Abstract
Key message
An approach for restoring recombination activity of complementation split-Cre was developed to excise the transgene in hybrid progeny of GM crops.
Abstract
Growing concerns about the biosafety of genetically modified (GM) crops has currently become a limited factor affecting the public acceptance. Several approaches have been developed to generate selectable-marker-gene-free GM crops. However, no strategy was reported to be broadly applicable to hybrid crops. Previous studies have demonstrated that complementation split-Cre recombinase restored recombination activity in transgenic plants. In this study, we found that split-Cre mediated by split-intein Synechocystis sp. DnaE had high recombination efficiency when Cre recombinase was split at Asp232/Asp233 (866 bp). Furthermore, we constructed two plant expression vectors, pCA-NCre-In and pCA-Ic-CCre, containing NCre866-In and Ic-CCre866 fragments, respectively. After transformation, parent lines of transgenic Arabidopsis with one single copy were generated and used for hybridization. The results of GUS staining demonstrated that the recombination activity of split-Cre could be reassembled in these hybrid progeny of transgenic plants through hybridization and the foreign genes flanked by two loxP sites were efficiently excised. Our strategy may provide an effective approach for generating the next generation of GM hybrid crops without biosafety concerns.
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References
Chen S, Songkumarn P, Liu J, Wang GL (2009) A versatile zero background T-vector system for gene cloning and functional genomics. Plant Physiol 150:1111–1121
Clough SJ, Bent AF (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16:735–743
Daniell H, Ruiz ON, Dhingra A (2005) Chloroplast genetic engineering to improve agronomic traits. Methods Mol Biol 286:111–138
Darwish NA, Khan RS, Ntui VO, Nakamura I, Mii M (2014) Generation of selectable marker-free transgenic eggplant resistant to Alternaria solani using the R/RS site-specific recombination system. Plant Cell Rep 33:411–421
Ennifar E, Meyer JE, Buchholz F, Stewart AF, Suck D (2003) Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation. Nucleic Acids Res 31:5449–5460
Evans TC Jr, Martin D, Kolly R, Panne D, Sun L, Ghosh I, Chen L, Benner J, Liu XQ, Xu MQ (2000) Protein trans-splicing and cyclization by a naturally split intein from the dnaE gene of Synechocystis species PCC6803. J Biol Chem 275:9091–9094
Fraiture MA, Herman P, Taverniers I, De Loose M, Deforce D, Roosens NH (2015) Current and new approaches in GMO detection: challenges and solutions. Biomed Res Int 2015:392872
Gao X, Zhou J, Li J, Zou X, Zhao J, Li Q, Xia R, Yang R, Wang D, Zuo Z, Tu J, Tao Y, Chen X, Xie Q, Zhu Z, Qu S (2015) Efficient generation of marker-free transgenic rice plants using an improved transposon-mediated transgene reintegration strategy. Plant Physiol 167:11–24
Giovannetti M (2003) The ecological risks of transgenic plants. Riv Biol 96:207–223
Goldsbrough AP, Lastrella CN, Yoder JI (1993) Transposition mediated repositioning and subsequent elimination of marker genes from transgenic tomato. Nat Biotechnol 11:1286–1292
Gu W, Schneider JW, Condorelli G, Kaushal S, Mahdavi V, Nadal-Ginard B (1993) Interaction of myogenic factors and the retinoblastoma protein mediates muscle-cell commitment and differentiation. Cell 72:309–324
Guo F, Gopaul DN, van Duyne GD (1997) Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse. Nature 389:40–46
Han XZ, Han FY, Ren XS, Si J, Li CQ, Song HY (2013) Ssp DnaE split-intein mediated split-Cre reconstitution in tobacco. Plant Cell Tissue Organ C ult 113:529–542
Hirrlinger J, Scheller A, Hirrlinger PG, Kellert B, Tang W, Wehr MC, Goebbels S, Reichenbach A, Sprengel R, Rossner MJ, Kirchhoff F (2009) Split-cre complementation indicates coincident activity of different genes in vivo. PLoS One 4:e4286
Jefferson RA (1987) Assaying chimeric genes in plants: the GUS gene fusion system. Plant Mol Biol Rep 5:387–405
Jefferson RA, Kavanagh TA, Bevan MV (1987) GUS fusions: β-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J 6:3901–3907
Kane PM, Yamashiro CT, Wolczyk DF, Neff N, Goebl M, Stevens TH (1990) Protein splicing converts the yeast TFP1 gene product to the 69 kD subunit of the vacuolar H (+)-adenosine triphosphatase. Science 250:651–657
Kellendonk C, Tronche F, Monaghan AP, Angrand PO, Stewart F, Schütz G (1996) Regulation of Cre recombinase activity by the synthetic steroid RU 486. Nucleic Acids Res 24:1404–1411
Kempe K, Rubtsova M, Gils M (2014) Split-gene system for hybrid wheat seed production. Proc Natl Acad Sci USA 111:9097–9102
Komari T, Hiei Y, Saito Y, Murai N, Kumashiro T (1996) Vectors carrying two separate T-DNAs for co-transformation of higher plants mediated by Agrobacterium tumefaciens and segregation of transformants free from selection markers. Plant J 10:165–174
Kondrák M, van der Meer IM, Bánfalvi Z (2006) Generation of marker- and backbone-free transgenic potatoes by site-specific recombination and a bi-functional marker gene in a non-regular one-border Agrobacterium transformation vector. Transgenic Res 15:729–737
Luo KM, Duan H, Zhao DG, Zheng XL, Deng W, Chen YQ, Stewart CN, McAvoy R, Jiang XN, Wu YH, He AG, Pei Y, Li Y (2007) ‘GM-gene-deletor’: fused loxP-FRT recognition sequences dramatically improves efficiency of FLP or CRE recombinase transgene excision from pollen and seed of tobacco plants. Plant Biotechnol J 5:263–274
Miki B, McHugh S (2004) Selectable marker genes in transgenic plants: applications, alternatives and biosafety. J Biotechnol 107:193–232
Perler FB, Davis EO, Dean GE, Gimble FS, Jack WE, Neff N, Noren CJ, Thorner J, Belfort M (1994) Protein splicing elements: inteins and exteins—a definition of terms and recommended nomenclature. Nucleic Acids Res 22(7):1125–1127
Petyuk V, McDermott J, Cook M, Sauer B (2004) Functional mapping of Cre recombinase by pentapeptide insertional mutagenesis. J Biol Chem 279:37040–37048
Porebski S, Bailey LG, Baum BR (1997) Modification of a CTAB DNA extraction protocol for plants containing high polysaccharide and polyphenol components. Plant Mol Biol Rep 15:8–15
Van Duyne GD (2001) A structural view of cre-loxp site-specific recombination. Annu Rev Biophys Biomol Struct 30:87–104
Wang P, Chen T, Sakurai K, Han BX, He Z, Feng G, Wang F (2012) Intersectional Cre driver lines generated using split-intein mediated split-Cre reconstitution. Sci Rep 2:497
Wen M, Gao Y, Wang L, Ran L, Li J, Luo K (2014) Split-Cre complementation restores combination activity on transgene excision in hair roots of transgenic tobacco. PLoS One 9:e110290
Wong S, Mills E, Truong K (2012) Simultaneous assembly of two target proteins using split inteins for live cell imaging. Protein Eng Des Sel 26:207–213
Wu H, Hu Z, Liu XQ (1998) Protein trans-splicing by a split intein encoded in a split DnaE gene of Synechocystis sp. PCC6803. Proc Natl Acad Sci USA 95:9226–9231
Xu MQ, Evans TC Jr (2005) Recent advances in protein splicing: manipulating proteins in vitro and in vivo. Curr Opin Biotechnol 16:440–446
Yau YY, Stewart CN Jr (2013) Less is more: strategies to remove marker genes from transgenic plants. BMC Biotechnol 13:36
Yu C, Han F, Zhang J, Birchler J, Peterson T (2012) A transgenic system for generation of transposon Ac/Ds-induced chromosome rearrangements in rice. Theor Appl Genet 125:1449–1462
Zou X, Peng A, Xu L, Liu X, Lei T, Yao L, He Y, Chen S (2013) Efficient auto-excision of a selectable marker gene from transgenic citrus by combining the Cre/loxP system and ipt selection. Plant Cell Rep 32:1601–1613
Acknowledgments
This work was supported by the National Natural Science Foundation of China (31300990, 31370672 and 31171620), the National Key Project for Research on Transgenic Plants (2016ZX08010-003), the Natural Science Foundation Project of CQ CSTC (CSTC2013JJB8007) and the Fundamental Research Funds for the Central Universities (XDJK2013c147 and XDJK2014a005).
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Communicated by P. Lakshmanan.
J. Ge and L. Wang contributed equally to this work.
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Ge, J., Wang, L., Yang, C. et al. Intein-mediated Cre protein assembly for transgene excision in hybrid progeny of transgenic Arabidopsis . Plant Cell Rep 35, 2045–2053 (2016). https://doi.org/10.1007/s00299-016-2015-x
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DOI: https://doi.org/10.1007/s00299-016-2015-x