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Species richness, endemism and species composition in the tropical Afroalpine flora

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Abstract

Plant species richness and endemism on oceanic islands is dependent on island age, size, elevation and distance to nearest source of migrants. Mainland ‘island’ systems, such as the cool-adapted tropical-alpine flora of the mountains in Africa, are less well studied. Here we analyse the tropical Afroalpine flora, found on highly isolated mountains straddling the equator. Using the β-sim index in a hierarchical clustering approach combined with ordination methods and mantel tests, we locate four geographical groups: West Africa, northern East Africa, western East Africa and eastern East Africa. We show that these groupings are better explained as the consequence of geographical isolation rather than environmental filtering. We further show that the species richness of the tropical Afroalpine mountain regions—similar to oceanic islands—can be explained by a model including age, area size, elevation and isolation. Levels of endemism are best explained by species richness in combination with area and isolation. Overall we develop a comprehensive model of the species richness, endemism and composition of the tropical Afroalpine flora.

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References

  • African Plants Database (version 334) (2011) Conservatoire et Jardin botaniques de la Ville de Genève and South African National Biodiversity Institute Pretoria “Retrieved January–September 2011“ from http://www.ville–gech/musinfo/bd/cjb/africa/

  • Agnew ADQ, Agnew S (1994) Upland Kenya wild flowers: a flora of the ferns and herbaceous flowering plants of Upland Kenya. 2nd. Oxford University Press, London

    Google Scholar 

  • Arrhenius O (1921) Species and area. J Ecol 9:95–99

    Article  Google Scholar 

  • Assefa A, Ehrich D, Taberlet P, Nemomissa S, Brochmann C (2007) Pleistocene colonization of afro-alpine ‘sky islands’ by the arctic-alpine Arabis alpina. Heredity 99:33–142

    Article  Google Scholar 

  • Ayele TB, Gailing O, Umer M, Finkeldey R (2009) Chloroplast DNA haplotype diversity and postglacial recolonization of Hagenia abyssinica (Bruce) J.F Gmel. in Ethiopia. Plant Syst Evol 280:175–185

    Article  CAS  Google Scholar 

  • Barlow BA (1994) Phytogeography of the Australian region. In: Groves RH (ed) Australian vegetation, 2nd edn. Cambridge University Press, pp 3–36

  • Bauer FU, Glasmacher UA, Malikwisha M, Mambo VS, Mutete BV (2010) The Eastern Congo—a beauty spot rediscovered from a geological point of view. Geol Today 26:55–64

    Article  Google Scholar 

  • Becking RW (1968) Vegetational response to change in environment and change in species tolerance with time. Plant Ecol 16:135–158

    Article  Google Scholar 

  • Bonnefille R (2010) Cenozoic vegetation climate changes and hominid evolution in tropical Africa. Glob Planet Change 72:390–411

    Article  Google Scholar 

  • Brock G, Datta S, Pihur V, Datta S (2008) clValid: an R package for cluster validation. J Stat Softw 25:1–22. http://www.jstatsoftorg/v25/i04

  • Bussmann RW (2006) Vegetation zonation and nomenclature of African Mountains—an overview. Lyonia 11:41–66

    Google Scholar 

  • Buytaert W, Tobon C, Cuesta-Camacho C (2011) Potential impacts of climate change on the environmental services of humid tropical alpine regions. Glob Ecol Biogeogr 20:19–33

    Article  Google Scholar 

  • Cable S, Cheek M (1998) The plants of Mount Cameroon: a conservation checklist. Kew Publishing, Royal Botanical Gardens Kew

    Google Scholar 

  • Carbutt C, Edwards TJ (2004) The flora of the Drakensberg Alpine Centre. Edinb J Bot 60:581–607

    Google Scholar 

  • Cavender-Bares J, Gonzalez-Rodriguez A, Pahlich A, Koehler K, Deacon N (2011) Phylogeography and climatic niche evolution in live oaks (Quercus series Virentes) from the tropics to the temperate zone. J Biogeogr 38:962–981

    Article  Google Scholar 

  • Chorowicz J (2005) The East African rift system. J Afr Earth Sci 43:379–410

    Article  Google Scholar 

  • Coe MJ (1967) The ecology of the alpine zone of Mount Kenya. Monogr Biol 17. Dr W Junk, The Hague

  • Coetzee JA (1964) Evidence for considerable depression of vegetation belts during Upper Pleistocene on East African Mountains. Nature 204:564–566

    Article  Google Scholar 

  • Coetzee JA (1967) Pollen analytical studies in East and Southern Africa. Palaeoecol Afr 3:1–146

    Google Scholar 

  • Davies TD, Vincent CE, Beresford AKC (1985) July August rainfall in west-central Kenya. J Climatol 5:17–33

    Article  Google Scholar 

  • de Menocal PB (2011) Climate and human evolution. Science 331:540–542

    Article  Google Scholar 

  • Deil U, Gifri AN et al (1998) Monaten and Wadi vegetation. In: Ghazanfar SA, Fisher M (eds) Vegetation of the Arabian Peninsula. Geobotany 25. Kluwer Academic Publishers, Dordrecht, pp 123–174

    Google Scholar 

  • Desamore A, Laenen B, Devos N, Popp M, Gonzalez-Mancebo JM, Carine MA, Vanderpoorten A (2011) Out of Africa: north-westwards Pleistocene expansions of the heather Erica arborea. J Biogeogr 38:164–176

    Article  Google Scholar 

  • Donges JF, Donner RV, Trauth MH, Marwan N, Schellhuber H-J, Kurths J (2011) Nonlinear detection of paleoclimate-variability transitions possibly related to human evolution. PNAS 108:20422–20427

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Duarte MC, Rego F, Romeiras MM, Moreira I (2008) Plant species richness in the Cape Verde islands—eco-geographical determinants. Biodiv Conserv 17:453–466

    Article  Google Scholar 

  • Efron B, Tibshirani R (1997) Improvements on cross-validation The 632 + bootstrap method. J Am Stat Assoc 92:548–560

    Google Scholar 

  • Ehrich D, Assefa A, Taberlet P, Nemomissa S, Brochmann C (2007) Pleistocene colonization of afro-alpine ‘sky islands’ by the arctic-alpine Arabis alpina. Heredity 99:133–142

    Article  PubMed  Google Scholar 

  • Eldredge LG, Miller SE (1994) Records of the Hawaii biological survey for 1994. Bishop Mus Occas Pap 41:3–18

    Google Scholar 

  • Emerson BC, Kolm N (2005) Species diversity can drive speciation. Nature 434:1015–1017

    Article  PubMed  CAS  Google Scholar 

  • Engler A (1892) Über die Hochgebirgsflora des tropischen Afrika. Königliche Akademie der Wissenschaften zu Berlin, Berlin

    Google Scholar 

  • Fjeldsa J, Lovett JC (1997) Geographical patterns of old and young species in African forest biota. The significance of specific montane areas as evolutionary centres. Biodiv Conserv 6:325–346

    Article  Google Scholar 

  • Flora of Ethiopia and Eritrea (1980-2013 Volumes 2–8). The Swedish Science Press, Uppsala

  • Flora of Tropical East Africa (1952–2011) Fasicle (1–225). Royal Botanic Gardens, Kew

  • Francisco-Ortega J, Santos-Guerra A, Kim S-C, Crawford DJ (2000) Plant genetic diversity in the Canary Islands: a conservation perspective. Am J Bot 87:909–919

    Article  PubMed  CAS  Google Scholar 

  • Friis I, Vollesen K (1998) Flora of the Sudan-Uganda border area east of the Nile part (1) catalogue of vascular plants. Kongel Danske Vidensk Selsk, Copenhagen

    Google Scholar 

  • Gehrke B, Linder HP (2009) The scramble for Africa Pan-temperate elements on the African high mountains. Proc R Soc B 276:2657–2665

    Article  PubMed  PubMed Central  Google Scholar 

  • Gehrke B, Linder HP (2011) Time space and ecology why some lineages have more species than others. J Biogeogr 38:1948–1962

    Article  Google Scholar 

  • Givnish TJ, Vazquez JA (1998) Altitudinal gradients in tropical forest composition structure and diversity in the Sierra de Manantlan. J Ecol 86:999–1020

    Article  Google Scholar 

  • Gizawa A, Kebede M, Nemomissa S, Ehrich D, Bekelea B, Mirré V, Popp M, Brochmann C (2013) Phylogeography of the heathers Erica arborea and E. trimera in the afro-alpine ‘sky islands’ inferred from AFLPs and plastid DNA sequences. Flora 208:453–463

    Article  Google Scholar 

  • Grimshaw JM (2001) What do we really know about the Afromontane archipelago? Syst Geogr Pl 71:949–957

    Article  Google Scholar 

  • Grove AT (1983) Evolution of the physical geography of the East African Rift Valley region. In: Sims RW, Price JH, Whalley PES (eds) Evolution time and space: the emergence of the biosphere. Academic Press, London, pp 115–155

    Google Scholar 

  • Hamilton AC (1982) Environmental history of East Africa. Academic Press, London

    Google Scholar 

  • Hamilton AC, Taylor D (1991) History of climate and forests in tropical Africa during the last 8 Million years. Clim Change 19:65–78

    Article  Google Scholar 

  • Hansen K, Johansen J (1982) Flora and the vegetation of the Faroe Islands. In: Rutherford GK (ed) The physical environment of the Faroe Islands, Monographie Biologicae 46. Junk, The Hauge, pp 35–52

  • Harmsen R, Spence JR, Mahaney WC (1991) Glacial interglacial cycles and development of the Afroalpine ecosystem on East-African mountains 2) Origins and development of the biotic component. J Afr Earth Sci 12:513–523

    Article  Google Scholar 

  • Hauman L (1933) Esquisse de la végétation des hautes altitudes sur le Ruwenzori. Bull Acad R Sci Belgique 19:900–917

    Google Scholar 

  • Hedberg O (1951) Vegetation belts of the East African mountains. Svensk Bot Tidskr 45:140–202

    Google Scholar 

  • Hedberg O (1957) Afroalpine vascular plants. Symbolae Botanicae Upsalienses XV, Uppsala

    Google Scholar 

  • Hedberg O (1961) The phytogeographical position of the Afroalpine flora. Rec Adv Bot 1:914–919

    Google Scholar 

  • Hedberg O (1964) Features of Afroalpine plant ecology. Almqvist and Wiksells, Uppsala

    Google Scholar 

  • Hedberg O (1969) Evolution and speciation in a tropical high mountain flora. Biol J Linn Soc 1:135–148

    Article  Google Scholar 

  • Hedberg O (1994) Afroalpine centres of biodiversity and endemism. In: Seyani JH, Chikuni AC (eds) Proceedings of the XIIIth plenar meeting AETFAT, vol 2. National Herbarium and Botanic Gardens of Malawi, Zomba, pp 877–882

    Google Scholar 

  • Hemp A (2005) Climate change-driven forest fires marginalize the impact of ice cap wasting on Kilimanjaro. Glob Chang Biol 11:1013–1023

    Article  Google Scholar 

  • Hemp A (2006a) Continuum or zonation? Altitudinal gradients in the forest vegetation of Mt Kilimanjaro. Plant Ecol 184:27–42

    Article  Google Scholar 

  • Hemp A (2006b) Vegetation of Kilimanjaro Hidden endemics and missing bamboo. Afr J Ecol 44:305–328

    Article  Google Scholar 

  • Kebede M, Ehrich D, Taberlet P, Nemomissa S, Brochmann C (2007) Phylogeography and conservation genetics of a giant lobelia (Lobelia giberroa) in Ethiopian and tropical east African mountains. Mol Ecol 16:1233–1243

    Article  PubMed  CAS  Google Scholar 

  • Killick DJB (1978) The Afro-Alpine region. In: Werger MJA (ed) Biogeography and ecology of southern Africa. Dr W Junk, The Hague, pp 515–542

    Chapter  Google Scholar 

  • Koch MA, Kiefer C, Ehrich D, Vogel J, Brochmann C, Mummenhoff K (2006) Three times out of Asia minor The phylogeography of Arabis alpina L. (Brassicaceae). Mol Ecol 15:825–839

    Article  PubMed  CAS  Google Scholar 

  • Koleff P, Gaston KJ, Lennon JJ (2003) Measuring beta diversity for presence–absence data. J Anim Ecol 72:367–382

    Article  Google Scholar 

  • Körner C (2003) Alpine plant life, 2nd edn. Springer, Berlin

    Book  Google Scholar 

  • Körner C, Paulsen J (2004) A world-wide study of high altitude treeline temperatures. J Biogeogr 31:713–732

    Article  Google Scholar 

  • Körner C, Paulsen J, Spehn EM (2011) A definition of mountains and their bioclimatic belts for global comparisons of biodiversity data. Alp Bot 121:73–78

    Article  Google Scholar 

  • Kreft H, Jetz W, Mutke J, Kier G, Barthlott W (2008) Global diversity of island floras from a macroecological perspective. Ecol Lett 11:116–127

    PubMed  Google Scholar 

  • La Sorte FA, Pysek P (2009) Extra-regional residence time as a correlate of plant invasiveness European archaeophytes in North America. Ecol 90:2589–2597

    Article  Google Scholar 

  • Lauer W (1975) Vom Wesen der Tropen. Akademie der Wissenschaften und der Literatur, Mainz

    Google Scholar 

  • Leprieur F, Olden JD, Lek S, Brosse S (2009) Contrasting patterns and mechanisms of spatial turnover for native and exotic freshwater fish in Europe. J Biogeogr 36:1899–1912

    Article  Google Scholar 

  • Leuschner C (1996) Timberline and alpine vegetation on the tropical and warm-temperate oceanic islands of the world: elevation structure and floristics. Vegetatio 123:193–206

    Article  Google Scholar 

  • Livingston DA (1967) Postglacial vegetation of Ruwenzori Mountains in equatorial Africa. Ecol Monogr 37:25–52

    Article  Google Scholar 

  • Lomolino MV, Weiser MD (2001) Towards a more general species-area relationship. Diversity on all islands great and small. J Biogeogr 28:431–445

    Article  Google Scholar 

  • MacArthur RH, Wilson EO (1967) Theory of island biogeography. Princeton University Press, Princeton

    Google Scholar 

  • Mahaney WC, Harmsen R, Spence JR (1991) Glacial-interglacial cycles and development of the Afroalpine ecosystem on East-African mountains: I. Glacial and postglacial geological record and paleoclimate of Mount Kenya. J Afr Earth Sci 12:505–512

    Article  Google Scholar 

  • Masao CA, Gizaw A, Pineiro R, Tusiime F, Wondimu T, Abdi AA, Popp M, Gussarova G, Lye KA, Munishi P, Nemomissa S, Brochmann C (2013) Phylogeographic history and taxonomy of some Afroalpine grasses assessed based on AFLPs and morphometry: Deschampsia cespitosa D. angusta and Koeleria capensis. Alp Bot. doi:10.1007/s00035-013-0119-2

    Google Scholar 

  • Messerli B, Winiger M (1992) Climate environmental-change and resources of the African mountains from the Mediterranean to the equator. Mt Res Dev 12:315–336

    Article  Google Scholar 

  • Miehe G, Miehe S (1994) Zur oberen Waldgrenze in tropischen Gebirgen. Phytocoenol 24:53–110

    Article  Google Scholar 

  • Mutke J, Barthlott W (2005) Patterns of vascular plant diversity at continental to global scales. Biol Skrift 55:521–531

    Google Scholar 

  • Oksanen J, Blanchet FG, Kindt R, Legendre P, O’Hara RB, Simpson GL, Solymos P, Stevens MHH, Wagner H (2011) Vegan community ecol package. In http://cranr-projectorg/ http://veganr-forger-projectorg/

  • Popp M, Gizaw A, Nemomissa S, Suda J, Brochmann C (2008) Colonization and diversification in the African ‘sky islands’ by Eurasian Lychnis L. (Caryophyllaceae). J Biogeogr 35:1016–1029

    Article  Google Scholar 

  • Puff C, Nemomissa S (2005) Plants of the Simen. A flora of the Simen mountains and surroundings northern Ethiopia. National Botanic Garden of Belgium, Meise

    Google Scholar 

  • R Development Core Team (2011) R a language and environment for statistical computing R Foundation for Statistical Computing Vienna Austria. http://www.R-projectorg

  • Royen PV (1979) Alpine flora of New Guinea. Cramer, Vaduz

    Google Scholar 

  • Ruggiero A, Hawkins BA (2008) Why do mountains support so many species of birds? Ecography 31:306–315

    Article  Google Scholar 

  • Schlüter T, Hampton C (1997) Geology of East Africa. Bornträger, Berlin

    Google Scholar 

  • Sepulchre P, Ramstein G, Fluteau F, Schuster M, Tiercelin JJ, Brunet M (2006) Tectonic uplift and eastern Africa aridification. Science 313:1419–1423

    Article  PubMed  CAS  Google Scholar 

  • Sklenář P, Dušková E, Balslev H (2011) Tropical and temperate evolutionary history of Páramo flora. Bot Rev 77:71–108

    Article  Google Scholar 

  • Sklenář P, Hedberg I, Cleef AM (2014) Island biogeography of tropical alpine floras. J Biogeogr 41:287–297

    Article  Google Scholar 

  • Smith AP (1994) Introduction to tropical alpine vegetation. In: Rundel PW, Smith AP, Meinzer FC (eds) Tropical alpine environments. Cambridge University Press, Cambridge, pp 1–20

    Chapter  Google Scholar 

  • Smith JMB, Cleef AM (1988) Composition and origins of the world’s tropical alpine floras. J Biogeogr 15:631–645

    Article  Google Scholar 

  • Suzuki R, Shimodaira H (2006) Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinf 22:1540–1542

    Article  CAS  Google Scholar 

  • Thompson LG, Mosley-Thompson E, Davis ME, Henderson KA, Brecher HH, Zagorodnov VS, Mashiotta TA, Lin PN, Mikhalenko VN, Hardy DR, Beer J (2002) Kilimanjaro ice core records. Evidence of Holocene climate change in tropical Africa. Science 298:589–593

    Article  PubMed  CAS  Google Scholar 

  • Tjørve E (2009) Shapes and functions of species-area curves (ii). A review of new models and parameterizations. J Biogeogr 36:1435–1445

    Article  Google Scholar 

  • Troll W (1948) Allgemeine Botanik ein Lehrbuch auf vergleichend-biologischer Grundlage. Enke, Stuttgart

    Google Scholar 

  • Troupin G (1978) Flore du Rwanda, Spermatophytes, Vol I. Musee Royal de l’Afrique Central, Tervuren

    Google Scholar 

  • Troupin G (1983) Flore du Rwanda, Spermatophytes, Vol II. Musee Royal de l’Afrique Central, Tervuren

    Google Scholar 

  • Troupin G (1985) Flore du Rwanda, Spermatophytes, Vol III. Musee Royal de l’Afrique Central, Tervuren

    Google Scholar 

  • Tsafack J-PF, Wandji P, Bardintzeff J-M, Bellon H, Guillon H (2009) The Mount Cameroon stratovolcano (Cameroon Volcanic Line Central Africa) petrology geochemistry isotope and age data. Geochem Miner Petrol 47:65–78

    CAS  Google Scholar 

  • Umer M, Lamb HF, Bonnefille R, Lezine A-M, Tiercelin J-J, Gibert E, Cazet J-P, Watrin J (2007) Late pleistocene and holocene vegetation history of the Bale mountains Ethiopia. Quat Sci Rev 26:2229–2246

    Article  Google Scholar 

  • Van Wyk AE, Smith GF (2001) Regions of floristic endemism in southern Africa a review with emphasis on succulents. Umdaus Press, Hatfield

    Google Scholar 

  • Wesche K, Miehe G, Kaeppeli M (2000) The significance of fire for Afroalpine ericaceous vegetation. Mt Res Dev 20:340–347

    Article  Google Scholar 

  • White F (1983) Vegetation of Africa a descriptive memoir to accompany the UNESCO/AETFAT/UNSO vegetation map of Africa. Unesco, Paris

    Google Scholar 

  • Whittaker RJ, Triantis KA, Ladle RJ (2008) A general dynamic theory of oceanic island biogeography. J Biogeography 35:977-994

  • Woldu Z, Feoli E, Nigatu L (1989) Partitioning an elevation gradient of vegetation from southeastern Ethiopia by probabilistic methods. Vegetatio 81:189–198

    Article  Google Scholar 

  • Wondimu T, Gizaw A, Tusiime FM, Masao CA, Abdi AA, Popp M, Nemomissa S, Brochman C (2014) Crossing barriers in an extremely fragmented system: two case studies in the Afroalpine sky island flora. Plant Syst Evol 300:415–430

    Article  Google Scholar 

  • WWF (2011) http://worldwildlifeorg/wildworld/profiles/terrestrial/aa/aa1002_fullhtml. Last accessed 01122011 now http://worldwildlife.org/ecoregions/aa1002

Download references

Acknowledgments

Mike Pirie is thanked for his support and suggestions on an earlier version of the manuscript. The work of B. Gehrke was supported by the German Research Foundation (project no. GE2347/1-1). I would like to thank the two anonymous reviewers for their insightful reviews and helpful comments.

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Gehrke, B., Linder, H.P. Species richness, endemism and species composition in the tropical Afroalpine flora. Alp Botany 124, 165–177 (2014). https://doi.org/10.1007/s00035-014-0132-0

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