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Rice functional genomics: decades’ efforts and roads ahead

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Abstract

Rice (Oryza sativa L.) is one of the most important crops in the world. Since the completion of rice reference genome sequences, tremendous progress has been achieved in understanding the molecular mechanisms on various rice traits and dissecting the underlying regulatory networks. In this review, we summarize the research progress of rice biology over past decades, including omics, genome-wide association study, phytohormone action, nutrient use, biotic and abiotic responses, photoperiodic flowering, and reproductive development (fertility and sterility). For the roads ahead, cutting-edge technologies such as new genomics methods, high-throughput phenotyping platforms, precise genome-editing tools, environmental microbiome optimization, and synthetic methods will further extend our understanding of unsolved molecular biology questions in rice, and facilitate integrations of the knowledge for agricultural applications.

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Acknowledgements

We apologize to any authors whose work may not have been cited owing to length restrictions. Researches in the authors’ laboratories are supported by the National Natural Science Foundation of China (31825015, 31921001, 31921004, 31991222, 32122012, 32002119, and 31788103) to X.H., S.Y., J.G., Y.L., B.W., Z.Z., and J.L., respectively.

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Correspondence to Daoxin Xie, Yaoguang Liu or Jiayang Li.

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Chen, R., Deng, Y., Ding, Y. et al. Rice functional genomics: decades’ efforts and roads ahead. Sci. China Life Sci. 65, 33–92 (2022). https://doi.org/10.1007/s11427-021-2024-0

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