Abstract
Mahsuri a popular traditional variety and the first rain-fed mega variety of the Indian sub- continent. It is highly susceptible to bacterial leaf blight caused by Xanthomonas oryzae pv.oryzae. Nine best performing families of Mahsuri pyramid containing four bacterial blight resistance genes (Xa4, xa5, xa13 and Xa21) were evaluated for agronomic, yield and its related characters viz. days to 50% flowering, plant height, number of tillers, panicle length, filled grains per panicle, grain weight, and yield under natural and disease pressure conditions for three consecutive wet seasons. In addition these pyramids were also evaluated for three different spacings to find out the optimum spacing under disease free and disease pressure conditions.
Results revealed that under disease free conditions there was no significant difference between the pyramids and the parent for the characters evaluated in each spacing. However characters plant height, number of tillers, panicle length, filled grains per panicle, yield per plant and yield per sq. m. showed significant variation between the different spacings across seasons. Under heavy disease pressure the parent exhibited highly susceptible reaction whereas the pyramid families were highly resistant. A wider spacing had less yield loss when compared to dense planting under BB infestation in case of parent. There was no such yield loss in the pyramid families.
When yield per sq. m. was taken into consideration the 20 × 20 cm spacing showed the highest yield when compared to the other two spacings since number of plants were more. The pyramids insulated the yield loss against bacterial leaf blight and are a gain to the farmers to help overcome the heavy yield losses due to this disease. These pyramids have the potential to replace the parent and can be used directly. In addition they can be used as donors for bacterial blight resistance in any breeding program.
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Abbreviations
- ANOVA:
-
analysis of variance
- BB:
-
bacterial blight
- CFU:
-
colony forming units
- DFF:
-
days to 50% flowering
- FG/P:
-
filled grains per panicle
- G:
-
genotype
- GW:
-
grain weight
- LSD:
-
least significant difference
- MAS:
-
marker assisted selection
- NT:
-
number of tillers per plant
- PH:
-
plant height
- PL:
-
panicle length
- S:
-
season
- SPC:
-
spacing
- SSR:
-
simple sequence repeats
- STS:
-
sequence tagged sites
- T:
-
treatment
- Xoo :
-
xanthomonas oryzae pv. Oryzae
- Y/P:
-
yield per plant
References
Baloch AW, Soomro AM, Javed MA, Ahmed M, Bughio HR, Bughio MS. 2002. Optimum plant density for high yield in rice (Oryza sativa L.). Asian J. Plant Sci. 1: 114–116
Basavaraj SH, Singh VK, Singh A, Singh A, Singh A et al. 2010. Marker-assisted improvement of bacterial blight resistance in parental lines of Pusa RH10, a superfine grain aromatic rice hybrid. Mol. Breed. 26: 293–305
Blair MW, Mc Couch SR. 1997. Microsatellite and sequence-tagged site markers diagnostic for the rice bacterial blight resistance gene xa5. Theor. Appl. Genet. 95: 174–184
Chandarkar BL, Khan RA. 1981. Optimum spacing for early, medium and late duration tall indica rice cultivars. Oryza 18: 108–110
Collard, Iftekharuddaula, Thomson, Pamplona, Mackill. 2008. Relevance of backcross breeding in rice. GCP Online Crop Bioinformatics Course, GCP McClintock Bioinformatics Resource - MAS
Debabrata N, Shanti ML, Bose LK, Singh UD, Nayak P. 2008. Pathogenicity association in Xanthomonas oryzae pv. oryzae, the causal organism of rice bacterial blight disease. J. Agric. Biol. Sci. 3:12–26
Dellaporta SL, Wood J, Hicks B. 1983. A plant molecular DNA mini preparation. Plant Mol. Biol. Rep. 1: 19–21
Directorate of Rice Research. 2006. Progress Report, Vol. 2, Crop Protection (Entomology, Plant Pathology), pp 353
Garret K, Deny S, Frank E, Rouse M, Travers S. 2006. Climate change effects on plant disease: Genomes to ecosystems. Ann. Rev. Plant Pathol. 44: 489–509
Hamidul Islam MD, Altaf Hossain SM. 2002. Effect of fertilization and planting density on the yield of two varieties of fine rice. Pak. J. Biol. Sci. 5: 513–516
Hittalmani S, Parco A, Mew TV, Zeigler RS, Huang N. 2000. Fine mapping and DNA marker-assisted pyramiding of the three major genes for blast resistance in rice. Theor. Appl. Genet. 100: 1121–1128
Huang N, Angeles ER, Domingo J, Magpantay G, Singh S. 1997. Pyramiding of bacterial blight resistance genes in rice: Marker-assisted selection using RFLP and PCR. Theor. Appl. Genet. 95: 313–320
Joseph M, Gopalakrishnan S, Sharma RK, Singh VP, Singh AK, Singh NK, Mohapatra T. 2004. Combining bacterial blight resistance and Basmati quality characteristics by phenotypic and molecular marker-assisted selection in rice. Mol. Breed. 13: 377–387
Karaganilla A, Natural MP, Ou SH. 1973. A comparative study of culture media of Xanthomonas oryzae pv. oryzae. Philipp. Agric. 57: 141–152
Kauffman HE, Reddy APK, Hsieh SPY, Merca SD. 1973. An improved technique for evaluating resistance of rice varieties to Xanthomonas oryzae. Plant Dis. Rep. 57: 537–541
Md. Bahadur Meah. 1987. Effect of nitrogen and plant spac ing on bacterial leaf blight of rice. Curr. Plant Sci. Biotechnol. Agric. 4: 950–954
Miah MHN, Karim MA, Rahman MS, Islam MS. 1990. Performance of Nizersail mutants under different row spacings. Bangl. J. Train. Dev. 3: 3–34
Narayanan NN, Baisakh N, Oliva NP, Vera Cruz CV, Gnanmanickam SS, Datta K, Datta SK. 2004. Markerassisted selection combined with biolistic transformation for blast and bacterial blight resistance in indica rice (cv.Co39). Mol. Breed. 14: 6–67
Ou SH. 1985. Rice disease. 2nd Ed., Common wealth Mycological Institute (CMI), Kew, Surrey, pp 38
Reddy APK. 1980. Report on bacterial leaf blight epidemic of rice in Punjab. All India Coordinated Rice Improvement Project. Rajendranagar, Hyderabad, India, pp 1–30
Reddy APK. 1989. Bacterial blight: crop loss assessment and disease management In Proc. Int. Workshop Bacterial Blight of Rice. Int. Rice Res. Inst., pp 79–88
Ronald PC, Albano B, Tabien LA, Wu K, Mc Couch S, Tanksley S. 1992. Genetic and physical mapping of the rice bacterial blight resistance locus, Xa21. Mol. Gen. Genet. 235: 113–120
Salgotra RK, Gupta BB, Millwood RJ, Balasubramanian M, Stewart Jr CN. 2012. Introgression of bacterial leaf blight resistance and aroma genes using functional marker-assisted selection in rice (Oryza sativa L.). Euphytica 187: 313–323
Sanchez AC, Brar DS, Haung N, Li Z, Khush GS. 2000. Sequence tagged site marker assisted selection for three bacterial blight resistance genes in rice. Crop Sci. 40: 792–797
Shanti ML, George MLC, Cruz CMV, Bernardo MA, Nelson RJ. 2001. Identification of resistance genes effective against rice bacterial blight pathogen in Eastern India. Plant Dis. 85: 506–512
Shanti ML, Shenoy VV. 2005. Evaluation of resistance genes and their pyramids against rice bacterial leaf blight pathogen Xanthomonas oryzae pv. oryzae. Oryza 42: 169–173
Shanti ML, Lalitha Devi G, Naveen Kumar G, Shashidhar HE. 2010c. Molecular Marker-Assisted Selection: A tool for insulating parental lines of hybrid rice against bacterial leaf blight. Int. J. Plant Pathol. 1: 114–123
Shanti ML, Mohan Kumar Varma C, Premalatha P, Lalitha Devi G, Zehr U, Freeman W. 2010b. Understanding the bacterial blight pathogen combining pathotyping and molecular marker studies. Int. J. Plant Pathol. 1: 58–68
Shanti ML, Shenoy VV, Lalitha Devi G, Mohan Kumar V, Premalatha P, Naveen Kumar G, Shashidhar HE, Zehr UB, Freeman H. 2010a. Marker-Assisted breeding for resistance to bacterial leaf blight in popular cultivar and parental lines of hybrid rice. J. Plant Pathol. 92: 495–501
Singh S, Sodhi M, Vikal Y, George MLC, Bala GS, Mangat GS, Garg M, Sidhu JS, Dhaliwal HS. 2003. DNA fingerprinting and virulence analysis of Xanthomonas oryzae pv. oryzae isolates from Punjab, northern India. Euphytica. 130: 107–115
Sundaram RM, Vishnupriya MR, Biradar SK, Laha GS, Reddy GA. 2008. Marker-assisted introgression of bacterial blight resistance in Samba Mahsuri, an elite indica rice variety. Euphytica 160: 411–422
Weewaroth K, Kadkoa S, Sindhusake C, Chantarated J. 1979. Effect of weeding density on gall midge infestation and rice yields in Northen Thailand. Int. Rice Res. Notes 4: 19
Yoshimura S, Umehera Y, Kurata N, Nagamura Y, Sasaki T, Minobe Y, Iwata N. 1996. Identification of a YAC clone carrying the Xa-1 allele, a bacterial blight resistance gene in rice. Theor. Appl. Genet. 93: 117–122
Yoshimura S, Yoshimura A, Iwata N, Mc Couch SR, Abenes ML, Baraoidan MR, Mew TW, Nelson RJ. 1995. Tagging and combining bacterial blight resistance genes in rice using RAPD and RFLP markers. Mol. Breed. 1: 375–387
Zhang G, Angele ER, Abenes MLP, Khush GS, Huang N. 1996. RAPD and RFLP mapping for the bacterial blight resistance gene xa-13 in rice. Theor. Appl. Genet. 93: 65–70
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Guvvala, L.D., Koradi, P., Shenoy, V. et al. Making an Indian traditional rice variety Mahsuri, bacterial blight resistant using marker-assisted selection. J. Crop Sci. Biotechnol. 16, 111–121 (2013). https://doi.org/10.1007/s12892-013-0009-6
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DOI: https://doi.org/10.1007/s12892-013-0009-6