Abstract
Cancerous exosomes that carry multiple biomarkers are attractive targets for the early diagnosis and therapy of cancer. As one of the powerful molecular recognition tools, aptamers with excellent binding affinity and specificity toward biomarkers have been exploited to construct various aptamer-based biosensors (aptasensors) for exosome detection. Here, we review recent advances in aptasensors for the detection of cancerous exosomes. We first discuss the importance and potential of cancerous exosomes in cancer diagnosis and then summarize some conventional aptasensors from the perspective of biomarker recognition and signal collection strategies. Finally, we comment on the outlook for aptasensor research and new directions for cancerous exosome detection.
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References
Leffall LD Jr (1974) Early diagnosis of colorectal cancer. CA Cancer J Clin 24:152–159
Ranjan R, Esimbekova EN, Kratasyuk VA (2017) Rapid biosensing tools for cancer biomarkers. Biosens Bioelectron 87:918–930
Majumdar D, Peng XH, Shin DM (2010) The medicinal chemistry of theragnostics, multimodality imaging and applications of nanotechnology in cancer. Curr Top Med Chem 10:1211–1226
Novak D, Utikal J (2021) New biomarkers in cancers. Cancers 13:708
Nassar FJ, Nasr R, Talhouk R (2017) MicroRNAs as biomarkers for early breast cancer diagnosis, prognosis and therapy prediction. Pharmacol Ther 172:34–49
Schirripa M, Lenz HJ (2016) Biomarker in colorectal cancer. Cancer J 22:156–164
Saxena S, Sankhla B, Sundaragiri KS, Bhargava A (2017) A review of salivary biomarker: a tool for early oral cancer diagnosis. Adv Biomed Res 6:90
Kumar S, Mohan A, Guleria R (2006) Biomarkers in cancer screening, research and detection: present and future: a review. Biomarkers 11:385–405
Adhami M, Haghdoost AA, Sadeghi B, Malekpour Afshar R (2018) Candidate miRNAs in human breast cancer biomarkers: a systematic review. Breast Cancer 25:198–205
Azmi AS, Bao B, Sarkar FH (2013) Exosomes in cancer development, metastasis, and drug resistance: a comprehensive review. Cancer Metastasis Rev 32:623–642
Gurunathan S, Kang M-H, Jeyaraj M, Qasim M, Kim J-H (2019) Review of the isolation, characterization, biological function, and multifarious therapeutic approaches of exosomes. Cell 8:307
Li X, Corbett AL, Taatizadeh E, Tasnim N, Little JP, Garnis C, Daugaard M, Guns E, Hoorfar M, Li ITS (2019) Challenges and opportunities in exosome research–perspectives from biology, engineering, and cancer therapy. APL Bioeng 3:011503
Soung YH, Ford S, Zhang V, Chung J (2017) Exosomes in cancer diagnostics. Cancers 9:8
Li W, Li C, Zhou T, Liu X, Liu X, Li X, Chen D (2017) Role of exosomal proteins in cancer diagnosis. Mol Cancer 16:145
Zhang L, Gu C, Wen J, Liu G, Liu H, Li L (2021) Recent advances in nanomaterial-based biosensors for the detection of exosomes. Anal Bioanal Chem 413:83–102
Shao B, Xiao Z (2020) Recent achievements in exosomal biomarkers detection by nanomaterials-based optical biosensors—a review. Anal Chim Acta 1114:74–84
Xu L, Shoaie N, Jahanpeyma F, Zhao J, Azimzadeh M, Al-Jamal KT (2020) Optical, electrochemical and electrical (nano)biosensors for detection of exosomes: a comprehensive overview. Biosens Bioelectron 161:112222
Lorencova L, Bertok T, Bertokova A, Gajdosova V, Hroncekova S, Vikartovska A, Kasak P, Tkac J (2020) Exosomes as a source of cancer biomarkers: advances in electrochemical biosensing of exosomes. ChemElectroChem 7:1956–1973
Ellington AD, Szostak JW (1990) In vitro selection of RNA molecules that bind specific ligands. Nature 346:818–822
Tuerk C, Gold L (1990) Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science 249:505–510
Qu H, Csordas AT, Wang J, Oh SS, Eisenstein MS, Soh HT (2016) Rapid and label-free strategy to isolate aptamers for metal ions. ACS Nano 10:7558–7565
Nozari A, Berezovski MV (2017) Aptamers for CD antigens: from cell profiling to activity modulation. Mol Ther Nucleic Acids 6:29–44
Shangguan D, Li Y, Tang Z, Cao ZC, Chen HW, Mallikaratchy P, Sefah K, Yang CJ, Tan W (2006) Aptamers evolved from live cells as effective molecular probes for cancer study. Proc Natl Acad Sci U S A 103:11838–11843
Pang X, Cui C, Wan S, Jiang Y, Zhang L, Xia L, Li L, Li X, Tan W (2018) Bioapplications of cell-SELEX-generated aptamers in cancer diagnostics, therapeutics, theranostics and biomarker discovery: a comprehensive review. Cancers 10:47
Mercier MC, Dontenwill M, Choulier L (2017) Selection of nucleic acid aptamers targeting tumor cell-surface protein biomarkers. Cancers 9:69
Fafińska J, Czech A, Sitz T, Ignatova Z, Hahn U (2018) DNA aptamers for the malignant transformation marker CD24. Nucleic Acid Ther 28:326–334
Wang Q, Zou L, Yang X, Liu X, Nie W, Zheng Y, Cheng Q, Wang K (2019) Direct quantification of cancerous exosomes via surface plasmon resonance with dual gold nanoparticle-assisted signal amplification. Biosens Bioelectron 135:129–136
Li H, Liu J, Xiao X, Sun S, Zhang H, Zhang Y, Zhou W, Zhang B, Roy M, Liu H, Ye M, Wang Z, Liu-Smith F, Liu J (2019) A novel aptamer LL4A specifically targets vemurafenib-resistant melanoma through binding to the CD63 protein. Mol Ther Nucleic Acids 18:727–738
Song Z, Mao J, Barrero RA, Wang P, Zhang F, Wang T (2020) Development of a CD63 aptamer for efficient cancer immunochemistry and immunoaffinity-based exosome isolation. Molecules 25:5585
Gao M-L, Yin B-C, Ye B-C (2019) Construction of a DNA-AuNP-based satellite network for exosome analysis. Analyst 144:5996–6003
Lai W-Y, Huang B-T, Wang J-W, Lin P-Y, Yang P-C (2016) A novel PD-L1-targeting antagonistic DNA aptamer with antitumor effects. Mol Ther Nucleic Acids 5:e397
Zavyalova E, Turashev A, Novoseltseva A, Legatova V, Antipova O, Savchenko E, Balk S, Golovin A, Pavlova G, Kopylov A (2020) Pyrene-modified DNA aptamers with high affinity to wild-type EGFR and EGFRvIII. Nucleic Acid Ther 30:175–187
Wang D-L, Song Y-L, Zhu Z, Li X-L, Zou Y, Yang H-T, Wang J-J, Yao P-S, Pan R-J, Yang CJ, Kang D-Z (2014) Selection of DNA aptamers against epidermal growth factor receptor with high affinity and specificity. Biochem Biophys Res Commun 453:681–685
Mahlknecht G, Maron R, Mancini M, Schechter B, Sela M, Yarden Y (2013) Aptamer to ErbB-2/HER2 enhances degradation of the target and inhibits tumorigenic growth. Proc Natl Acad Sci U S A 110:8170–8175
Zhu G, Zhang H, Jacobson O, Wang Z, Chen H, Yang X, Niu G, Chen X (2017) Combinatorial screening of DNA aptamers for molecular imaging of HER2 in cancer. Bioconjug Chem 28:1068–1075
Shigdar S, Lin J, Yu Y, Pastuovic M, Wei M, Duan W (2011) RNA aptamer against a cancer stem cell marker epithelial cell adhesion molecule. Cancer Sci 102:991–998
Lupold SE, Hicke BJ, Lin Y, Coffey DS (2002) Identification and characterization of nuclease-stabilized RNA molecules that bind human prostate cancer cells via the prostate-specific membrane antigen. Cancer Res 62:4029–4033
Lee YJ, Han SR, Kim NY, Lee SH, Jeong JS, Lee SW (2012) An RNA aptamer that binds carcinoembryonic antigen inhibits hepatic metastasis of colon cancer cells in mice. Gastroenterology 143:155–65.e8
Nabavinia MS, Gholoobi A, Charbgoo F, Nabavinia M, Ramezani M, Abnous K (2017) Anti-MUC1 aptamer: a potential opportunity for cancer treatment. Med Res Rev 37:1518–1539
Dong L, Tan Q, Ye W, Liu D, Chen H, Hu H, Wen D, Liu Y, Cao Y, Kang J, Fan J, Guo W, Wu W (2015) Screening and identifying a novel ssDNA aptamer against alpha-fetoprotein using CE-SELEX. Sci Rep 5:15552
Gobbo J, Marcion G, Cordonnier M, Dias AMM, Pernet N, Hammann A, Richaud S, Mjahed H, Isambert N, Clausse V, Rébé C, Bertaut A, Goussot V, Lirussi F, Ghiringhelli F, de Thonel A, Fumoleau P, Seigneuric R, Garrido C (2016) Restoring anticancer immune response by targeting tumor-derived exosomes with a HSP70 peptide aptamer. J Natl Cancer Inst. 108
Fang X, Tan W (2010) Aptamers generated from cell-SELEX for molecular medicine: a chemical biology approach. Acc Chem Res 43:48–57
Tan W, Donovan MJ, Jiang J (2013) Aptamers from cell-based selection for bioanalytical applications. Chem Rev 113:2842–2862
Li B, Pan W, Liu C, Guo J, Shen J, Feng J, Luo T, Situ B, Zhang Y, An T, Xu C, Zheng W, Zheng L (2020) Homogenous magneto-fluorescent nanosensor for tumor-derived exosome isolation and analysis. ACS Sens 5:2052–2060
Zhao X, Luo C, Mei Q, Zhang H, Zhang W, Su D, Fu W, Luo Y (2020) Aptamer-cholesterol-mediated proximity ligation assay for accurate identification of exosomes. Anal Chem 92:5411–5418
Yang L, Yin X, An B, Li F (2021) Precise capture and direct quantification of tumor exosomes via a highly efficient dual-aptamer recognition-assisted ratiometric immobilization-free electrochemical strategy. Anal Chem 93:1709–1716
Dong H, Chen H, Jiang J, Zhang H, Cai C, Shen Q (2018) Highly sensitive electrochemical detection of tumor exosomes based on aptamer recognition-induced multi-DNA release and cyclic enzymatic amplification. Anal Chem 90:4507–4513
He F, Liu H, Guo X, Yin B-C, Ye B-C (2017) Direct exosome quantification via bivalent-cholesterol-labeled DNA anchor for signal amplification. Anal Chem 89:12968–12975
Wang Y-M, Liu J-W, Adkins GB, Shen W, Trinh MP, Duan L-Y, Jiang J-H, Zhong W (2017) Enhancement of the intrinsic peroxidase-like activity of graphitic carbon nitride nanosheets by ssDNAs and its application for detection of exosomes. Anal Chem 89:12327–12333
Huang R, He L, Li S, Liu H, Jin L, Chen Z, Zhao Y, Li Z, Deng Y, He N (2020) A simple fluorescence aptasensor for gastric cancer exosome detection based on branched rolling circle amplification. Nanoscale 12:2445–2451
Huang L, Wang D-B, Singh N, Yang F, Gu N, Zhang X-E (2018) A dual-signal amplification platform for sensitive fluorescence biosensing of leukemia-derived exosomes. Nanoscale 10:20289–20295
Zhang J, Shi J, Liu W, Zhang K, Zhao H, Zhang H, Zhang Z (2018) A simple, specific and “on-off” type MUC1 fluorescence aptasensor based on exosomes for detection of breast cancer. Sens Actuators B Chem 276:552–559
Shi L, Ba L, Xiong Y, Peng G (2019) A hybridization chain reaction based assay for fluorometric determination of exosomes using magnetic nanoparticles and both aptamers and antibody as recognition elements. Mikrochim Acta 186:796
Wang H, Chen H, Huang Z, Li T, Deng A, Kong J (2018) DNase I enzyme-aided fluorescence signal amplification based on graphene oxide-DNA aptamer interactions for colorectal cancer exosome detection. Talanta 184:219–226
Zhang Z, Tang C, Zhao L, Xu L, Zhou W, Dong Z, Yang Y, Xie Q, Fang X (2019) Aptamer-based fluorescence polarization assay for separation-free exosome quantification. Nanoscale 11:10106–10113
Zhang Q, Wang F, Zhang H, Zhang Y, Liu M, Liu Y (2018) Universal Ti3C2 MXenes based self-standard ratiometric fluorescence resonance energy transfer platform for highly sensitive detection of exosomes. Anal Chem 90:12737–12744
Jin D, Yang F, Zhang Y, Liu L, Zhou Y, Wang F, Zhang G-J (2018) ExoAPP: exosome-oriented, aptamer nanoprobe-enabled surface proteins profiling and detection. Anal Chem 90:14402–14411
Yin X, Hou T, Huang B, Yang L, Li F (2019) Aptamer recognition-trigged label-free homogeneous electrochemical strategy for an ultrasensitive cancer-derived exosome assay. Chem Commun (Camb) 55:13705–13708
Bagheri Hashkavayi A, Cha BS, Lee ES, Kim S, Park KS (2020) Advances in exosome analysis methods with an emphasis on electrochemistry. Anal Chem 92:12733–12740
Zhou Q, Rahimian A, Son K, Shin D-S, Patel T, Revzin A (2016) Development of an aptasensor for electrochemical detection of exosomes. Methods 97:88–93
Wang S, Zhang L, Wan S, Cansiz S, Cui C, Liu Y, Cai R, Hong C, Teng IT, Shi M, Wu Y, Dong Y, Tan W (2017) Aptasensor with expanded nucleotide using DNA nanotetrahedra for electrochemical detection of cancerous exosomes. ACS Nano 11:3943–3949
An Y, Jin T, Zhu Y, Zhang F, He P (2019) An ultrasensitive electrochemical aptasensor for the determination of tumor exosomes based on click chemistry. Biosens Bioelectron 142:111503
Huang R, He L, Xia Y, Xu H, Liu C, Xie H, Wang S, Peng L, Liu Y, Liu Y, He N, Li Z (2019) A sensitive aptasensor based on a hemin/G-quadruplex-assisted signal amplification strategy for electrochemical detection of gastric cancer exosomes. Small 15:e1900735
Zhao L, Sun R, He P, Zhang X (2019) Ultrasensitive detection of exosomes by target-triggered three-dimensional DNA walking machine and exonuclease III-assisted electrochemical ratiometric biosensing. Anal Chem 91:14773–14779
Hassan EM, DeRosa MC (2020) Recent advances in cancer early detection and diagnosis: role of nucleic acid based aptasensors. TrAC Trends Anal Chem 124:115806
Xia Y, Liu M, Wang L, Yan A, He W, Chen M, Lan J, Xu J, Guan L, Chen J (2017) A visible and colorimetric aptasensor based on DNA-capped single-walled carbon nanotubes for detection of exosomes. Biosens Bioelectron 92:8–15
Zhang Y, Wang D, Yue S, Lu Y, Yang C, Fang J, Xu Z (2019) Sensitive multicolor visual detection of exosomes via dual signal amplification strategy of enzyme-catalyzed metallization of Au nanorods and hybridization chain reaction. ACS Sens 4:3210–3218
Jiang Y, Shi M, Liu Y, Wan S, Cui C, Zhang L, Tan W (2017) Aptamer/AuNP biosensor for colorimetric profiling of exosomal proteins. Angew Chem Int Ed 56:11916–11920
Liao G, Liu X, Yang X, Wang Q, Geng X, Zou L, Liu Y, Li S, Zheng Y, Wang K (2020) Surface plasmon resonance assay for exosomes based on aptamer recognition and polydopamine-functionalized gold nanoparticles for signal amplification. Mikrochim Acta 187:251
Zhang X, Liu C, Pei Y, Song W, Zhang S (2019) Preparation of a novel Raman probe and its application in the detection of circulating tumor cells and exosomes. ACS Appl Mater Interfaces 11:28671–28680
Qiao B, Guo Q, Jiang J, Qi Y, Zhang H, He B, Cai C, Shen J (2019) An electrochemiluminescent aptasensor for amplified detection of exosomes from breast tumor cells (MCF-7 cells) based on G-quadruplex/hemin DNAzymes. Analyst 144:3668–3675
Wang Z, Zong S, Wang Y, Li N, Li L, Lu J, Wang Z, Chen B, Cui Y (2018) Screening and multiple detection of cancer exosomes using an SERS-based method. Nanoscale 10:9053–9062
Zhang H, Wang Z, Wang F, Zhang Y, Wang H, Liu Y (2020) In situ formation of gold nanoparticles decorated Ti3C2 MXenes nanoprobe for highly sensitive electrogenerated chemiluminescence detection of exosomes and their surface proteins. Anal Chem 92:5546–5553
Huang M, Yang J, Wang T, Song J, Xia J, Wu L, Wang W, Wu Q, Zhu Z, Song Y, Yang C (2020) Homogeneous, low-volume, efficient, and sensitive quantitation of circulating exosomal PD-L1 for cancer diagnosis and immunotherapy response prediction. Angew Chem Int Ed 59:4800–4805
Li P, Yu X, Han W, Kong Y, Bao W, Zhang J, Zhang W, Gu Y (2019) Ultrasensitive and reversible nanoplatform of urinary exosomes for prostate cancer diagnosis. ACS Sens 4:1433–1441
Liu C, Zhao J, Tian F, Cai L, Zhang W, Feng Q, Chang J, Wan F, Yang Y, Dai B, Cong Y, Ding B, Sun J, Tan W (2019) Low-cost thermophoretic profiling of extracellular-vesicle surface proteins for the early detection and classification of cancers. Nat Biomed Eng 3:183–193
Webber J, Stone TC, Katilius E, Smith BC, Gordon B, Mason MD, Tabi Z, Brewis IA, Clayton A (2014) Proteomics analysis of cancer exosomes using a novel modified aptamer-based array (SOMAscan™) platform. Mol Cell Proteomics 13:1050–1064
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Li, J., Xie, S., Qu, F., Tan, W. (2022). Aptasensors for Cancerous Exosome Detection. In: Federico, M., Ridolfi, B. (eds) Extracellular Vesicles in Diagnosis and Therapy. Methods in Molecular Biology, vol 2504. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-2341-1_1
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DOI: https://doi.org/10.1007/978-1-0716-2341-1_1
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