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The generality of scientific models: a measure theoretic approach

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Abstract

Scientific models are often said to be more or less general depending on how many cases they cover. In this paper we argue that the cardinality of cases is insufficient as a metric of generality, and we present a novel account based on measure theory. This account overcomes several problems with the cardinality approach, and additionally provides some insight into the nature of assessments of generality. Specifically, measure theory affords a natural and quantitative way of describing local spaces of possibility. The generality of models can be understood as the measure of possibilities to which the models apply. In order to illustrate our view, we consider the example of structural genomics, the ongoing project of building three-dimensional models of biological macromolecules like proteins. Using measure theory, we interpret the practice of homology modeling, where such models are understood to apply widely but imperfectly to the space of possible proteins.

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Notes

  1. See for example Hitchcock and Woodward (2003) and Weslake (2010).

  2. Measure theory is identified by Michael Strevens as the appropriate formalism for capturing ‘abstractness,’ a property related to generality (Strevens 2004, p. 170). Our proposal is largely inspired by this suggestion.

  3. For a more precise treatment of precision, and a discussion of the potential tradeoff between precision and generality, see Weisberg (2004).

  4. In some contexts 50 % sequence similarity is much more than is necessary for proteins to exhibit structural similarities. Under the influence of natural selection, evolved proteins often differ by 75 % or more of their sequence and retain structural similarities (Rost 1999).

  5. For more details on how novel leverage is calculated, see the Supplementary Information to Liu et al. (2007), available online: http://www.nature.com/nbt/journal/v25/n8/extref/nbt0807-849-S1.

  6. http://blast.ncbi.nlm.nih.gov/Blast.cgi.

  7. http://www.uniprot.org/.

References

  • Cartwright, N. (1999). The dappled world: A study of the boundaries of science (Vol. 2). Cambridge: Cambridge University Press.

    Book  Google Scholar 

  • Cavasotto, C., & Phatak, S. (2009). Homology modeling in drug discovery: Current trends and applications. Drug Discovery Today, 14(13), 676–683.

    Article  Google Scholar 

  • Chandonia, J. M., & Brenner, S. (2006). The impact of structural genomics: Expectations and outcomes. Science, 311(5759), 347–351.

    Article  Google Scholar 

  • Consortium, U. (2011). Ongoing and future developments at the universal protein resource. Nucleic Acids Research, 39(supplement 1), D214–D219.

    Article  Google Scholar 

  • Dessailly, B. H., Nair, R., Jaroszewski, L., Fajardo, J. E., Kouranov, A., Lee, D., et al. (2009). Psi-2: Structural genomics to cover protein domain family space. Structure, 17, 869–881.

    Article  Google Scholar 

  • Fine, K. (1972). In so many possible worlds. Notre Dame Journal of Formal Logic, 13, 516–520.

    Article  Google Scholar 

  • Friedman, M. (1974). Explanation and scientific understanding. The Journal of Philosophy, 71(1), 5–19.

    Article  Google Scholar 

  • Giere, R. N. (1988). Explaining science: A cognitive approach. Chicago: University of Chicago Press.

    Book  Google Scholar 

  • Giere, R. N. (1999). Science Without Laws of Nature, Chap 5. Chicago: University of Chicago Press.

    Google Scholar 

  • Hempel, C. (1942). The function of general laws in history. Journal of Philosophy, 39, 35–48.

    Article  Google Scholar 

  • Hillisch, A., Pineda, L., & Hilgenfeld, R. (2004). Utility of homology models in the drug discovery process. Drug Discovery Today, 9(15), 659–669.

    Article  Google Scholar 

  • Hitchcock, C., & Woodward, J. (2003). Explanatory generalizations, part ii: Plumbing explanatory depth. Noûs, 37(2), 181–199.

    Article  Google Scholar 

  • Kitcher, P. (1989). Explanatory unification and the causal structure of the world. In P. Kitcher & W. Salmon (Eds.), Scientific explanation (pp. 410–505). Minneapolis, Minnesota: University of Minnesota Press.

    Google Scholar 

  • Ladunga, I. (1992). Phylogenetic continuum indicates galaxies in the protein universe: Preliminary results on the natural group structure of proteins. Journal of Molecular Evolution, 4, 358–375.

    Article  Google Scholar 

  • Lange, M. (2002). Who’s afraid of ceteris-paribus laws? Or: How I learned to stop worrying and love them. Erkenntnis, 57(3), 407–423.

    Article  Google Scholar 

  • Lange, M., & Lundberg, P. (2005). Ecological laws: What would they be and why would they matter? Oikos, 110(2), 394–403.

    Article  Google Scholar 

  • Levins, R. (1966). The strategy of model building in population biology. American Scientist, 54(4), 421–431.

    Google Scholar 

  • Liu, J., Montelione, G., & Rost, B. (2007). Novel leverage of structural genomics. Nature Biotechnology, 25(8), 849–851.

    Article  Google Scholar 

  • Mardis, E. (2011). A decade’s perspective on dna sequencing technology. Nature, 470(7333), 198–203.

    Article  Google Scholar 

  • Matthewson, J., & Weisberg, M. (2009). The structure of tradeoffs in model building. Synthese, 170, 169–190.

    Article  Google Scholar 

  • Mitchell, S. (1997). Pragmatic laws. Philosophy of Science, 64, S468–S479.

    Article  Google Scholar 

  • Mitchell, S. (2000). Dimensions of scientific law. Philosophy of Science, 67(2), 242–265.

    Article  Google Scholar 

  • Morgan, M., & Morrison, M. (Eds.). (1999). Models as mediators: Perspectives on natural and social science (Vol. 52). Cambridge: Cambridge University Press.

    Google Scholar 

  • Odenbaugh, J. (2002). Complex systems, trade-offs, and theoretical population biology: Richard levin’s ”strategy of model building in population biology” revisited. Philosophy of Science, 70(5), 1496–1507.

    Article  Google Scholar 

  • Orry, A., & Abagyan, R. (Eds.). (2012). Homology modeling: Methods and protocols. New York: Humana Press.

    Google Scholar 

  • Orzack, S. (2005). What, if anything, is ’the strategy of model building in population bioogy’? a comment on levins (1996) and oenbaugh (2003). Philosophy of Science, 72, 479–485.

    Article  Google Scholar 

  • Orzack, S., & Sober, E. (1993). A critical assessment of levins’s the strategy of model building in population biology (1966). Quarterly Review of Biology, 68(4), 533–546.

    Article  Google Scholar 

  • Potochnik, A. (2007). Optimality modeling and explanatory generality. Philosophy of Science 74(5), 680–691.

  • Rost, B. (1999). Twilight zone of protein sequence alignments. Protein Engineering, 12(2), 85–94.

    Article  Google Scholar 

  • Sober, E. (1997). Two outbreaks of lawlessness in recent philosophy of biology. Philosophy of Science, 64, S458–S467.

    Article  Google Scholar 

  • Strevens, M. (2004). The causal and unification approaches to explanation unified–causally. Noûs, 38, 154–176.

    Article  Google Scholar 

  • Strevens, M. (2008). Depth: An account of scientific explanation. Cambridge, MA: Harvard University Press.

    Google Scholar 

  • van Fraassen, B. (1989). Laws and symmetry. Oxford: Oxford University Press.

    Book  Google Scholar 

  • Weisberg, M. (2004). Qualitative theory and chemical explanation. Philosophy of Science, 71(5), 1071–1081.

    Article  Google Scholar 

  • Weisberg, M. (2006). Forty years of ’the strategy’ : Levins on model building and idealization. Biology and Philosophy, 21(5), 623–645.

    Article  Google Scholar 

  • Weslake, B. (2010). Explanatory depth. Philosophy of Science, 77(2), 273–294.

    Article  Google Scholar 

  • Woodward, J. (2003). Making things happen. New York: Oxford University Press.

    Google Scholar 

  • Woodward, J. (2006). Sensitive and insensitive causation. The Philosophical Review, 115, 1–50.

    Article  Google Scholar 

  • Woodward, J. (2010). Causation in biology: Stability, specificity, and the choice of levels of explanation. Biology & Philosophy, 25(3), 287–318.

    Article  Google Scholar 

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Acknowledgments

We would like to thank audiences at Duke University, the Canadian Society for the History and Philosophy of Science 2014 annual meeting, and at the IHPST Toronto, for their invaluable feedback on earlier versions of this paper. We would also like to thank Denis Walsh, Philippe Huneman, Burkhard Rost, and our reviewers, for helpful comments.

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Correspondence to Cory Travers Lewis.

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Lewis, C.T., Belanger, C. The generality of scientific models: a measure theoretic approach. Synthese 192, 269–285 (2015). https://doi.org/10.1007/s11229-014-0567-2

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