Abstract
Objectives
To develop a site-specific integration strategy for CAR-T engineering by using a non-viral vector dependent on adeno-associated viral (AAV) genome, which tends to be integrated into AAVS1 site with the help of its Rep proteins.
Results
AAV-dependent vectors were produced in Sf9 cells. Structural analyses revealed the vector as covalently close-ended, linear duplex molecules, which was termed “CELiD” DNA. A plasmid CMV-Rep was constructed to express the integrases Rep78 and Rep68. Jurkat cells were co-electroporated with “CELiD” DNA and plasmid CMV-Rep in order to specifically integrate CAR gene into AAVS1 site. We examined 71 stably transfected Jurkat clones by nested PCR, sequencing and southern blotting, of which 30 clones bore CAR gene within AAVS1 site. The site-specific integration efficiency was nearly 42.2 %.
Conclusions
The AAV-dependent vector preferentially integrated CAR into AAVS1 site, which could be further used in human T cell modification and enhance the security of CAR-T therapy.
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References
Donsante A, Vogler C, Muzyczka N et al (2001) Observed incidence of tumorigenesis in long-term rodent studies of rAAV vectors. Gene Ther 8:1343–1346
Eshhar Z (2010) Adoptive cancer immunotherapy using genetically engineered designer T-cells: first steps into the clinic. Curr Opin Mol Ther 12:55–63
Feng D, Chen J, Yue Y, Zhu H, Xue J, Jia WW (2006) A 16 bp Rep binding element is sufficient for mediating Rep-dependent integration into AAVS1. J Mol Biol 358:38–45
Krug C, Wiesinger M, Abken H et al (2014) A GMP-compliant protocol to expand and transfect cancer patient T cells with mRNA encoding a tumor-specific chimeric antigen receptor. Cancer Immunol Immunother 63:999–1008
Lamers CH, Willemsen R, van Elzakker P et al (2011) Immune responses to transgene and retroviral vector in patients treated with ex vivo-engineered T cells. Blood 117:72–82
Li L, Dimitriadis EK, Yang Y et al (2013) Production and characterization of novel recombinant adeno-associated virus replicative-form genomes: an eukaryotic source of DNA for gene transfer. PLoS One 8:e69879
Lombardo A, Cesana D, Genovese P, Di Stefano B, Provasi E, Colombo DF et al (2011) Site-specific integration and tailoring of cassette design for sustainable gene transfer. Nat Methods 8:861–869
Porter DL, Levine BL, Kalos M, Bagg A, June CH (2011) Chimeric antigen receptor-modified T cells in chronic lymphoid leukemia. N Engl J Med 365:725–733
Ramachandra CJ, Shahbazi M, Kwang TW et al (2011) Efficient recombinase-mediated cassette exchange at the AAVS1 locus in human embryonic stem cells using baculoviral vectors. Nucleic Acids Res 39:e107
Sadelain M, Papapetrou EP, Bushman FD (2011) Safe harbours for the integration of new DNA in the human genome. Nat Rev Cancer 12:51–58
Suerth JD, Schambach A, Baum C (2012) Genetic modification of lymphocytes by retrovirus-based vectors. Curr Opin Immunol 24:598–608
Turtle CJ (2014) Chimeric antigen receptor modified T cell therapy for B cell malignancies. Int J Hematol 99:132–140
Wang LN, Wang Y, Lu Y et al (2014) Pristimerin enhances recombinant adeno-associated virus vector-mediated transgene expression in human cell lines in vitro and murine hepatocytes in vivo. J Integr Med 12:20–34
Zhang C, Cortez NG, Berns KI (2007) Characterization of a bipartite recombinant adeno-associated vira vector for site-specific integration. Hum Gene Ther 18:787–797
Zhang YH, Wang Y, Yusufali AH et al (2014) Cytotoxic genes from traditional Chinese medicine inhibit tumor growth both in vitro and in vivo. J Integr Med 12:483–494
Acknowledgments
This work was supported by grants from the National Natural Science Foundation of China (No. 81371670), the Natural Science Foundation of Jiangsu Province (Grant No. BK20140381) and the Science and Technology Program of Suzhou (Grant No. ZXY201432).
Supporting information
Supplementary Methods: Cells and culture conditions, construction of CD19-specific CARs and plasmids, western blotting.
Supplementary Material: Sequences of AAVS1 probe and NeoR probe for Southern blotting.
Supplementary Fig. 1—CAR-T cells activation assay.
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Zhang, Y., Liu, X., Zhang, J. et al. Site-specific integration of CAR gene into Jurkat T cells with a linear close-ended AAV-based DNA vector for CAR-T engineering. Biotechnol Lett 38, 1423–1431 (2016). https://doi.org/10.1007/s10529-016-2139-7
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DOI: https://doi.org/10.1007/s10529-016-2139-7