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Integrated plasma and urine metabolomics coupled with HPLC/QTOF-MS and chemometric analysis on potential biomarkers in liver injury and hepatoprotective effects of Er-Zhi-Wan

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Abstract

Metabolomics techniques are the comprehensive assessment of endogenous metabolites in a biological system and may provide additional insight into the molecular mechanisms. Er-Zhi-Wan (EZW) is a traditional Chinese medicine formula, which contains Fructus Ligustri Lucidi (FLL) and Herba Ecliptae (HE). EZW is widely used to prevent and treat various liver injuries through the nourishment of the liver. However, the precise molecular mechanism of hepatoprotective effects has not been comprehensively explored. Here, an integrated metabolomics strategy was designed to assess the effects and possible mechanisms of EZW against carbon tetrachloride-induced liver injury, a commonly used model of both acute and chronic liver intoxication. High-performance chromatography/quadrupole time-of-flight mass spectrometry (HPLC/QTOF-MS) combined with chemometric approaches including principal component analysis (PCA) and partial least squares-discriminant analysis (PLS-DA) were used to discover differentiating metabolites in metabolomics data of rat plasma and urine. Results indicate six differentiating metabolites, tryptophan, sphinganine, tetrahydrocorticosterone, pipecolic acid, l-2-amino-3-oxobutanoic acid and phosphoribosyl pyrophosphate, in the positive mode. Functional pathway analysis revealed that the alterations in these metabolites were associated with tryptophan metabolism, sphingolipid metabolism, steroid hormone biosynthesis, lysine degradation, glycine, serine and threonine metabolism, and pentose phosphate pathway. Of note, EZW has a potential pharmacological effect, which might be through regulating multiple perturbed pathways to the normal state. Our findings also showed that the robust integrated metabolomics techniques are promising for identifying more biomarkers and pathways and helping to clarify the function mechanisms of traditional Chinese medicine.

Overview of the integrated metabolomics strategy

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References

  1. Griffin JL, Walker LA, Garrod S, Holmes E, Shore RF, Nicholson JK (2000) Comp Biochem Physiol, Part B: Biochem Mol Biol 127:357–367

    Article  CAS  Google Scholar 

  2. Irie M, Fujimura Y, Yamato M, Miura D, Wariishi H (2014) Metabolomics 10:473–483

    Article  CAS  Google Scholar 

  3. Li M, Li H, Jiang P, Liu XQ, Xu D, Wang F (2014) Mol BioSyst 10:1055–1062

    Article  CAS  Google Scholar 

  4. Zhao XJ, Zhang Y, Meng XL, Yin PY, Deng C, Chen J, Wang Z, Xu GW (2008) J Chromatogr B Anal Technol Biomed Life Sci 873:151–158

    Article  CAS  Google Scholar 

  5. Antti H, Ebbels TMD, Keun HC, Bollard ME, Beckonert O, Lindon JC, Nicholson JK, Holmes E (2004) Chemom Intell Lab Syst 73:139–149

    Article  CAS  Google Scholar 

  6. Beyoğlu D, Idle JR (2013) J Hepatol 59(4):842–858

    Article  Google Scholar 

  7. Qiu J (2007) Nature 448:126–128

    Article  CAS  Google Scholar 

  8. Qiu J (2007) Nat Rev Drug Discov 6:506–507

    Article  CAS  Google Scholar 

  9. Wang M, Lamers RJ, Korthout HJ (2005) Phytother Res 19:173–182

    Article  CAS  Google Scholar 

  10. Gou X, Tao Q, Feng Q, Peng J, Sun S, Cao H (2013) J Pharm Biomed Anal 74:62–65

    Article  CAS  Google Scholar 

  11. The National Pharmacopoeia Commission of P.R. China (2010) Pharmacopoeia of the People’s Republic of China, vol. 1. Chinese Medical Science and Technology Press, Beijing, pp 412–413

    Google Scholar 

  12. Zhang AH, Sun H, Dou SS, Sun WJ, Wu XH, Wang P, Wang XJ (2013) Analyst 138:353–361

    Article  CAS  Google Scholar 

  13. Cai XJ, Yan B, Yao WF, Zhang L, Huang MY, Ding AW (2011) Chinese Pharmacological Bull 27(12):1774–1775

    Google Scholar 

  14. Gao HL, Wang DQ, Wang XY (2010) Chin J Integr Med 16(6):504–509

    Article  Google Scholar 

  15. Xu H, Su ZR, Huang W, Choi RC, Zheng YZ, Lau DT, Dong TT, Wang ZT, Tsim KW (2012) J Ethnopharmacol 143(1):109–115

    Article  Google Scholar 

  16. Yan B, Cai XJ, Yao WF, Zhang L, Huang MY, Ding AW (2012) China JChin Mater Med 37(9):1303–1305

    Google Scholar 

  17. Zhen C, Lifu S, Jinhong H, Qian S (1998) Acad J Sec Mil Med Univ 19(1):76–78

    Google Scholar 

  18. Kobori M, Yang Z, Gong D, Heissmeyer V, Zhu H, Jung YK, Gakidis MAM, Rao A, Sekine T, Ikegami F, Yuan C, Yuan J (2004) Cell Death Differ 11(1):123–130

    Article  CAS  Google Scholar 

  19. Han DW, Ma XH, Zhao YC, Yin L, Ji CX (1982) J Tradit Chin Med 2(2):83–90

    CAS  Google Scholar 

  20. Liu J (2005) J Ethnopharmacol 100(1–2):92–94

    Article  CAS  Google Scholar 

  21. Liu J, Liu Y, Klaassen CD (1994) J Ethnopharmacol 42(3):183–191

    Article  CAS  Google Scholar 

  22. Liu J, Liu Y, Parkinson A, Klaassen CD (1995) J Pharmacol Exp Ther 275(2):768–774

    CAS  Google Scholar 

  23. Cheng M, Wang QW, Fan YK, Liu XY, Wang L, Xie RM, Ho CC, Sun WJ (2011) J Ethnopharmacol 138(2):279–285

    Article  Google Scholar 

  24. Shimada T, Nakanishi T, Toyama A, Yamauchi S, Kanzaki A, Fujiwake H, Sato TA, Ikegawa M (2010) J Proteome Res 9(9):4490–4500

    Article  CAS  Google Scholar 

  25. Henkel C, Roderfeld M, Weiskirchen R, Berres ML, Hillebrandt S, Lammert F, Meyer HE, Stühler K, Graf J, Roeb E (2006) Proteomics 6(24):6538–6548

    Article  CAS  Google Scholar 

  26. Atmaca M, Bilgin HM, Obay BD, Diken H, Kelle M, Kale E (2011) J Physiol Biochem 67(4):569–576

    Article  CAS  Google Scholar 

  27. van Ginneken V, Verhey E, Poelmann R, Ramakers R, van Dijk KW, Ham L (2007) Biochim Biophys Acta 1771:1263–1270

    Article  Google Scholar 

  28. Garcia-Canaveras JC, Donato MT, Castell JV, Lahoz A (2011) J Proteome Res 10:4825–4834

    Article  CAS  Google Scholar 

  29. He M, Yao WF, Zhang L, Ding AW (2012) Zhongguo Zhong Yao Za Zhi 37(5):594–596

    CAS  Google Scholar 

  30. Nanji AA, Mendenhall CL, French SW (1989) Clin Exp Res 13(1):15–19

    Article  CAS  Google Scholar 

  31. Ramsay JO, Ten Berge JMF, Styan GPH (1984) Psychometrika 49:403–423

    Article  Google Scholar 

  32. Robert P, Escoufier Y (1976) Appl Stat 25:257–265

    Article  Google Scholar 

  33. Smilde AK, Westerhuis JA, De Jong S (2003) J Chemom 17:323–337

    Article  CAS  Google Scholar 

  34. Eriksson L, Johansson E, Kettaneh N, Trygg J, Wikstrom C, Wold S (2006) Multivariate and megavariate data analysis part I: basic principles and applications, second revised and enlarged edition. Sweden, Umetrics Academy, p 189

    Google Scholar 

  35. Pierce KM, Hope JL, Johnson KJ, Wright BW, Synovec RE (2005) J Chromatogr A 1096:101–110

    Article  CAS  Google Scholar 

  36. Smith CA, O’Maille G, Want EJ, Qin C, Trauger SA, Brandon TR, Custodio DE, Abagyan R, Siuzdak G (2005) Ther Drug Monit 27(6):747–751

    Article  CAS  Google Scholar 

  37. Wishart DS, Tzur D, Knox C. (2007) Nucleic Acids Res. (Database issue): D521-526.

  38. Kanehisa M (2002) Novartis Found Symp 247:91–101

    Article  CAS  Google Scholar 

  39. Xia J, Mandal R, Sinelnikov IV, Broadhurst D, Wishart DS (2012) Nucleic Acids Res. 40(Web Server issue): W127-33.

  40. Eriksson L, Johansson E, Kettaneh N, Trygg J, Wikstrom C, Wold S (2006) Multivariate and megavariate data analysis part I: basic principles and applications, second revised and enlarged edition. Umetrics Academy, Sweden, p 97

    Google Scholar 

  41. Van den Berg R, Hoefsloot HCJ, Westerhuis J, Smilde A, van der Werf MJ (2006) BMC Genomics 7:142

    Article  Google Scholar 

  42. Huang Y, Tian Y, Li G, Li Y, Yin X, Peng C, Xu F, Zhang Z (2013) Anal Bioanal Chem 405:4811–4822

    Article  CAS  Google Scholar 

  43. Zhang H, Fu P, Ke B, Wang S, Li M, Han L, Peng C, Zhang W, Liu R (2014) J Ethnopharmacol 154(1):55–64

    Article  Google Scholar 

  44. Fujita T, Hada T, Higashino K (1999) Clin Chim Acta 287:145–156

    Article  CAS  Google Scholar 

  45. Musiek ES, Yin H, Milne GL, Morrow JD (2005) Lipids 40(10):987–994

    Article  CAS  Google Scholar 

  46. Cho HJ, Kim JD, Lee WY, Chung BC, Choi MH (2009) Anal Chim Acta 632(1):101–108

    Article  CAS  Google Scholar 

  47. Zhang AH, Sun H, Sun WJ, Jiao GZ, Wang XJ (2013) Anal Methods 5:5294–5301

    Article  CAS  Google Scholar 

  48. Park SW, Kim M, Chen SW, Brown KM, D’Agati VD, Lee HT (2010) Lab Investig 90(8):1209–1224

    Article  CAS  Google Scholar 

  49. Natasha CL, Marion BS (2010) Steroids 75(6):390–399

    Article  Google Scholar 

  50. Fujita T, Amuro Y, Hada T, Higashino K (1999) Clin Chim Acta 287(1–2):99–109

    Article  CAS  Google Scholar 

  51. Matsuda Y, Fujita T, Hada T, Higashino K (2000) Hepatol Res 18(2):132–140

    Article  Google Scholar 

  52. Bernard LH (2002) J Biol Chem 277(50):47965–47971

    Article  Google Scholar 

  53. Kunjara MS, Ali SA, Greenbaum AL, McLean P (1987) Biochem J 244:101–108

    CAS  Google Scholar 

Download references

Acknowledgments

This work was financially supported by National Natural Science Foundation of China (Grant No. 81001599, 81173547, and 81373972) and A Project Funded by the Priority Academic Program Development of Jiangsu Higher Education Institutions (PAPD).

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Correspondence to Li Zhang or Anwei Ding.

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Yao, W., Gu, H., Zhu, J. et al. Integrated plasma and urine metabolomics coupled with HPLC/QTOF-MS and chemometric analysis on potential biomarkers in liver injury and hepatoprotective effects of Er-Zhi-Wan. Anal Bioanal Chem 406, 7367–7378 (2014). https://doi.org/10.1007/s00216-014-8169-x

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  • DOI: https://doi.org/10.1007/s00216-014-8169-x

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