Abstract
A putative gene (gadlbhye1) encoding glutamate decarboxylase (GAD) was cloned from Lactobacillus brevis HYE1 isolated from kimchi, a traditional Korean fermented vegetable. The amino acid sequences of GADLbHYE1 showed 48% homology with the GadA family and 99% identity with the GadB family from L. brevis. The cloned GADLbHYE1 was functionally expressed in Escherichia coli using inducible expression vectors. The expressed recombinant GADLbHYE1 was successfully purified by Ni–NTA affinity chromatography, and had a molecular mass of 54 kDa with optimal hydrolysis activity at 55 °C and pH 4.0. Its thermal stability was determined to be higher than that of other GADs from L. brevis, based on its melting temperature (75.18 °C). Kinetic parameters including Km and Vmax values for GADLbHYE1 were 4.99 mmol/L and 0.224 mmol/L/min, respectively. In addition, the production of gamma-aminobutyric acid in E. coli BL21 harboring gadlbhye1/pET28a was increased by adding pyridoxine as a cheaper coenzyme.
Similar content being viewed by others
References
Adeghate E, Ponery AS (2002) GABA in the endocrine pancreas: cellular localization and function in normal and diabetic rats. Tissue Cell 34:1–6. https://doi.org/10.1054/tice.2002.0217
Bergholz TM, Tarr CL, Christensen LM, Betting DJ, Whittam TS (2007) Recent gene conversions between duplicated glutamate decarboxylase genes (gadA and gadB) in pathogenic Escherichia coli. Mol Biol Evol 24:2323–2333. https://doi.org/10.1093/molbev/msm163
Biase DD, Tramonti A, John RA, Bossa F (1996) Isolation, overexpression, and biochemical characterization of the two isoforms of glutamic acid decarboxylase from Escherichia coli. Protein Expr Purif 8:430–438. https://doi.org/10.1006/prep.1996.0121
Capitani G, Biase DD, Aurizi C, Gut H, Bossa F, Grütter MG (2003) Crystal structure and functional analysis of Escherichia coli glutamate decarboxylase. EMBO J 22:4027–4037. https://doi.org/10.1093/emboj/cdg403
Casado Muñoz MdC, Benomar N, Lerma LL, Gálvez A, Abriouel H (2014) Antibiotic resistance of Lactobacillus pentosus and Leuconostoc pseudomesenteroides isolated from naturally-fermented Aloreña table olives throughout fermentation process. Int J Food Microbiol 172:110–118. https://doi.org/10.1016/j.ijfoodmicro.2013.11.025
Cho YR, Chang JY, Chang HC (2007) Production of gamma-aminobutyric acid (GABA) by Lactobacillus buchneri isolated from kimchi and its neuroprotective effect on neuronal cells. J Microbiol Biotechnol 17:104–109
Cozzani I, Misuri A, Santoni C (1970) Purification and general properties of glutamate decarboxylase from Clostridium perfringens. Biochem J 118:135–141. https://doi.org/10.1042/bj1180135
Fagg GE, Foster AC (1983) Amino acid neurotransmitters and their pathways in the mammalian central nervous system. Neuroscience 9:701–719. https://doi.org/10.1016/0306-4522(83)90263-4
Fan E, Huang J, Hu S, Mei L, Yu K (2012) Cloning, sequencing and expression of a glutamate decarboxylase gene from the GABA-producing strain Lactobacillus brevis CGMCC 1306. Ann Microbiol 62:689–698. https://doi.org/10.1007/s13213-011-0307-5
Gevers D, Huys G, Swings J (2001) Applicability of rep-PCR fingerprinting for identification of Lactobacillus species. FEMS Microbiol Lett 205:31–36. https://doi.org/10.1111/j.1574-6968.2001.tb10921.x
Ghatge MS et al (2012) Pyridoxal 5′-phosphate is a slow tight binding inhibitor of E. coli pyridoxal kinase. PLoS ONE 7:e41680. https://doi.org/10.1371/journal.pone.0041680
Guijin Z, Bown AW (1997) The rapid determination of γ-aminobutyric acid. Phytochemistry 44:1007–1009. https://doi.org/10.1016/S0031-9422(96)00626-7
Hao R, Schmit JC (1991) Purification and characterization of glutamate decarboxylase from Neurospora crassa conidia. J Biol Chem 266:5135–5139
Hiraga K, Ueno Y, Oda K (2008a) Glutamate decarboxylase from Lactobacillus brevis: activation by ammonium sulfate. Biosci Biotechnol Biochem 72:1299–1306. https://doi.org/10.1271/bbb.70782
Hiraga K, Ueno Y, Sukontasing S, Tanasupawat S, Oda K (2008b) Lactobacillus senmaizukei sp. nov., isolated from Japanese pickle. Int J Syst Evol Microbiol 58:1625–1629. https://doi.org/10.1099/ijs.0.65677-0
Huang J, Mei L-h, Wu H, Lin D-q (2007) Biosynthesis of γ-aminobutyric acid (GABA) using immobilized whole cells of Lactobacillus brevis. World J Microbiol Biotechnol 23:865–871. https://doi.org/10.1007/s11274-006-9311-5
Huang Y, Su L, Wu J (2016) Pyridoxine supplementation improves the activity of recombinant glutamate decarboxylase and the enzymatic production of γ-aminobutyric acid. PLoS ONE 11:e0157466. https://doi.org/10.1371/journal.pone.0157466
Inoue K, Shirai T, Ochiai H, Kasao M, Hayakawa K, Kimura M, Sansawa H (2003) Blood-pressure-lowering effect of a novel fermented milk containing γ-aminobutyric acid (GABA) in mild hypertensives. Eur J Clin Nutr 57:490–495
Jakobs C, Jaeken J, Gibson KM (1993) Inherited disorders of GABA metabolism. J Inherit Metab Dis 16:704–715. https://doi.org/10.1007/bf00711902
Jin Z, Mendu SK, Birnir B (2013) GABA is an effective immunomodulatory molecule. Amino Acids 45:87–94. https://doi.org/10.1007/s00726-011-1193-7
Kim S-H, Shin B-H, Kim Y-H, Nam S-W, Jeon S-J (2007) Cloning and expression of a full-length glutamate decarboxylase gene from Lactobacillus brevis BH2. Biotechnol Bioprocess Eng 12:707–712. https://doi.org/10.1007/bf02931089
Kim H-W, Kashima Y, Ishikawa K, Yamano N (2009) Purification and characterization of the first archaeal glutamate decarboxylase from Pyrococcus horikoshii. Biosci Biotechnol Biochem 73:224–227. https://doi.org/10.1271/bbb.80583
Komatsuzaki N, Shima J, Kawamoto S, Momose H, Kimura T (2005) Production of γ-aminobutyric acid (GABA) by Lactobacillus paracasei isolated from traditional fermented foods. Food Microbiol 22:497–504. https://doi.org/10.1016/j.fm.2005.01.002
Komatsuzaki N, Nakamura T, Kimura T, Shima J (2008) Characterization of glutamate decarboxylase from a high γ-aminobutyric acid (GABA)-producer, Lactobacillus paracasei. Biosci Biotechnol Biochem 72:278–285. https://doi.org/10.1271/bbb.70163
Li H, Gao D, Cao Y, Xu H (2008) A high γ-aminobutyric acid-producing Lactobacillus brevis isolated from Chinese traditional paocai. Ann Microbiol 58:649–653. https://doi.org/10.1007/bf03175570
Li H, Qiu T, Huang G, Cao Y (2010) Production of γ-aminobutyric acid by Lactobacillus brevis NCL912 using fed-batch fermentation. Microb Cell Fact 9:85. https://doi.org/10.1186/1475-2859-9-85
Li H, Li W, Liu X, Cao Y (2013) gadA gene locus in Lactobacillus brevis NCL912 and its expression during fed-batch fermentation. FEMS Microbiol Lett 349:108–116. https://doi.org/10.1111/1574-6968.12301
Lim HS, Cha IT, Lee H, Seo MJ (2016) Optimization of γ-aminobutyric acid production by Enterococcus faecium JK29 isolated from a traditional fermented foods. Microbiol Biotechnol Lett 44:26–33
Lim HS, Cha IT, Roh SW, Shin HH, Seo MJ (2017) Enhanced production of γ-aminobutyric acid by optimizing culture conditions of Lactobacillus brevis HYE1 isolated from Kimchi: a Korean fermented food. J Microbiol Biotechnol 27:450–459. https://doi.org/10.4014/jmb.1610.10008
Manyam BV, Katz L, Hare TA, Kaniefski K, Tremblay RD (1981) Isoniazid-induced elevation of CSF GABA levels and effects on chorea in huntington’s disease. Ann Neurol 10:35–37. https://doi.org/10.1002/ana.410100107
Niesen FH, Berglund H, Vedadi M (2007) The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability. Nat Protoc 2:2212–2221
Okada Y, Taniguchi H, Schimada C (1976) High concentration of GABA and high glutamate decarboxylase activity in rat pancreatic islets and human insulinoma. Science 194:620–622. https://doi.org/10.1126/science.185693
Park K-B, Oh S-H (2007) Cloning, sequencing and expression of a novel glutamate decarboxylase gene from a newly isolated lactic acid bacterium, Lactobacillus brevis OPK-3. Bioresour Technol 98:312–319. https://doi.org/10.1016/j.biortech.2006.01.004
Park JY, Jeong S-J, Kim JH (2014) Characterization of a glutamate decarboxylase (GAD) gene from Lactobacillus zymae. Biotechnol Lett 36:1791–1799. https://doi.org/10.1007/s10529-014-1539-9
Rizzello CG, Cassone A, Di Cagno R, Gobbetti M (2008) Synthesis of angiotensin i-converting enzyme (ACE)-inhibitory peptides and γ-aminobutyric acid (GABA) during sourdough fermentation by selected lactic acid bacteria. J Agric Food Chem 56:6936–6943. https://doi.org/10.1021/jf800512u
Sa HD, Park JY, Jeong SJ, Lee KW, Kim JH (2015) Characterization of glutamate decarboxylase (GAD) from Lactobacillus sakei A156 isolated from Jeot-gal. J Microbiol Biotechnol 25:696–703
Seo M-J, Nam Y-D, Lee S-Y, Park S-L, Yi S-H, Lim S-I (2013) Expression and characterization of a glutamate decarboxylase from Lactobacillus brevis 877G producing γ-aminobutyric acid. Biosci Biotechnol Biochem 77:853–856. https://doi.org/10.1271/bbb.120785
Shin S-M, Kim H, Joo Y, Lee S-J, Lee Y-J, Lee SJ, Lee D-W (2014) Characterization of glutamate decarboxylase from Lactobacillus plantarum and Its C-terminal function for the pH dependence of activity. J Agric Food Chem 62:12186–12193. https://doi.org/10.1021/jf504656h
Siragusa S, De Angelis M, Di Cagno R, Rizzello CG, Coda R, Gobbetti M (2007) Synthesis of γ-aminobutyric acid by lactic acid bacteria isolated from a variety of Italian cheeses. Appl Environ Microbiol 73:7283–7290. https://doi.org/10.1128/aem.01064-07
Tian J, Dang H, Chen Z, Guan A, Jin Y, Atkinson MA, Kaufman DL (2013) γ-Aminobutyric acid regulates both the survival and replication of human β-cells. Diabetes 62:3760–3765. https://doi.org/10.2337/db13-0931
Tsuchiya K, Nishimura K, Iwahara M (2003) Purification and characterization of glutamate decarboxylase from Aspergillus oryzae. Food Sci Technol Res 9:283–287. https://doi.org/10.3136/fstr.9.283
Yamada RH, Tsuji T, Nose Y (1977) Uptake and utilization of vitamin B6 and its phosphate esters by Escherichia coli. J Nutr Sci Vitaminol 23:7–17
Yang S-Y, Lin Q, Lu Z-X, Lü F-X, Bie X-M, Zou X-K, Sun L-J (2008) Characterization of a novel glutamate decarboxylase from Streptococcus salivarius ssp. thermophilus Y2. J Chem Technol Biotechnol 83:855–861. https://doi.org/10.1002/jctb.1880
Yu JJ, Oh SH (2011) γ-Aminobutyric acid production and glutamate decarboxylase activity of Lactobacillus sakei OPK2-59 isolated from Kimchi. Korean J Microbiol 47:316–322
Funding
This work was supported by Main Research Programs of the Korea Food Research Institute (KFRI) funded by the Ministry of Science, ICT & Future Planning [Grant Number E0170602-01]; Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Science, ICT & Future Planning [Grant Number NRF-2014R1A1A1002980]; Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education [Grant Number NRF-2016R1D1A1B03931582].
Author information
Authors and Affiliations
Contributions
All authors conceived the experiments and discussed the results. HSL and HL performed the experiments and analyzed the data with D-HS, I-TC and M-JS. D-HS, Y-DN and M-JS contributed to the writing of the paper.
Corresponding author
Ethics declarations
Conflict of interest
The authors declare that there are no conflicts of interest.
Rights and permissions
About this article
Cite this article
Lim, H.S., Seo, DH., Cha, IT. et al. Expression and characterization of glutamate decarboxylase from Lactobacillus brevis HYE1 isolated from kimchi. World J Microbiol Biotechnol 34, 44 (2018). https://doi.org/10.1007/s11274-018-2427-6
Received:
Accepted:
Published:
DOI: https://doi.org/10.1007/s11274-018-2427-6