Skip to main content

Advertisement

Log in

An L-arabinose isomerase from Acidothermus cellulolytics ATCC 43068: cloning, expression, purification, and characterization

  • Biotechnologically Relevant Enzymes and Proteins
  • Published:
Applied Microbiology and Biotechnology Aims and scope Submit manuscript

Abstract

The araA gene encoding an L-arabinose isomerase (L-AI) from the acido-thermophilic bacterium Acidothermus cellulolytics ATCC 43068 was cloned and overexpressed in Escherichia coli. The open reading frame of the L-AI consisted of 1,503 nucleotides encoding 501 amino acid residues. The recombinant L-AI was purified to homogeneity by heat treatment, ion-exchange chromatography, and gel filtration. The molecular mass of the enzyme was estimated to be approximately 55 kDa by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The purified enzyme was optimally active at 75°C and pH 7.5. It required divalent metal ions, either Mn2+ or Co2+, for both enzymatic activity and thermostability improvement at higher temperatures. The enzyme showed relatively high activity and stability at acidic pH. It exhibited over 90% of its maximal activity at pH 6.0 and retained 80% of activity after 12 h incubation at pH 6.0. Catalytic property study showed that the enzyme had an interesting catalytic efficiency. Its apparent K m, V max, and catalytic efficiency (k cat/K m) for D-galactose was 28.9 mM, 4.9 U/mg, and 9.3 mM−1 min−1, respectively. The enzyme carried out the isomerization of D-galactose to D-tagatose with a conversion yield over 50% after 12 h under optimal conditions, suggesting its potential in D-tagatose production.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Barabote RD, Xie G, Leu DH et al (2009) Complete genome of the cellulolytic thermophile Acidothermus cellulolyticus 11B provides insights into its ecophysiological and evolutionary adaptations. Genome Res. doi:10.1101/gr.084848.108

    Google Scholar 

  • Buemann B, Toubro S, Raben A, Blundell J, Astrup A (2000) The acute effect of D-tagatose on food intake in human subjects. Br J Nutr 84:227–231

    CAS  Google Scholar 

  • Cheetham P, Wootton A (1993) Bioconversion of D-galactose into D-tagatose. Enzyme Microb Technol 15:105–108

    Article  CAS  Google Scholar 

  • Chouayekh H, Bejar W, Rhimi M, Jelleli K, Mseddi M, Bejar S (2007) Characterization of an L-arabinose isomerase from the Lactobacillus plantarum NC8 strain showing pronounced stability at acidic pH. FEMS Microbiol Lett 277:260–267

    Article  CAS  Google Scholar 

  • Dishe Z, Broenfreund E (1951) A new spectrophotometric method for the detection of keto sugars and trioses. J Biol Chem 192:583–587

    Google Scholar 

  • Donner TW, Wilber JF, Ostrowski D (1999) D-Tagatose, a novel hexose: acute effects on carbohydrate tolerance in subjects with and without type 2 diabetes. Diabetes Obes Metab 1:285–291

    Article  CAS  Google Scholar 

  • Illanes A (1999) Stability of biocatalysts process biotechnology. Electronic J Biotechnol 2:7–15

    CAS  Google Scholar 

  • Ishida Y, Kamiya T (1997) Cloning and characterization of the D-tagatose 3-epimerase gene from Pseudomonas cichorii ST-24. J Ferment Bioeng 83:529–534

    Article  CAS  Google Scholar 

  • Jørgensen F, Hansen O, Stougaard P (2004) Enzymatic conversion of D-galactose to D-tagatose: heterologous expression and characterisation of a thermostable L-arabinose isomerase from Thermoanaerobacter mathranii. Appl Microbiol Biotechnol 64:816–822

    Article  CAS  Google Scholar 

  • Kim P (2004) Current studies on biological tagatose production using L-arabinose isomerase: a review and future perspective. Appl Microbiol Biotechnol 65:243–249

    CAS  Google Scholar 

  • Kim HJ, Oh DK (2005) Purification and characterization of an l-arabinose isomerase from an isolated strain of Geobacillus thermodenitrificans producing d-tagatose. J Biotechnol 120:162–173

    Article  CAS  Google Scholar 

  • Kim BC, Lee YH, Lee HS, Lee DW, Choe EA, Pyun YR (2002) Cloning, expression and characterization of L-arabinose isomerase from Thermotoga neapolitana: bioconversion of D-galactose to D-tagatose using the enzyme. FEMS Microbiol Lett 212:121–126

    CAS  Google Scholar 

  • Kim HJ, Ryu SA, Kim P, Oh DK (2003a) A feasible enzymatic process for D-tagatose production by an immobilized thermostable L-arabinose isomerase in a packed-bed bioreactor. Biotechnol Prog 19:400–404

    Article  CAS  Google Scholar 

  • Kim JW, Kim YW, Roh HJ, Kim HY, Cha JH, Park KH, Park CS (2003b) Production of tagatose by a recombinant thermostable L-arabinose isomerase from Thermus sp. IM6501. Biotechnol Lett 25:963–967

    Article  CAS  Google Scholar 

  • Kim HJ, Hyun EK, Kim YS, Lee YJ, Oh DK (2006) Characterization of an Agrobacterium tumefaciens D-psicose-3-epimerase that converts D-fructose to D-psicose. Appl Environ Microbiol 72:981–985

    Article  CAS  Google Scholar 

  • Lee DW, Jang HJ, Choe EA (2004) Characterization of a thermostable L-arabinose (D-galactose) isomerase from the hyperthermophilic eubacterium Thermotoga maritima. Appl Environ Microbiol 70:1397–1404

    Article  CAS  Google Scholar 

  • Lee DW, Choe EA, Kim SB, Eom SH, Hong YH, Lee SJ, Lee HS, Lee DY, Pyun YR (2005a) Distinct metal dependence for catalytic and structural functions in the L-arabinose isomerase from the mesophilic Bacillus halodurans and the thermophilic Geobacillus stearothermophilus. Arch Biochem Biophys 434:333–343

    Article  CAS  Google Scholar 

  • Lee SJ, Lee DW, Choe EA, Hong YH, Kim SB, Kim BC, Pyun YR (2005b) Characterization of a thermoacidophilic L-arabinose isomerase from Alicyclobacillus acidocaldarius: role of Lys-269 in pH optimum. Appl Environ Microbiol 71:7888–7896

    Article  CAS  Google Scholar 

  • Levin GV (2002) Tagatose, the new GRAS sweetener and health product. J Med Food 5:23–36

    Article  CAS  Google Scholar 

  • Lowry OH, Rosenbroughn NJ, Farr AL, Randall RJ (1951) Protein measurement with the Folin phenol reagent. J Biol Chem 193:256–275

    Google Scholar 

  • Lu Y, Levin GV, Donner TW (2008) Tagatose, a new antidiabetic and obesity control drug. Diabetes Obes Metab 10:109–134

    Article  CAS  Google Scholar 

  • Manjasetty BA, Chance MR (2006) Crystal structure of Escherichia coli L-arabinose isomerase (ECAI), the putative target of biological tagatose production. J Mol Biol 360:297–309

    Article  CAS  Google Scholar 

  • Mendoza MR, Olano A, Villamiel M (2005) Chemical indicators of heat treatment in fortified and special milks. J Agric Food Chem 53:2995–2999

    Article  CAS  Google Scholar 

  • Mohagheghi A, Grohmann K, Himmel M, Updegraff DM (1986) Isolation and characterization of Acidothermus cellulolytics gen. nov., sp. nov., a new genus of thermophilic, acidophilic, cellulolytic bacteria. Int J Syst Bacteriol 36:435–443

    Article  CAS  Google Scholar 

  • Nakamatu T, Yamanaka K (1969) Crystallization and properties of L-arabinose isomerase from Lactobacillus gayonii. Biochim Biophys Acta 178:156–165

    CAS  Google Scholar 

  • Oh DK (2007) Tagatose: properties, applications, and biotechnological processes. Appl Microbiol Biotechnol 76:1–8

    Article  CAS  Google Scholar 

  • Patrick JW, Lee N (1968) Purification and properties of an L-arabinose isomerase from Escherichia coli. J Biol Chem 243:4312–4318

    CAS  Google Scholar 

  • Poonperm W, Takata G, Okada H, Morimoto K, Granström TB, Izumori K (2007) Cloning, sequencing, overexpression and characterization of L-rhamnose isomerase from Bacillus pallidus Y25 for rare sugar production. Appl Microbiol Biotechnol 76:1297–1307

    Article  CAS  Google Scholar 

  • Prabhu P, Tiwari MK, Jeya M, Gunasekaran P, Kim IW, Lee JK (2008) Cloning and characterization of a novel L-arabinose isomerase from Bacillus licheniformis. Appl Microbiol Biotechnol 81:283–290

    Article  CAS  Google Scholar 

  • Rhimi M, Bejar S (2006) Cloning, purification and biochemical characterization of metallic-ions independent and thermoactive L-arabinose isomerase from the Bacillus stearothermophilus US100 strain. Biochim Biophys Acta 1760:191–199

    CAS  Google Scholar 

  • Rollini M, Manzoni M (2005) Bioconversion of D-galactitol to tagatose and dehydrogenase activity induction in Gluconobacter oxydans. Process Biochem 40:437–444

    Article  CAS  Google Scholar 

  • Rosenplenter K, Mende K (2004) Use of D-tagatose for improving aroma and flavor in foods and beverages WO patent 2004/073419

  • Saito H, Miura K (1963) Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72:619–629

    Article  CAS  Google Scholar 

  • Troyono E, Martinez-Castro I, Olano A (1992) Kinetics of galactose and tagatose formation during heat-treatment of milk. Food Chem 45:41–43

    Article  Google Scholar 

  • Yoon SH, Kim P, Oh DK (2003) Properties of L-arabinose isomerase from Escherichia coli as biocatalysis for tagatose production. World J Microbiol Biotechnol 19:47–51

    Article  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported by the grants from the National High Technology “863” Program of China, Project No. 2006AA10Z334, the Natural Science Foundation of China, Project No. 20906040, the Natural Science Foundation of Jiangsu Province, Project No. BK2008099 and BK2008003, the Research Program of State Key Laboratory of Food Science and Technology, Jiangnan University, Project No. SKLF-MB-200804 and SKLF-TS-200805, the Specialized Research Fund for the Doctoral Program of Higher Education, Project No. 200802951024, and the Program for Innovative Research Team of Jiangnan University, Project No. 2008CXTD01.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Bo Jiang.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Cheng, L., Mu, W., Zhang, T. et al. An L-arabinose isomerase from Acidothermus cellulolytics ATCC 43068: cloning, expression, purification, and characterization. Appl Microbiol Biotechnol 86, 1089–1097 (2010). https://doi.org/10.1007/s00253-009-2322-z

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00253-009-2322-z

Keywords

Navigation