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Backbone NMR assignment of the yeast expressed Fab fragment of the NISTmAb reference antibody

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Abstract

The monoclonal antibody (mAb) protein class has become a primary therapeutic platform for the production of new life saving drug products. MAbs are comprised of two domains: the antigen-binding fragment (Fab) and crystallizable fragment (Fc). Despite the success in the clinic, NMR assignments of the complete Fab domain have been elusive, in part due to problems in production of properly folded, triply-labeled 2H,13C,15N Fab domain. Here, we report the successful recombinant expression of a triply-labeled Fab domain, derived from the standard IgG1κ known as NISTmAb, in yeast. Using the 2H,13C,15N Fab domain, we assigned 94% of the 1H, 13C, and 15N backbone atoms.

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Data Availability

The assigned 1H, 13C, 15N chemical shifts have been deposited in the BMRB (https://www.bmrb.wisc.edu/) under accession number 51696.

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Acknowledgements

The authors acknowledge the support by NIST Biomanufacturing Program and NIST for support of biomolecular NMR instrumentation.

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Contributions

YA,WO,JM&RB: Conceptualization; TS,KC,GG&RB: Investigation; TS&RB: Formal Analysis; TS:Validation; TS: Visualization; TS&RB: Writing-original draft; TS,KC,YA,WO,JM&RB: Writing-review and editing; RB:Supervision.

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Correspondence to Robert G. Brinson.

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The authors declare no conflict of interests.

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Certain commercial equipment, instruments, and materials are identified in this paper in order to specify the experimental procedure. Such identification does not imply recommendation or endorsement by the National Institute of Standards and Technology, nor does it imply that the material or equipment identified is necessarily the best available for the purpose.

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Solomon, T.L., Chao, K., Gingras, G. et al. Backbone NMR assignment of the yeast expressed Fab fragment of the NISTmAb reference antibody. Biomol NMR Assign 17, 75–81 (2023). https://doi.org/10.1007/s12104-023-10123-9

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  • DOI: https://doi.org/10.1007/s12104-023-10123-9

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