Skip to main content
Log in

Cloning and chromosomal location of human genes inducible by type I interferon

  • Published:
Somatic Cell and Molecular Genetics

Abstract

When cells are treated with interferon several new proteins are induced. We have isolated by differential screening two cDNA clones corresponding to human genes inducible by IFN-α, termed IFI-4 and IFI-54K. The accumulation of the corresponding mRNA was followed as a function of either IFN dose or of time. The IFI-4 and IFI-54K genes, as well as two previously isolated IFN-inducible genes, namely the IFI-56K and low-molecular-weight 2–5A synthetase, were localized on the human chromosomes. Using cloned probes on Southern blots of DNA from a panel of rodent-human somatic cell hybrids, we have assigned the IFI-4 gene to chromosome 1 and the gene coding for the low-molecular-weight 2–5A synthetase to chromosome 12. We also showed that the IFI-54K and IFI-56K genes, unlike most of the IFN-inducible genes, are syntenic. They are both located on chromosome 10. In addition, evidence is given for the presence of a pseudogene homologous to IFI-56K on chromosome 13.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Literature cited

  1. Lengyel, P. (1982).Annu. Rev. Biochem. 51:251–282.

    PubMed  Google Scholar 

  2. Content, J. (1986). InMolecular Basis of Viral Replication, (ed.) Perez-Beroff, R. (Plenum Press, New York), pp. 163–189.

    Google Scholar 

  3. Isaacs, D., Clarke, J.R., Tyrrell, D.A., Webster, A.D.B., and Valman, H.B. (1981).Lancet 2:950–952.

    PubMed  Google Scholar 

  4. Luster, A.D., Jhanwar, S.C., Chaganti, R.S., Kersey, J.H., and Ravetch, J.V. (1987).Proc. Natl. Acad. Sci. U.S.A. 84:2868–2871.

    PubMed  Google Scholar 

  5. Larner, A.C., Jonak, G.C., Cheng, Y.S.E., Korant, B., Knight, E., and Darnell, J.E.Jr. (1984).Proc. Natl. Acad. Sci. U.S.A. 81:6733–6737.

    PubMed  Google Scholar 

  6. Friedman, R.L., Manly, S.P., McMahon, M., Kerr, I.M., and Stark, G.R. (1984).Cell 38:745–755.

    PubMed  Google Scholar 

  7. Kelly, J.M., Porter, C.G., Chernajovsky, Y., Gilbert, C.S., Stark, G.R., and Kerr, I.M. (1986).EMBO J. 5:1601–1606.

    PubMed  Google Scholar 

  8. Friedman, R.L., and Stark, G.R. (1985).Nature 314:637–639.

    PubMed  Google Scholar 

  9. Kelly, J.M., Gilbert, C.S., Stark, G.R., and Kerr, I.A. (1985).Eur. J. Biochem. 153:367–371.

    PubMed  Google Scholar 

  10. Kusari, J., and Sen, G.C. (1986).Mol. Cell. Biol. 6:2062–2067.

    PubMed  Google Scholar 

  11. Kusari, J., and Sen, G.C. (1987).Mol. Cell. Biol. 7:528–531.

    PubMed  Google Scholar 

  12. Dron, M., and Tovey, M. (1983).J. Gen. Virol. 64:2641–2647.

    PubMed  Google Scholar 

  13. Tovey, M.G., Mogensen, K.E., Lebleu, B., Mechti, N., and Begonlours-Guymarho, J. (1983).J. Gen. Virol. 64:2649–2653.

    PubMed  Google Scholar 

  14. Dron, M., Tovey, M., and Eid, P. (1985).J. Gen. Virol. 66:787–795.

    PubMed  Google Scholar 

  15. McMahon, M., Stark, G.R., and Kerr, I.M. (1986)J. Virol. 57:362–366.

    PubMed  Google Scholar 

  16. Robson, E.B., and Lamm, L.U. (1984).Cytogenet. Cell Genet. 37:47–70.

    PubMed  Google Scholar 

  17. Goodfellow, P.N., Jones, E.A., van Heyningen, V., Solomon, E., Bobrow, M., Miggiano, V., and Bodmer, W.F. (1975).Nature 254:267–269.

    PubMed  Google Scholar 

  18. Karin, M., Eddy, R.L., Henty, W.M., Haley, L.L., Byers, M.G., and Shows, T.B. (1984).Proc. Natl. Acad. Sci. U.S.A. 81:5494–5498.

    PubMed  Google Scholar 

  19. Shulman, L.M., Barker, P.E., Hart, J.T., Messer Peters, P.G., and Ruddle, F.H. (1984).Somat. Cell. Mol. Genet. 10:247–257.

    PubMed  Google Scholar 

  20. Williams, B.R.G., Saunders, M.E., and Williard, H.F. (1986).Somat. Cell. Mol. Genet. 12:403–408.

    PubMed  Google Scholar 

  21. De Benedetti, A., Pytel, B.A., and Baglioni, C. (1987).Proc. Natl. Acad. Sci. U.S.A. 84:658–662.

    PubMed  Google Scholar 

  22. Benech, P., Mory, Y., Revel, M., and Chebath, J. (1985).EMBO J. 4:2249–2256.

    PubMed  Google Scholar 

  23. Saunders, M.E., Gewert, D.R., Tugwell, M.E., McMahon, M., and Williams, B.R.G. (1985).EMBOJ. 4:1761–1768.

    Google Scholar 

  24. Levy, D., Larner, A., Chaudhuri, A., Babiss, L.E., and Darnell, J.E., Jr., (1986).Proc. Natl. Acad. Sci. U.S.A. 83:8929–8933.

    PubMed  Google Scholar 

  25. Wathelet, M., Moutschen, S., Cravador, A., De Wit, L., Defilippi, P., Huez, G., and Content, J. (1986).FEBS Lett. 196:113–120.

    PubMed  Google Scholar 

  26. Wathelet, M., Moutschen, S., Defilippi, P., Cravador, A., Collet, M., Huez, G., and Content, J. (1986).Eur. J. Biochem. 155:11–17.

    PubMed  Google Scholar 

  27. Horiberger, M.A., Wathelet, M., Szpirer, J., Szpirer, C., Islam, Q., Levan, G., Huez, G., and Content, J. (1988).Somat. Cell Mol. Genet. 14, No. 2, pp 123–131.

    PubMed  Google Scholar 

  28. Maniatis, T., Fritsch, E.F., and Sambrook, J. (1982).Molecular Cloning, A Laboratory Manual, (Cold Spring Harbor Laboratory, Cold Spring Harbor, New York).

    Google Scholar 

  29. Wathelet, M.G., Clauss, I.M., Content, J., and Huez, G. (1988).Eur. J. Biochem. 174:323–329.

    PubMed  Google Scholar 

  30. Melton, D.A., Krieg, P.A., Rebagliati, M.R., Maniatis, T., Zinn, K., and Green, M.R. (1984).Nucleic Acids Res. 12:7033–7056.

    Google Scholar 

  31. Content, J., DeWit, L., Derynck, R., DeClercq, E., and Fiers, W. (1982).Virology 122:466–470.

    PubMed  Google Scholar 

  32. Littlefield, J.W. (1964).Science 145:709–710.

    PubMed  Google Scholar 

  33. Kusano, T., Long, C., and Green, H. (1971).Proc. Natl. Acad. Sci. U.S.A. 68:82–86.

    PubMed  Google Scholar 

  34. Islam, M.Q., and Levan, G. (1987).Hereditas 107:127–130.

    PubMed  Google Scholar 

  35. Gross-Bélard, M., Oudet, P., and Chambon, P. (1973).Eur. J. Biochem. 36:32.

    PubMed  Google Scholar 

  36. Southern, E.M. (1975).J. Mol. Biol. 98:503–518.

    PubMed  Google Scholar 

  37. Lalley, P.A., and McKusick, V.A. (1985).Cytogenet. Cell. Genet. 40:536–566.

    PubMed  Google Scholar 

  38. Chirgwin, J.M., Schaefer, I.M., Diaz, J.A., and Lalley, P.A. (1984).Somat. Cell. Mol. Genet. 10:633–637.

    PubMed  Google Scholar 

  39. Samanta, H., Pravtcheva, D.D., Ruddle, F.H., and Lengyel, P. (1984).J. Interferon Res. 4:295–300.

    PubMed  Google Scholar 

  40. Kusari, J., Szabo, P., Grzeschik, K.-H., and Sen, G.C. (1987).J. Interferon Res. 7:53–59.

    PubMed  Google Scholar 

  41. Larner, A.C., Chauduri, A., and Darnell, J.E. Jr. (1986).J. Biol. Chem. 261:453–459.

    PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Wathelet, M.G., Szpirer, J., Nols, C.B. et al. Cloning and chromosomal location of human genes inducible by type I interferon. Somat Cell Mol Genet 14, 415–426 (1988). https://doi.org/10.1007/BF01534709

Download citation

  • Received:

  • Revised:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF01534709

Keywords

Navigation