Skip to main content
Log in

Anoxybacillus sp. AH1, an α-amylase-producing thermophilic bacterium isolated from Dargeçit hot spring

  • Published:
Biologia Aims and scope Submit manuscript

Abstract

The present study was conducted to isolate α-amylase-producing thermophilic bacteria from DargeÇit hot springs in Turkey. The morphological, biochemical and physiological characterisation, as well as genetic analysis by 16S rRNA sequences indicated that the isolated strain AH1 was a member of Anoxybacillus genus. The strain was aerobe, Gram-positive and spore-forming rod, exhibiting optimum growth temperature and pH of 60°C and 7.0–7.5, respectively. Optimization of growth medium and enzyme assay conditions for extracellular α-amylase production by the novel thermophilic Anoxybacillus sp. AH1 were carried out in many different media containing a variety of carbon and nitrogen sources. Among various carbon and nitrogen sources, peptone (2054.1 U/mL) at 1% and maltose (1862.9 U/mL) at 0.5% increased α-amylase activity, compared to controls. Moreover, a high enzyme production was observed with potato starch at 0.5% and 1% (2668.4 U/mL and 3627 U/mL, respectively), as well as with 1% soluble starch (2051.9 U/mL). The enzyme activity was found to be rather high in the presence of CaCl2 up to 100 mM.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

BM:

basal medium

LB:

Luria broth

NB:

nutrient broth

TLC:

thin-layer chromatography

References

  • Aiyer P.V.D. 2004. Effect of C:N ratio on α-amylase production by Bacillus licheniformis SPT 27. Afr. J. Biotechnol. 3: 519–522.

    Article  CAS  Google Scholar 

  • Altschul S.F., Gish W., Miller W., Myers E.W. & Lipman D.J. 1990. Basic local alignment search tool. J. Mol. Biol. 215. 403–410.

    Article  CAS  PubMed  Google Scholar 

  • Asgher M., Asad M.J., Rahman S.U. & Legge R.L. 2007. A thermostable α-amylase from a moderately thermophilic Bacillus subtilis strain for starch processing. J. Food. Eng. 79. 950–955.

    Article  CAS  Google Scholar 

  • Belduz A.O., Dulger S. & Demirbag Z. 2003. Anoxybacillus gonensis sp. nov., a moderately thermophilic, xylose-utilizing, endospore-forming bacterium. Int. J. Syst. Evol. Microbiol. 53. 1315–1320.

    Article  CAS  PubMed  Google Scholar 

  • Bernfeld P. 1955. Amylases, α and β. Methods Enzymol. 1. 149–158

    Article  CAS  Google Scholar 

  • Chai Y.Y., Kahar U.M., Salleh M.M., Illias R.M. & Goh K.M. 2012a. Isolation and characterization of pullulan-degrading Anoxybacillus species isolated from Malaysian hot springs. Environ. Technol. 33. 1231–1238.

    Article  CAS  PubMed  Google Scholar 

  • Chai YY, Rahman RN, Illias RM, Goh KM. 2012b. Cloning and characterization of two new thermostable and alkalitolerant α-amylases from the Anoxybacillus species that produce high levels of maltose. J. Ind. Microbiol. Biotechnol. 39. 731–741.

    Article  CAS  PubMed  Google Scholar 

  • Cihan A.C., Ozcan B. & Cokmus C. 2011. Anoxybacillus salavatliensis sp. nov., an α-glucosidase producing, ther-mophilic bacterium isolated from Salavatli, Turkey. J. Basic Microbiol. 51. 136–146.

    Article  CAS  PubMed  Google Scholar 

  • Cordeiro C.A.M., Martins M.L.L. & Luciano A.B. 2002. Production and properties of α-amylase from thermophilic Bacillus sp. Braz. J. Microbiol. 33. 57–61.

    Article  CAS  Google Scholar 

  • Das K., Doley R. & Mukherjee A.K. 2004. Purification and biochemical characterization of a thermostable, alkaliphilic, extracellular α-amylase from Bacillus subtilis DM-03, a strain isolated from the traditional fermented food of India. Biotechnol. Appl. Biochem. 40. 291–298.

    Article  CAS  PubMed  Google Scholar 

  • De Clerck E., Rodríguez-Díaz M., Vanhoutte T., Heyrman J., Logan N.A., De Vos P. 2004. Anoxybacillus contaminans sp. nov. and Bacillus gelatini sp. nov., isolated from contaminated gelatin batches. Int. J. Syst. Evol. Microbiol. 54. 941–946.

    Article  PubMed  CAS  Google Scholar 

  • Deep K., Poddar A. & Das S.K. 2013. Anoxybacillus suryakundensis sp. nov, a moderately thermophilic, alkalitolerant bacterium isolated from hot spring at Jharkhand, India. PLoS One 8: e85493.

    Article  CAS  Google Scholar 

  • Derekova A., Sjøholm C., Mandeva R. & Kambourova M. 2007. Anoxybacillus rupiensis sp. nov., a novel thermophilic bacterium isolated from Rupi basin (Bulgaria). Extremophiles 11: 577–583.

    Article  PubMed  Google Scholar 

  • Devi B., Unni B.G., Wann S.B. & Samanta R. 2012. A study on partial purification and characterization of extracellular amylases from Bacillus subtilis. Adv. Appl. Sci. Res. 3. 2739–2744.

    CAS  Google Scholar 

  • Dulger S., Demirbag Z. & Belduz A.O. 2004. Anoxybacillus ayderensis sp. nov. and Anoxybacillus kestanbolensis sp. nov. Int. J. Syst. Evol. Microbiol. 54. 1499–1503.

    Article  CAS  PubMed  Google Scholar 

  • Dussault H.P. 1955. An improved technique for staining for halophilic bacteria. J. Bacteriol. 70. 484–485.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Felsenstein J. 1993. PHYLIP (Phylogeny Inference Package), version 3.5.1., University of Washington, Seattle, USA.

    Google Scholar 

  • Goh K.M., Kahar U.M., Chai Y.Y., Chong C.S., Chai K.P., Ranjani V., Illias R.M. & Chan K.G. 2013. Recent discoveries and applications of Anoxybacillus. Appl. Microbiol. Biotechnol. 97. 1475–1488.

    Article  CAS  PubMed  Google Scholar 

  • Goh K.M., Gan H.M., Chan K.G., Chan G.R., Chan G.F., Shabar S., Chong C.S., Kahar U.M. & Chai K.P. 2014. Analysis of Anoxybacillus genomes from the aspects of a lifestyle adaptations, arophage diversity, and carbohydrate metabolism. PLoS One 9: e90549.

    Article  CAS  Google Scholar 

  • Gordon R.H.W.C. & Pang C.H.N. 1973. The Genus Bacillus. Washington, D.C., USA.

    Google Scholar 

  • Gul-Güven R., Güven K., Poli A. & Nicolaus B. 2008. Anoxybacillus kamchatkensis subsp. asaccharedens subsp. nov., a thermophilic bacterium isolated from a hot spring in Batman. J. Gen. Appl. Micbiobol. 54. 327–334.

    Article  Google Scholar 

  • Hamilton L.M., Kelly C.T. & Fogarty W.M. 1999. Production and properties of the raw starch-digesting α-amylase of Bacillus sp. IMD 435. Process Biochem. 35. 27–31.

    Article  CAS  Google Scholar 

  • Hauli I., Sarkar B., Mukherjee T. & Mukhopadhyay S.K. 2013. Isolation and identification of a novel thermo-alkaline, thermostable, SDS and chelator resistant amylase producing Anoxybacillus sp. IB-A from hot spring of Bakreswar, West Bengal (India): first report. Adv. Appl. Sci. Res. 4. 202–212.

    CAS  Google Scholar 

  • Heinen W., Lauwers A.M. & Mulders J.W.M. 1982. Bacillus flavothermus, a newly isolated facultative thermophile. Antonie van Leeuwenhoek 48: 265–272.

    Article  CAS  PubMed  Google Scholar 

  • Inan K., Belduz A.O. & Canakci S. 2013. Anoxybacillus kaynarcensissp. nov., a moderately thermophilic, xylanase producing bacterium. J. Basic Microbiol. 53. 410–419.

    Article  CAS  PubMed  Google Scholar 

  • Janecek S., Svensson B. & MacGregor E.A. 2014. α-Amylase: an enzyme specificity found in various families of glycoside hydrolases. Cell. Mol. Life Sci. 71. 1149–1170.

    Article  CAS  PubMed  Google Scholar 

  • Kanimozhi M., Johny M., Gayathri N. & Subashkumar R. 2014. Optimization and production of α-amylase from halophilic Bacillus species isolated from Mangrove soil sources. J. Appl. Environ. Microbiol. 2. 70–73.

    Google Scholar 

  • Kevbrin V.K., Zengler K., Lysenko A.M. & Wiegel J. 2005. Anoxybacillus kamchatkensis sp. nov., a novel thermophilic facultative aerobic bacterium with a broad pH optimum from the Geyser valley, Kamchatka. Extremophiles 9: 391–398.

    Article  CAS  PubMed  Google Scholar 

  • Khan J.A. & Priya R. 2011. A study on partial purification and characterization of extracellular amylases from Bacillus subtilis. Adv. Appl. Sci. Res. 2. 509–519.

    CAS  Google Scholar 

  • Kikani B.A. & Singh S.P. 2012. The stability and thermodynamic parameters of a very thermostable and calcium-independent α-amylase from a newly isolated bacterium, Anoxybacillus beppuensis TSSC-1. Process Biochem. 47. 1791–1798.

    Article  CAS  Google Scholar 

  • Kim O.S., Cho Y.J., Lee K., Yoon S.H., Kim M., Na H., Park S.C., Jeon Y.S., Lee J.H., Yi H., Won S. & Chun J. 2012. Introducing EzTaxon: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int. J. Syst. Evol. Microbiol. 62. 716–721.

    Article  CAS  PubMed  Google Scholar 

  • Konsoula Z. & Liakopoulou-Kyriakides M. 2007. Co-production of α-amylase and β-galactosidase by Bacillus subtilis in complex organic substrates. Bioresour. Technol. 98. 150–157.

    Article  CAS  PubMed  Google Scholar 

  • Lanyi B. 1987. Classical and rapid identification methods for medically important bacteria. Methods Microbiol. 19. 1–67.

    CAS  Google Scholar 

  • Lowry O.H., Rosebrough N.J. & Farr A.L. & Randall R.J. 1951. Protein measurement with the Folin phenol reagent. J. Biol. Chem. 193. 265–275.

    CAS  PubMed  Google Scholar 

  • Maidak B.L., Cole J.R., Parker C.T.J., Garrity G.M., Larsen N., Li B., Lilburn T.G., Mc Caughey M.J., Olsen G. J., Overbeek R., Pramanik S., Schmidt T.M., Tiedje J.M. & Woese C.R. 1999. A new version of the RDP (Ribosomal Database Project). Nucleic Acids Res. 27. 171–173.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Matpan Bekler F. & Güven K. 2014. Isolation and production of thermostable α-amylase from thermophilic Anoxybacillus sp. KP1 from Diyadin hot spring in Ağri, Turkey. Biologia 69: 419–427.

    Article  CAS  Google Scholar 

  • Nicolaus B., Manca M.C. Lama L., Esposito E. & Gambacorta A. 2001. Lipid modulation by environmental stresses in two models of extremophiles isolated from Antarctica. Polar Biol. 24. 1–8.

    Article  Google Scholar 

  • Pikuta E., Cleland D. & Tang J. 2003. Aerobic growth of Anoxy-bacillus pushchinoensis K1T: emended descriptions of A. pushchinoensis and the genus Anoxybacillus. Int. J. Syst. Evol. Microbiol. 53. 1561–1562.

    Article  CAS  PubMed  Google Scholar 

  • Pikuta E., Lysenko A., Chuvilskaya N., Mendrock U., Hippe H., Suzina N., Nikitin D., Osipov G. & Laurinavichius K. 2000. Anoxybacillus pushchinensis gen. nov., sp. nov., a novel anaerobic, alkaliphilic, moderately thermophilic bacterium from manure, and description of Anoxybacillus flavithermus comb. nov. Int. J. Syst. Evol. Microbiol. 50. 2109–2117.

    Article  CAS  PubMed  Google Scholar 

  • Poli A., Esposito E., Lama L., Orlando P., Nicolaus G., Appolonia F., Gambacorta A. & Nicolaus B. 2006. Anoxybacillus amylolyticus sp. nov., a thermophilic amylase producing bacterium isolated from Mount Rittmann (Antarctica). Syst. Appl. Microbiol. 29. 300–307.

    Article  CAS  PubMed  Google Scholar 

  • Poli A., Romano I., Cordella P., Orlando P., Nicolaus B. & Ceschi Berrini C. 2009. Anoxybacillus thermarum sp. nov., a novel thermophilic bacterium isolated from thermal mud in Eu-ganean hot springs, Abano Terme, Italy. Extremophiles 13: 867–874.

    Article  PubMed  Google Scholar 

  • Prakash B., Vidyasagar M., Madhukumar M.S., Muralikrishna G. & Sreeramulu K. 2009. Production, purification, and characterization of two extremely halotolerant, thermostable, and alkali-stable α-amylases from Chromohalobacter sp. TVSP 101. Process Biochem. 44. 210–215.

    Article  CAS  Google Scholar 

  • Rainey F.A., Fritze D. & Stackebrandt E. 1994. The phylogenetic diversity of thermophilic members of the genus Bacillus as revealed by 16S rRNA analysis. FEMS Microbiol. Lett. 115. 205–212.

    Article  CAS  PubMed  Google Scholar 

  • Rainey F.A., Ward-Rainey N., Kroppenstedt R.M. & Stackbrandt E. 1996. The genus Nocardiopsis represents a phyloge-netically coherent taxon and a distinct Actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int. J. Syst. Bacteriol. 46. 1088–1092.

    Article  CAS  PubMed  Google Scholar 

  • Ranjani V., Janecek S., Chai K.W., Shahir S., Abdul Rahman R.N., Chan K.G. & Goh K.M. 2014. Protein engineering of selected residues from conserved sequence regions of a novel Anoxybacillus α-amylase. Sci. Rep. 4. 5850.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Saitou N. & Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4. 406–425.

    CAS  PubMed  Google Scholar 

  • Saw J.H., Mountain B.W., Feng L., Omelchenko M.W., Hou S., Saito J.A., Stott, M.B., Li D., Zhao G., Wu J., Galperin M.Y., Koonin E.V., Makarova K.S., Wolf Y.I., Rigden D.J., Dun-field P.F., Wang L. & Alam M. 2008. Encapsulated in silica: genome, proteome and physiology of the thermophilic bacterium Anoxybacillus flavithermus WK1. Genome Biol. 9. R161.

    Article  CAS  Google Scholar 

  • Tawil G., Viksø-Nielsen A., Rolland-Sabaté A., Colonna P. & Buléon A. 2012. Hydrolysis of concentrated raw starch: a new very efficient α-amylase from Anoxybacillus flavother-mus. Carbohydr. Polym. 87. 46–52.

    Article  CAS  PubMed  Google Scholar 

  • Yang S.J., Lee H.S., Park C.S., Kim Y.R., Moon T.W. & Park K.H. 2004. Enzymatic analysis of an amylolytic enzyme from the hyper-thermophilic archaeon Pyrococcus furiosus reveals its novel catalytic properties as both an α-amylase and a cyclodextrin-hydrolyzing enzyme. Appl. Environ. Microbiol. 70. 5988–5995.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Yang X., Zhang F., Ren W., Nie G., Li S., Ming H., Tang S., Zhang L. & Li W. 2012. A study on the best condition for thermostable α-amylase fermented by response surface methodology by strain Anoxybacillus sp. YIM 342. Journal of Yunnan University 4: 490–496.

    Google Scholar 

  • Yumoto I., Hirota K., Kawahara T., Nodasaka Y., Okuyama H., Matsuyama H., Yokota Y., Nakajima K. & Hoshino T. 2004. Anoxybacillus voinovskiensis sp. nov., a moderately thermophilic bacterium from a hot spring in Kamchatka. Int. J. Syst. Evol. Microbiol. 54. 1239–1242.

    Article  CAS  PubMed  Google Scholar 

  • Zhang C.M., Huang, X.W., Pan W.Z., Zhang J., Wei K.B., Klenk H.P., Tang S.K., Li W.J. & Zhang, K. 2010. Anoxybacillus tengchongensis sp. nov. and Anoxybacillus eryuanensis sp. nov., facultatively anaerobic, alkalitolerant bacteria from hot springs. Int. J. Syst. Evol. Microbiol. 61. 118–122.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Ömer Acer.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Acer, Ö., Pirinççioğlu, H., Matpan Bekler, F. et al. Anoxybacillus sp. AH1, an α-amylase-producing thermophilic bacterium isolated from Dargeçit hot spring. Biologia 70, 853–862 (2015). https://doi.org/10.1515/biolog-2015-0111

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1515/biolog-2015-0111

Key words

Navigation