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Detection of Vibrio cholerae and Vibrio vulnificus by duplex PCR specific to the groEL gene

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  • Food Science and Technology
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Abstract

Vibrio cholerae and V. vulnificus are of major concern due to their effect on public health throughout the world. It is therefore imperative to identify a gene and method that are suitable for the accurate species-specific detection of these two species. A duplex polymerase chain reaction (PCR) assay was developed using two sets of primers targeting the groEL gene for the accurate simultaneous detection of V. cholerae and V. vulnificus. The nucleotide sequence of the groEL gene was compared with the sequences of other Vibrio and non-Vibrio species. The specificity of two primer sets for duplex PCR was checked using 24 Vibrio and 8 non-Vibrio species. The primer sets were found to be specific for these two species and could detect both of the target bacterial species without any ambiguity, even when comparing closely related species. For both species, the detection limit was 100 pg of purified genomic DNA. The duplex PCR showed high specificity and sensitivity for each species and was sufficient for the detection of V. cholerae and V. vulnificus from artificially infected shellfish tissue, flounder, and even inoculated seawater. This method is simple and cost-effective, and can be utilized for the simultaneous detection of both species, thus representing an effective tool for both epidemiologist and ecologist.

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References

  1. Hsieh JL, Fries JS, Noble RT (2008) Dynamics and predictive modeling of Vibrio spp. in the Neuse River Estuary, North Carolina, USA. Environ Microbiol 10:57–64

    PubMed  Google Scholar 

  2. Sack DA, Sack RB, Nair GB, Siddique AK (2004) Cholera. Lancet 363:223–233

    Article  PubMed  CAS  Google Scholar 

  3. Oliver JD (2005) Wound infections caused by Vibrio vulnificus and other marine bacteria. Epidemiol Infect 133:383–391

    Article  PubMed  CAS  Google Scholar 

  4. Jones MK, Oliver JD (2009) Vibrio vulnificus: disease and pathogenesis. Infect Immun 77:1723–1733

    Article  PubMed  CAS  Google Scholar 

  5. Oliver JD, Kaper JB (2001) Vibrio species. In: Doyle MP, Beuchat LR, Montville TJ (eds) Food microbiology: fundamentals and frontiers. ASM Press, Washington, DC

    Google Scholar 

  6. Ottaviani D, Leoni F, Rocchegiani E, Santarelli S, Masini L, Trani VD, Canonico C, Pianetti A, Tega L, Carraturo A (2009) Prevalence and virulence properties of non-O1 and non-O139 Vibrio cholerae strains from seafood and clinical samples collected in Italy. Int J Food Microbiol 132:47–53

    Article  PubMed  CAS  Google Scholar 

  7. Lalitha P, Siti Suraiya MN, Lim KL, Lee SY, Nur Haslindawaty AR, Chan YY, Ismail A, Zainuddin ZF, Ravichandran M (2008) Analysis of lolB gene sequence and its use in the development of a PCR assay for the detection of Vibrio cholerae. J Microbiol Methods 75:142–144

    Article  PubMed  CAS  Google Scholar 

  8. Han F, Ge B (2010) Multiplex PCR assay for simultaneous detection and characterization of Vibrio vulnificus strains. Lett Appl Microbiol 51:234–240

    PubMed  CAS  Google Scholar 

  9. Neogi SB, Chowdhury N, Asakura M, Hinenoya A, Haldar S, Saidi SM, Kogure K, Lara RJ, Yamasaki S (2010) A highly sensitive and specific multiplex PCR assay for simultaneous detection of Vibrio cholerae, Vibrio parahaemolyticus and Vibrio vulnificus. Lett Appl Microbiol 51:293–300

    Article  PubMed  CAS  Google Scholar 

  10. Teh CSJ, Chua KH, Thong KL (2010) Simultaneous differential detection of human pathogenic and nonpathogenic Vibrio species using multiplex PCR based on gyrB and pntA genes. J Appl Microbiol 108:1940–1945

    PubMed  CAS  Google Scholar 

  11. Faruque SM, Asadulghani, Saha MN, Alim AR, Albert MJ, Islam KM, Mekalanos JJ (1998) Analysis of clinical and environmental strains of nontoxigenic Vibrio cholerae for susceptibility to CTXФ: molecular basis for origination of new strains with epidemic potential. Infect Immun 66:5819–5825

  12. Chizhikov V, Rasooly A, Chumakov K, Levy DD (2001) Microarray analysis of microbial virulence factors. Appl Environ Microbiol 67:3258–3263

    Article  PubMed  CAS  Google Scholar 

  13. Izumiya H, Matsumoto K, Yahiro S, Lee J, Morita M, Yamamoto S, Arakawa E, Ohnishi M (2011) Multiplex PCR assay for identification of three major pathogenic Vibrio spp., Vibrio cholera, Vibrio parahaemolyticus, and Vibrio vulnificus. Mol Cell Probes 25:174–176

    Article  PubMed  CAS  Google Scholar 

  14. Jeyasekaran G, Raj KT, Shakila RJ, Thangarani AJ, Sukumar D (2011) Multiplex polymerase chain reaction-based assay for the specific detection of toxin-producing Vibrio cholerae in fish and fishery products. Appl Microbiol Biotechnol 90:1111–1118

    Article  PubMed  CAS  Google Scholar 

  15. Nishibuchi M (2006) The biology of vibrios. In: Thompson FL et al (eds) Molecular identification. ASM Press, Washington, DC, pp 44–64

  16. Yushan H, Lei L, Weijia L, Xiaoguang C (2010) Sequence analysis of the groEL gene and its potential application in identification of pathogenic bacteria. Afr J Microbiol 4:1733–1741

    Google Scholar 

  17. Hossain MT, Kim EY, Kim YR, Kim DG, Kong IS (2011) Application of groEL gene for the species-specific detection of Vibrio parahaemolyticus by PCR. Lett Appl Microbiol 54:67–72

    Article  PubMed  Google Scholar 

  18. Kim YR, Kim EY, Kim DG, Kim YO, Hossain MT, Kong IS (2012) DNA array with the groESL intergenic sequence to detect Vibrio parahaemolyticus and Vibrio vulnificus. Anal Biochem 424:32–34

    Article  PubMed  CAS  Google Scholar 

  19. Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K (1998) Current protocols in molecular biology. Wiley, New York

    Google Scholar 

  20. Kim JS, Lee GG, Kim J, Kwon JY, Kwon ST (2008) The development of rapid real-time PCR detection system for Vibrio parahaemolyticus in raw oyster. Lett Appl Microbiol 46:649–654

    Article  PubMed  CAS  Google Scholar 

  21. Nhung PH, Ohkusu K, Miyasaka J, Sun XS, Ezaki T (2007) Rapid and specific identification of 5 human pathogenic Vibrio species by multiplex polymerase chain reaction targeted to dnaJ gene. Diagn Microbiol Infect Dis 59:271–275

    Article  PubMed  CAS  Google Scholar 

  22. Tarr CL, Patel JS, Phur ND, Sowers EG, Bopp CA, Strockbine NA (2007) Identification of Vibrio isolates by a multiplex PCR assay and rpoB sequence determination. J Clin Microbiol 45:134–140

    Article  PubMed  CAS  Google Scholar 

  23. Mollet C, Drancourt M, Raoult D (1997) rpoB sequence analysis as a novel basis for bacterial identification. Mol Microbiol 26:1005–1011

    Article  PubMed  CAS  Google Scholar 

  24. Kim DG, Kim YR, Kim EY, Cho HM, Ahn SH, Kong IS (2010) Isolation of the groESL cluster from Vibrio anguillarum and PCR detection targeting groEL gene. Fish Sci 76:803–810

    Article  CAS  Google Scholar 

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Acknowledgments

This work was supported by a grant from the National Fisheries Research and Development Institute (NFRDI), Republic of Korea. Y.-R. Kim also wishes to thank Novus International, Inc. for financial support in the form of a scholarship.

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Correspondence to In-Soo Kong.

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Hossain, M.T., Kim, YR., Kim, EY. et al. Detection of Vibrio cholerae and Vibrio vulnificus by duplex PCR specific to the groEL gene. Fish Sci 79, 335–340 (2013). https://doi.org/10.1007/s12562-012-0586-1

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  • DOI: https://doi.org/10.1007/s12562-012-0586-1

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