Abstract
An important trait defining fresh tomato marketability is fruit shelf life. Exotic germplasm of Solanum pimpinellifolium is able to prolong shelf life. Sixteen recombinant inbred lines with differing values of shelf life and fruit weight were derived by antagonistic-divergent selection from an interspecific cross involving Solanum pimpinellifolium. The objective of this study was to evaluate these recombinant inbred lines for many fruit quality traits such as diameter, height, size, acidity, colour, firmness, shelf life and weight, and to characterize them by amplified fragment length polymorphism markers. For most traits, a wide range of genetic variability was found and a wide range of molecular variation was also detected. Both sets of data allowed the identification of recombinant inbred lines by means of cluster analysis and principal component analysis. Genetic association among some amplified fragment length polymorphism markers and fruit quality traits, suggested by the principal component analysis, could be identified by single point analysis. Potential molecular markers underlying agronomical traits were detected in these recombinant inbred lines.
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Bernacchi D., Beck-Bunn T., Emmatty D., Eshed Y., Inai S., López J. et al. 1998 Advanced backcross QTL analysis of tomato. II. Evaluation of near isogenic lines carrying single-donor introgressions for desirable wild QTL-alleles derived from Lycopersicon hirsutum and L. pimpinellifolium. Theor. Appl. Genet. 97, 170–180.
Blears M. J., De Grandis S. A., Lee H. and Trevors J. T. 1998 Amplified fragment length polymorphism (AFLP): a review of the procedure and its applications. J. Ind. Micr. Biot. 21, 99–114.
Chatfield C. and Collins A. J. 1986 Introduction to multivariate analysis. Chapman and Hall, London, UK.
de Vicente M. C. and Tanksley S. D. 1993 QTL analysis of transgresive segregation in an interspecific tomato cross. Genetics 134, 585–596.
Dholakia B. B., Ammiraju J. S. S., Singh H., Lagu M. D., Röder M. S., Rao V. S. et al. 2003 Molecular marker analysis of kernel size and shape in bread wheat. Plant Breed. 122, 392–395.
Foolad M. R. 2007 Genome mapping and molecular breeding of tomato. Int. J. Plant. Genomics (doi:10.1155/2007/64358).
Galiana-Balaguer L., Rosello S. and Nuez F. 2006 Characterization and selection of balanced sources of variability for breeding tomato (Lycopersicon) internal quality. Genet. Res. Crop Evol. 53, 907–923.
Giovannoni J. J. 2004 Genetic regulation of fruit development and ripening. Plant Cell 16, S160–S170.
Grandillo S. and Tanksley S. D. 1996 QTL analysis of horticultural traits differentiating the cultivated tomato from the closely related species Lycopersicon pimpinellifolium. Theor. Appl. Genet. 92, 935–951.
Hua J., Xing Y., Wu W., Xu C., Sun X., Yu S. et al. 2003 Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid. Proc. Nat. Acad. Sci. USA 100, 2574–2579.
Jaccard P. 1901 Étude comparative de la distribution florale dans une portion des Alpes et des Jura. Bull. Soc. Vaud. Sci. Nat. 37, 547–579.
Kearsey M. J. and Pooni H. S. 1996 The genetical analysis of quantitative traits. Chapman and Hall, London, UK.
Lecomte L., Duffe P., Buret M., Servin B., Hospital F. and Causse M. 2004 Marker-assisted introgression of five QTLs controlling fruit quality traits into three tomato lines revealed interactions between QTLs and genetic backgrounds. Theor. Appl. Genet. 109, 658–668.
Lippman Z. and Tanksley S. D. 2001 Dissecting the genetic pathway to extreme fruit size in tomato using a cross between the small-fruit wild species Lycopersicon pimpinellifolium and L. esculentum var. Giant Heirloom. Genetics 158, 413–422.
Marfil C. F., Masuelli R. W., Davison J. and Comail L. 2006 Genomic instability in Solanum tuberosum × Solanum kurtzianum interspecific hybrids. Genome 49, 104–113.
Pratta G., Zorzoli R. and Picardi L. A. 1996 Evaluación de caracteres de interés agronómico en especies del género Lycopersicon. Hortic. Argent. 15, 25–32.
Pratta G. R., Zorzoli R., Picardi L. A. and Valle E. M. 2006 Variability for the in vitro culture response in a set of tomato genotypes. Biol. Plant. 50, 421–424.
Rodriguez G., Pratta G., Zorzoli R. and Picardi L. A. 2005 Transgressive segregation for fruit quality traits in a cross between exotic and mutant genotypes of Lycopersicon. N. Z. J. Crop Hortic. Sci. 33, 373–379.
Rodriguez G. R., Pratta G. R., Zorzoli R. and Picardi L. A. 2006 Recombinant lines obtained from an interspecific cross among Lycopersicon species selected by fruit weight and fruit shelf life. J. Am. Soc. Hortic. Sci. 131, 651–656.
Roldán-Ruiz I., Calsyn E., Giliand T. J., Coll R., van Eijk M. J. T. and De Loose M. 2001 Estimating genetic conformity between related ryegrass (Lolium) varieties. II. AFLP characterisation. Mol. Breed. 6, 593–602.
Schuelter A. R., Finger F. L., Casali V. W. D., Brommonschenkel S. H. and Otoni W. C. 2002 Inheritance and genetic linkage analysis of a firm-ripening tomato mutant. Plant Breed. 121, 338–342.
Shaked H., Kashkush K., Ozkan H., Feldman M. and Levy A. 2001 Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat. Plant Cell 13, 1749–1759.
Shapiro S. S. and Wilk M. B. 1965 An analysis of variance test for normality (complete samples). Biometrika 52, 591–611.
Zorzoli R., Pratta G. and Picardi L. A. 1998 Efecto de los mutantes nor y rin y de genes silvestres sobre características del fruto en Lycopersicon. Mendeliana 13, 12–19.
Zorzoli R., Pratta G. and Picardi L. A. 2000 Variabilidad para la vida postcosecha y el peso de los frutos en tomate para familias F3 de un híbrido interespecífico. Pesq. Agrop. Bras. 35, 2423–2427.
Zuriaga E., Blanca J. M., Cordero L., Sifres A., Blas-Cerdán W. G., Morales R. et al. 2009 Genetic and bioclimatic variation in Solanum pimpinellifolium. Genet. Res. Crop Evol. 56, 39–51.
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Pratta G. R., Rodriguez G. R., Zorzoli R., Valle E. M. and Picardi L. A. 2011 Phenotypic and molecular characterization of selected tomato recombinant inbred lines derived from the cross Solanum lycopersicum × S. pimpinellifolium. J. Genet. 90, 229–237
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PRATTA, G.R., RODRIGUEZ, G.R., ZORZOLI, R. et al. Phenotypic and molecular characterization of selected tomato recombinant inbred lines derived from the cross Solanum lycopersicum × S. pimpinellifolium . J Genet 90, 229–237 (2011). https://doi.org/10.1007/s12041-011-0063-0
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DOI: https://doi.org/10.1007/s12041-011-0063-0