https://doi.org/10.1016/j.biortech.2013.06.030
Rajendran K, Mahapatra D, Venkatraman AV, Muthuswamy S, Pugazhendhi A (2020) Advancing anaerobic digestion through two-stage processes: current developments and future trends. Renew Sust Energ Rev 123:109746. https://doi.org/10.1016/j.rser.2020.109746
Ramsay IR, Pullammanappallil PC (2001) Protein degradation during anaerobic wastewater treatment: derivation of stoichiometry. Biodegradation 12:247–256. https://doi.org/10.1023/A:1013116728817
Regueiro L, Carballa M, Lema JM (2014) Outlining microbial community dynamics during temperature drop and subsequent recovery period in anaerobic co-digestion systems. J Biotechnol 192:179–186. https://doi.org/10.1016/j.jbiotec.2014.10.007
REN21 (2020) Renewables 2020. Global Status Report
Rincón B, Borja R, González JM, Portillo MC, Sáiz-Jiménez C (2008) Influence of organic loading rate and hydraulic retention time on the performance, stability and microbial communities of one-stage anaerobic digestion of two-phase olive mill solid residue. Biochem Eng J 40:253–261. https://doi.org/10.1016/j.bej.2007.12.019
Riya S, Suzuki K, Terada A, Hosomi M, Zhou S (2016) Influence of C/N ratio on performance and microbial community structure of dry-thermophilic anaerobic co-digestion of swine manure and rice straw. J Med Bioeng 5:11–14. https://doi.org/10.12720/jomb.5.1.11-14
Ros M, Franke-Whittle IH, Morales AB, Insam H, Ayuso M, Pascual JA (2013) Archaeal community dynamics and abiotic characteristics in a mesophilic anaerobic co-digestion process treating fruit and vegetable processing waste sludge with chopped fresh artichoke waste. Bioresour Technol 136:1–7. https://doi.org/10.1016/j.biortech.2013.02.058
Ruiz-Sánchez J, Campanaro S, Guivernau M, Fernández B, Prenafeta-Boldú FX (2018) Effect of ammonia on the active microbiome and metagenome from stable full-scale digesters. Bioresour Technol 250:513–522. https://doi.org/10.1016/j.biortech.2017.11.068
Sánchez ÓJ, Cardona CA (2008) Trends in biotechnological production of fuel ethanol from different feedstocks. Bioresour Technol 99:5270–5295. https://doi.org/10.1016/j.biortech.2007.11.013
Sangavai C, Bharathi M, Ganesh SP, Chellapandi P (2019) Kinetic modeling of Stickland reactions-coupled methanogenesis for a methanogenic culture. AMB Express 9. https://doi.org/10.1186/s13568-019-0803-8
Sanz JL, Rojas P, Morato A, Mendez L, Ballesteros M, González-Fernández C (2017) Microbial communities of biomethanization digesters fed with raw and heat pre-treated microalgae biomasses. Chemosphere 168:1013–1021. https://doi.org/10.1016/j.chemosphere.2016.10.109
Sarti A, Silva AJ, Zaiat M, Foresti E (2011) Full-scale anaerobic sequencing batch biofilm reactor for sulfate-rich wastewater treatment. Desalin Water Treat 25:13–19. https://doi.org/10.5004/dwt.2011.1864
Sasaki D, Hori T, Haruta S, Ueno Y, Ishii M, Igarashi Y (2011) Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste. J Biosci Bioeng 111:41–46. https://doi.org/10.1016/j.jbiosc.2010.08.011
Schattauer A, Abdoun E, Weiland P, Plöchl M, Heiermann M (2011) Abundance of trace elements in demonstration biogas plants. Biosyst Eng 108:57–65. https://doi.org/10.1016/j.biosystemseng.2010.10.010
Schink B (1997) Energetics of syntrophic cooperation in methanogenic degradation. Microbiol Mol Biol Rev 61:262–280
Schink B, Stams AJM (2013) Syntrophism among prokaryotes. In: Rosenberg E, DeLong EF, Lory S, Stackebrandt E, Thompson F (eds) The prokaryotes: prokaryotic communities and ecophysiology. Springer, Berlin Heidelberg, pp 471–493. https://doi.org/10.1007/978-3-642-30123-0_59
Schnürer A (2016) Biogas production: microbiology and technology. In: Hatti-Kaul R, Mamo G, Mattiasson B (eds) Anaerobes in biotechnology. Springer International Publishing, Cham, pp 195–234. https://doi.org/10.1007/10_2016_5
Seghezzo, L., Zeeman, G., Van Lier, J.B., Hamelers, H.V.M., Lettinga, G., 1998. A review: the anaerobic treatment of sewage in UASB and EGSB reactors. Bioresour Technol 65, 175–190. https://doi.org/10.1016/S0960-8524(98)00046-7
Seon J, Lee T, Lee SC, Pham HD, Woo HC, Song M (2014) Bacterial community structure in maximum volatile fatty acids production from alginate in acidogenesis. Bioresour Technol 157:22–27. https://doi.org/10.1016/j.biortech.2014.01.072
Sharma SK, Mishra IM, Sharma MP, Saini JS (1988) Effect of particle size on biogas generation from biomass residues. Biomass 17:251–263. https://doi.org/10.1016/0144-4565(88)90107-2
Shi X, Zuo J, Li B, Yu H (2020) Two-stage anaerobic digestion of food waste coupled with in situ ammonia recovery using gas membrane absorption: performance and microbial community. Bioresour Technol 297:122458. https://doi.org/10.1016/j.biortech.2019.122458
Show KY, Yan Y, Yao H, Guo H, Li T, Show DY, Chang JS, Lee DJ (2020) Anaerobic granulation: a review of granulation hypotheses, bioreactor designs and emerging green applications. Bioresour Technol 300:122751. https://doi.org/10.1016/j.biortech.2020.122751
Shrestha S, Fonoll X, Khanal SK, Raskin L (2017) Biological strategies for enhanced hydrolysis of lignocellulosic biomass during anaerobic digestion: current status and future perspectives. Bioresour Technol 245:1245–1257. https://doi.org/10.1016/j.biortech.2017.08.089
Smith AL, Stadler LB, Love NG, Skerlos SJ, Raskin L (2012) Perspectives on anaerobic membrane bioreactor treatment of domestic wastewater: a critical review. Bioresour Technol 122:149–159. https://doi.org/10.1016/j.biortech.2012.04.055
Solli L, Håvelsrud OE, Horn SJ, Rike AG (2014) A metagenomic study of the microbial communities in four parallel biogas reactors. Biotechnol Biofuels 7:1–15. https://doi.org/10.1186/s13068-014-0146-2
Sosnowski P, Wieczorek A, Ledakowicz S (2003) Anaerobic co-digestion of sewage sludge and organic fraction of municipal solid wastes. Adv Environ Res 7:609–616. https://doi.org/10.1016/S1093-0191(02)00049-7
Sousa DZ, Pereira MA, Stams AJM, Alves MM, Smidt H (2007a) Microbial communities involved in anaerobic degradation of unsaturated or saturated long-chain fatty acids. Appl Environ Microbiol 73:1054 LP–1064. https://doi.org/10.1128/AEM.01723-06
Sousa DZ, Smidt H, Alves MM, Stams AJM (2007b) Syntrophomonas zehnderi sp. nov., an anaerobe that degrades long-chain fatty acids in co-culture with Methanobacterium formicicum. Int J Syst Evol Microbiol 57:609–615. https://doi.org/10.1099/ijs.0.64734-0
Sousa DZ, Smidt H, Alves MM, Stams AJM (2009) Ecophysiology of syntrophic communities that degrade saturated and unsaturated long-chain fatty acids. FEMS Microbiol Ecol 68:257–272. https://doi.org/10.1111/j.1574-6941.2009.00680.x
Souza DA, Chinalia FA, Foresti E, Zaiat M (2009) Bioremediation of gasoline-contaminated groundwater in a pilot-scale packed-bed anaerobic reactor. Int Biodeterior Biodegrad 63:747–751. https://doi.org/10.1016/j.ibiod.2009.05.007
Speece RE (1983) Anaerobic biotechnology for industrial wastewater treatment, 1st ed, environmental science and technology. Archae Press, Nashiville. https://doi.org/10.1021/es00115a001
Steinberg LM, Regan JM (2011) Response of lab-scale methanogenic reactors inoculated from different sources to organic loading rate shocks. Bioresour Technol 102:8790–8798. https://doi.org/10.1016/j.biortech.2011.07.017
Stergiou P-Y, Foukis A, Filippou M, Koukouritaki M, Parapouli M, Theodorou LG, Hatziloukas E, Afendra A, Pandey A, Papamichael EM (2013) Advances in lipase-catalyzed esterification reactions. Biotechnol Adv 31:1846–1859. https://doi.org/10.1016/j.biotechadv.2013.08.006
Stolze Y, Bremges A, Rumming M, Henke C, Maus I, Pühler A, Sczyrba A, Schlüter A (2016) Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnol Biofuels 9:156. https://doi.org/10.1186/s13068-016-0565-3
Stolze Y, Bremges A, Maus I, Pühler A, Sczyrba A, Schlüter A (2018) Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants. Microb Biotechnol 11:667–679. https://doi.org/10.1111/1751-7915.12982
St-Pierre B, Wright ADG (2014) Comparative metagenomic analysis of bacterial populations in three full-scale mesophilic anaerobic manure digesters. Appl Microbiol Biotechnol 98:2709–2717. https://doi.org/10.1007/s00253-013-5220-3
Sun Y, Wang D, Yan J, Qiao W, Wang W, Zhu T (2014) Effects of lipid concentration on anaerobic co-digestion of municipal biomass wastes. Waste Manag 34:1025–1034. https://doi.org/10.1016/j.wasman.2013.07.018
Sun L, Liu T, Müller B, Schnürer A (2016) The microbial community structure in industrial biogas plants influences the degradation rate of straw and cellulose in batch tests. Biotechnol Biofuels 9:128. https://doi.org/10.1186/s13068-016-0543-9
Surendra KC, Takara D, Hashimoto AG, Khanal SK (2014) Biogas as a sustainable energy source for developing countries: opportunities and challenges. Renew Sust Energ Rev 31:846–859. https://doi.org/10.1016/j.rser.2013.12.015
Tabatabaei M, Aghbashlo M, Valijanian E, Kazemi Shariat Panahi H, Nizami A-S, Ghanavati H, Sulaiman A, Mirmohamadsadeghi S, Karimi K (2020) A comprehensive review on recent biological innovations to improve biogas production, part 1: upstream strategies. Renew Energy 146:1204–1220. https://doi.org/10.1016/j.renene.2019.07.037
Tang Y, Shigematsu T, Morimura S, Kida K (2005) Microbial community analysis of mesophilic anaerobic protein degradation process using bovine serum albumin (BSA)-fed continuous cultivation. J Biosci Bioeng 99:150–164. https://doi.org/10.1263/jbb.99.150
Tartakovsky B, Guiot SR (1997) Modeling and analysis of layered stationary anaerobic granular biofilms. Biotechnol Bioeng 54:122–130. https://doi.org/10.1002/(SICI)1097-0290
Tikariha A, Sahu O (2014) Study of characteristics and treatments of dairy industry waste water. J Appl Environ Microbiol 2, 16:–22. https://doi.org/10.12691/JAEM-2-1-4
Tomazetto G, Hahnke S, Maus I, Wibberg D, Pühler A, Schlüter A, Klocke M (2014) Complete genome sequence of Peptoniphilus sp. strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation. J Biotechnol 192:59–61. https://doi.org/10.1016/j.jbiotec.2014.09.011
Tyagi VK, Fdez-Güelfo LA, Zhou Y, Álvarez-Gallego CJ, Garcia LIR, Ng WJ (2018) Anaerobic co-digestion of organic fraction of municipal solid waste (OFMSW): progress and challenges. Renew Sust Energ Rev 93:380–399. https://doi.org/10.1016/j.rser.2018.05.051
Ueki A, Abe K, Suzuki D, Kaku N, Watanabe K, Ueki K (2009) Anaerosphaera aminiphila gen. Nov., sp. nov., a glutamate-degrading, Gram-positive anaerobic coccus isolated from a methanogenic reactor treating cattle waste. Int J Syst Evol Microbiol 59:3161–3167. https://doi.org/10.1099/ijs.0.011858-0
Van Lier JB (2008) High-rate anaerobic wastewater treatment: Diversifying from end-of-the-pipe treatment to resource-oriented conversion techniques. Water Sci. Technol 57:1137–1148. https://doi.org/10.2166/wst.2008.040
Van Lier JB, Tilche A, Ahring BK, Macarie H, Moletta R, Dohanyos M, Hulshoff Pol LW, Lens P, Verstraete W (2001) New perspectives in anaerobic digestion. Water Sci Technol 43:1–18. https://doi.org/10.2166/wst.2001.0001
VanBriesen JM (2001) Thermodynamic yield predictions for biodegradation through oxygenase activation reactions. Biodegradation 12:477–480. https://doi.org/10.1023/A:1015015325764
Vanwonterghem I, Jensen PD, Ho DP, Batstone DJ, Tyson GW (2014) Linking microbial community structure, interactions and function in anaerobic digesters using new molecular techniques. Curr Opin Biotechnol 27:55–64. https://doi.org/10.1016/j.copbio.2013.11.004
Vanwonterghem I, Jensen PD, Rabaey K, Tyson GW (2015) Temperature and solids retention time control microbial population dynamics and volatile fatty acid production in replicated anaerobic digesters. Sci Rep 5:1–8. https://doi.org/10.1038/srep08496
Vasco-Correa J, Khanal S, Manandhar A, Shah A (2018) Anaerobic digestion for bioenergy production: global status, environmental and techno-economic implications, and government policies. Bioresour Technol 247:1015–1026. https://doi.org/10.1016/j.biortech.2017.09.004
Vassalle L, Díez-Montero R, Machado ATR, Moreira C, Ferrer I, Mota CR, Passos F (2020) Upflow anaerobic sludge blanket in microalgae-based sewage treatment: co-digestion for improving biogas production. Bioresour Technol 300:122677. https://doi.org/10.1016/j.biortech.2019.122677
Vinardell S, Astals S, Peces M, Cardete MA, Fernández I, Mata-Alvarez J, Dosta J (2020) Advances in anaerobic membrane bioreactor technology for municipal wastewater treatment: a 2020 updated review. Renew Sust Energ Rev 130:109392. https://doi.org/10.1016/j.rser.2020.109936
Wagner AO, Lackner N, Mutschlechner M, Prem EM, Markt R, Illmer P (2018) Biological pretreatment strategies for second-generation lignocellulosic resources to enhance biogas production. Energies 11. https://doi.org/10.3390/en11071797
Wang K, Yin J, Shen D, Li N (2014) Anaerobic digestion of food waste for volatile fatty acids (VFAs) production with different types of inoculum: effect of pH. Bioresour Technol 161:395–401. https://doi.org/10.1016/j.biortech.2014.03.088
Wang P, Wang H, Qiu Y, Ren L, Jiang B (2018) Microbial characteristics in anaerobic digestion process of food waste for methane production–a review. Bioresour Technol 248:29–36. https://doi.org/10.1016/j.biortech.2017.06.152
Wei L, An X, Wang S, Xue C, Jiang J, Zhao Q, Kabutey FT, Wang K (2017) Effect of hydraulic retention time on deterioration/restarting of sludge anaerobic digestion: extracellular polymeric substances and microbial response. Bioresour Technol 244:261–269. https://doi.org/10.1016/j.biortech.2017.07.110
Weiland P (2010) Biogas production: current state and perspectives. Appl Microbiol Biotechnol 85:849–860. https://doi.org/10.1007/s00253-009-2246-7
Weiland P, Rozzi A (1991) The start-up, operation and monitoring of high-rate anaerobic treatment systems: Discusser’s report. Water Sci Technol 24:257–277
Welander PV, Metcalf WW (2005) Loss of the mtr operon in Methanosarcina blocks growth on methanol, but not methanogenesis, and reveals an unknown methanogenic pathway. Proc Natl Acad Sci U S A 102:10664–10669. https://doi.org/10.1073/pnas.0502623102
Weng C, Jeris JS (1976) Biochemical mechanisms in the methane fermentation of glutamic and oleic acids. Water Res 10:9–18. https://doi.org/10.1016/0043-1354(76)90151-2
Werner JJ, Garcia ML, Perkins SD, Yarasheski KE, Smith SR, Muegge BD, Stadermann FJ, DeRito CM, Floss C, Madsen EL, Gordon JI, Angenent LT (2014) Microbial community dynamics and stability during an ammonia-induced shift to syntrophic acetate oxidation. Appl Environ Microbiol 80:3375 LP–3383. https://doi.org/10.1128/AEM.00166-14
Westerholm M, Moestedt J, Schnürer A (2016) Biogas production through syntrophic acetate oxidation and deliberate operating strategies for improved digester performance. Appl Energy 179:124–135. https://doi.org/10.1016/j.apenergy.2016.06.061
Westerholm M, Müller B, Singh A, Karlsson Lindsjö O, Schnürer A (2018) Detection of novel syntrophic acetate-oxidizing bacteria from biogas processes by continuous acetate enrichment approaches. Microb Biotechnol 11:680–693. https://doi.org/10.1111/1751-7915.13035
Wilson CA, Murthy SM, Fang Y, Novak JT (2008) The effect of temperature on the performance and stability of thermophilic anaerobic digestion. Water Sci Technol 57:297–304. https://doi.org/10.2166/wst.2008.027
World Biogas Association (2019) Global potential of biogas. World Biogas Association, London
Worm P, Koehorst JJ, Visser M, Sedano-Núñez VT, Schaap PJ, Plugge CM, Sousa DZ, Stams AJM (2014) A genomic view on syntrophic versus non-syntrophic lifestyle in anaerobic fatty acid degrading communities. Biochim Biophys Acta Bioenerg 1837:2004–2016. https://doi.org/10.1016/j.bbabio.2014.06.005
Wu ZL, Lin Z, Sun ZY, Gou M, Xia ZY, Tang YQ (2020) A comparative study of mesophilic and thermophilic anaerobic digestion of municipal sludge with high-solids content: reactor performance and microbial community. Bioresour Technol 302:122851. https://doi.org/10.1016/j.biortech.2020.122851
Xu F, Li Y, Ge X, Yang L, Li Y (2018a) Anaerobic digestion of food waste – challenges and opportunities. Bioresour Technol 247:1047–1058. https://doi.org/10.1016/j.biortech.2017.09.020
Xu R, Yang ZH, Zheng Y, Liu JB, Xiong WP, Zhang YR, Lu Y, Xue WJ, Fan CZ (2018b) Organic loading rate and hydraulic retention time shape distinct ecological networks of anaerobic digestion related microbiome. Bioresour Technol 262:184–193. https://doi.org/10.1016/j.biortech.2018.04.083
Xu R, Zhang K, Liu P, Khan A, Xiong J, Tian F, Li X (2018c) A critical review on the interaction of substrate nutrient balance and microbial community structure and function in anaerobic co-digestion. Bioresour Technol 247:1119–1127. https://doi.org/10.1016/j.biortech.2017.09.095
Yadvika S, Sreekrishnan TR, Kohli S, Rana V (2004) Enhancement of biogas production from solid substrates using different techniques – a review. Bioresour Technol 95:1–10. https://doi.org/10.1016/j.biortech.2004.02.010
Yamada T, Sekiguchi Y, Hanada S, Imachi H, Ohashi A, Harada H, Kamagata Y (2006) Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. and Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and description of the new classes Anaerolineae classis nov. and Caldilineae classis nov. in the bacterial phylum Chloroflexi. Int J Syst Evol Microbiol 56:1331–1340. https://doi.org/10.1099/ijs.0.64169-0
Yin J, Wang K, Yang Y, Shen D, Wang M, Mo H (2014) Improving production of volatile fatty acids from food waste fermentation by hydrothermal pretreatment. Bioresour Technol 171:323–329. https://doi.org/10.1016/j.biortech.2014.08.062
Yu D, Kurola JM, Lähde K, Kymäläinen M, Sinkkonen A, Romantschuk M (2014) Biogas production and methanogenic archaeal community in mesophilic and thermophilic anaerobic co-digestion processes. J Environ Manag 143:54. https://doi.org/10.1016/j.jenvman.2014.04.025
Yuan H, Zhu N (2016) Progress in inhibition mechanisms and process control of intermediates and by-products in sewage sludge anaerobic digestion. Renew Sust Energ Rev 58:429–438. https://doi.org/10.1016/j.rser.2015.12.261
Zabed HM, Akter S, Yun J, Zhang G, Zhang Y, Qi X (2020) Biogas from microalgae: technologies, challenges and opportunities. Renew Sust Energ Rev 117:109503. https://doi.org/10.1016/j.rser.2019.109503
Zábranská J, Štěpová J, Wachtl R, Jenlček P, Dohányos M (2000) The activity of anaerobic biomass in thermophilic and mesophilic digesters at different loading rates. In: Water science and technology, pp 49–56. https://doi.org/10.2166/wst.2000.0168
Zakrzewski M, Goesmann A, Jaenicke S, Jünemann S, Eikmeyer F, Szczepanowski R, Al-Soud WA, Sørensen S, Pühler A, Schlüter A (2012) Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing. J Biotechnol 158:248–258. https://doi.org/10.1016/j.jbiotec.2012.01.020
Zhang TC, Noike T (1994) Influence of retention time on reactor performance and bacterial trophic populations in anaerobic digestion processes. Water Res 28:27–36. https://doi.org/10.1016/0043-1354(94)90116-3
Zhang C, Xiao G, Peng L, Su H, Tan T (2013) The anaerobic co-digestion of food waste and cattle manure. Bioresour Technol 129:170–176. https://doi.org/10.1016/j.biortech.2012.10.138
Zhang C, Su H, Baeyens J, Tan T (2014) Reviewing the anaerobic digestion of food waste for biogas production. Renew Sust Energ Rev 38:383–392. https://doi.org/10.1016/j.rser.2014.05.038
Zhen G, Pan Y, Lu X, Li YY, Zhang Z, Niu C, Kumar G, Kobayashi T, Zhao Y, Xu K (2019) Anaerobic membrane bioreactor towards biowaste biorefinery and chemical energy harvest: recent progress, membrane fouling and future perspectives. Renew Sust Energ Rev 115:109392. https://doi.org/10.1016/j.rser.2019.109392
Ziels RM, Sousa DZ, Stensel HD, Beck DAC (2018) DNA-SIP based genome-centric metagenomics identifies key long-chain fatty acid-degrading populations in anaerobic digesters with different feeding frequencies. ISME J 12:112–123. https://doi.org/10.1038/ismej.2017.143
Ziganshin AM, Liebetrau J, Pröter J, Kleinsteuber S (2013) Microbial community structure and dynamics during anaerobic digestion of various agricultural waste materials. Appl Microbiol Biotechnol 97:5161–5174. https://doi.org/10.1007/s00253-013-4867-0
Acknowledgments
We acknowledge the support from the doctoral fellowship from Brenda C. G. Rodrigues, Bruna S. de Mello and Luana C. Grangeiro by CAPES.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2021 The Author(s), under exclusive license to Springer Nature Singapore Pte Ltd.
About this chapter
Cite this chapter
Rodrigues, B.C.G., de Mello, B.S., Grangeiro, L.C., Sarti, A., Dussán, K.J. (2021). Microbial Degradation in the Biogas Production of Value-Added Compounds. In: Inamuddin, .., Ahamed, M.I., Prasad, R. (eds) Recent Advances in Microbial Degradation. Environmental and Microbial Biotechnology. Springer, Singapore. https://doi.org/10.1007/978-981-16-0518-5_3
Download citation
DOI: https://doi.org/10.1007/978-981-16-0518-5_3
Published:
Publisher Name: Springer, Singapore
Print ISBN: 978-981-16-0517-8
Online ISBN: 978-981-16-0518-5
eBook Packages: Earth and Environmental ScienceEarth and Environmental Science (R0)