The Revolutionary Impact of Landscapes in Biology

ISSN: 0092-0606 (Print) 1573-0689 (Online)

In this topical collection (13 articles)

  1. No Access

    Review

    Perspectives on the landscape and flux theory for describing emergent behaviors of the biological systems

    Jin Wang Pages 1-36

  2. Original Paper

    Exploring the folding energy landscapes of heme proteins using a hybrid AWSEM-heme model

    Xun Chen, Wei Lu, Min-Yeh Tsai, Shikai Jin… Pages 37-53
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  3. No Access

    Original Paper

    Thermodynamics of unfolding mechanisms of mouse mammary tumor virus pseudoknot from a coarse-grained loop-entropy model

    Ke Tang, Jorjethe Roca, Rong Chen, Anjum Ansari, Jie Liang Pages 129-150

  4. Original Paper

    Modulation of free energy landscapes as a strategy for the design of antimicrobial peptides

    Sergio A. Hassan, Peter J. Steinbach Pages 151-166
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  5. No Access

    Original Paper

    Fitness landscapes for coupled map lattices

    Noelle Driver, Michael Frame Pages 215-235

  6. Original Paper

    Spontaneous circulation of active microtubules confined by optical traps

    Stephen E Martin, Matthew E Brunner, Joshua M Deutsch Pages 237-251
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  7. No Access

    Original Paper

    “Flexible hinge” dynamics in mismatched DNA revealed by fluorescence correlation spectroscopy

    Timour B. Ten, Viktoriya Zvoda, Manas K. Sarangi… Pages 253-272

  8. Review

    Impact of Conformational Substates and Energy Landscapes on Understanding Hemoglobin Kinetics and Function

    William A. Eaton Pages 337-353
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  9. Review

    Predictive landscapes hidden beneath biological cellular automata

    Lars Koopmans, Hyun Youk Pages 355-369
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  10. Original Paper

    Exploring the energy landscape of a SAM-I riboswitch

    Christoph Manz, Andrei Yu Kobitski, Ayan Samanta… Pages 371-386
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  11. No Access

    Original Paper

    It doesn’t always pay to be fit: success landscapes

    Trung V. Phan, Gao Wang, Tuan K. Do, Ioannis G. Kevrekidis… Pages 387-400

  12. No Access

    Original Paper

    Energy landscapes and dynamics of ion translocation through membrane transporters: a meeting ground for physics, chemistry, and biology

    Sunil Nath Pages 401-433

  13. No Access

    Original Paper

    Learning the local landscape of protein structures with convolutional neural networks

    Anastasiya V. Kulikova, Daniel J. Diaz, James M. Loy… Pages 435-454