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Molecular structure, vibrational spectra and potential energy distribution of protopine using ab initio and density functional theory

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Abstract

This work is devoted to theoretical study on molecular structure of protopine. The equilibrium geometry, harmonic vibrational frequencies and infrared intensities were calculated by ab initio Hartree-Fock and density functional B3LYP methods with the 6-31G(d) basis set and were interpreted in terms of potential energy distribution (PED) analysis. The internal coordinates were optimized repeatedly for many times to maximize the PED contributions. A detailed interpretation of the infrared spectra of protopine is reported. The calculations are in agreement with experiment. The thermodynamic functions of the title compound were also performed at HF/6-31G(d) and B3LYP/6-31G(d) level of theory. The FT-IR spectra of protopine were recorded in solid phase.

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References

  1. B. Jiang, K. Cao, and R. Wang, Eur. J. Pharmacol., 506, 93–100 (2004).

    Article  CAS  Google Scholar 

  2. D. Y. Wang, M. Z. Cheng, C. G. Wang, et al., Chin. J. Integr. Trad. Wes. Med., 6, 477–479 (1986).

    CAS  Google Scholar 

  3. V. N. Burtsev, E. N. Dormidontov, and V. N. Saliaev, Kardiologiia, 18, 76–79 (1978).

    CAS  Google Scholar 

  4. Z. A. Lu, D. C. Wan, Z. H. Chen, and X. H. Wang, Chin. Pharmaceut. J., 30, 81–84 (1992).

    Google Scholar 

  5. L. S. Song, G. J. Ren, Z. L. Chen, et al., Brit. J. Pharmacology, 129, 893–900 (2000).

    Article  CAS  Google Scholar 

  6. Y. H. Huang, Z. Z. Zhang, and J. X. Jiang, Acta Pharmacol. Sinica, 12, 16–19 (1991).

    CAS  Google Scholar 

  7. R. X. Zhong, R. R. Shi, L. X. Huang, et al., Chin. Trad. Herb. Drugs., 17, 303–306 (1986).

    Google Scholar 

  8. C. X. Teng, Z. H. Chen, and G. S. Zhao, Acad. J. Kunming Med. Coll., 10, 44–46 (1989).

    Google Scholar 

  9. F. N. Ko, T. S. Wu, S. T. Lu, et al., Jpn. J. Pharmacol., 58, 1–9 (1992).

    Article  CAS  Google Scholar 

  10. S. R. Kim, S. Y. Hwang, Y. P. Jang, et al., Planta Medica, 65, 218–221 (1999).

    Article  CAS  Google Scholar 

  11. A. Z. Sadikov, B. Babaev, and T. T. Shakirov, Chem. Natur. Compounds., 10, No. 6, 852 (1976).

    Article  Google Scholar 

  12. H. Takahashi, M. Iguchi, and M. Onda, Chem. Pharmaceut. Bull., 33, 4775–4782 (1985).

    CAS  Google Scholar 

  13. L. Dolejs, J. Slavik, and V. Hanus, Coll. Czechoslovak Chem. Commun., 29, No. 10, 2479 (1964).

    CAS  Google Scholar 

  14. J. Tousek, K. Malinakova, J. Dostal, and R. Marek, Magn. Reson. Chem., 43, No. 7, 578–581 (2005).

    Article  CAS  Google Scholar 

  15. M. J. Frisch, G. W. Trucks, H. B. Schlegal, et al. Gaussian, Inc., Wallingford CT (2004).

  16. H. B. Schlegel, J. Comput. Chem., 3, 214–218 (1982).

    Article  CAS  Google Scholar 

  17. P. Hohenberg and W. Kohn, Phys. Rev., B136, 864–871 (1964).

    Article  Google Scholar 

  18. A. D. Becke, J. Chem. Phys., 98, 5648–5652 (1993).

    Article  CAS  Google Scholar 

  19. C. Lee, W. Yang, and R. G. Parr, Phys. Rev., B37, 785–789 (1988).

    Google Scholar 

  20. N. Sundaraganesan, H. Saleem, S. Mohan, and M. Ramalingam, Spectrochim. Acta, A61, 377–385 (2005).

    Google Scholar 

  21. N. Sundaraganesn, S. Ilakiamani, H. Saleem, et al., ibid., 2995–3001.

  22. M. H. Jamroz Vibrational Energy Distribution Analysis: VEDA 4 Program, Warsaw (2004).

  23. S. R. Hall and F. R. Ahmed, Acta Crystallogr., B24, 337–346 (1968).

    Google Scholar 

  24. P. L. Fast, J. Corchado, M. L. Sanches, and D. G. Truhlar, J. Phys. Chem., A103, 3139–3143 (1999).

    Google Scholar 

  25. V. Krishnakumar and R. J. Xavier, Spectrochim. Acta, A60, 709–714 (2004).

    Google Scholar 

  26. V. Krishnakumar and R. J. Xavier, Indian J. Pure Appl. Phys., 41, 597–601 (2003).

    CAS  Google Scholar 

  27. V. Krishnakumar, R. J. Xavier, and T. Chithambarathanu, Spectrochim. Acta, A62, 931–939 (2005).

    Google Scholar 

  28. S. J. Bunce, H. G. Edwards, A. F. Johnson, et al., ibid., A49, 775–783 (1993).

    Google Scholar 

  29. V. Krishnakumar and R. Ramasamy, ibid., A61, 673–683 (2005).

    Google Scholar 

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Correspondence to N. Misra.

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Original Russian Text Copyright © 2009 by S. A. Siddiqui, A. Dwivedi, P. K. Singh, T. Hasan, S. Jain, O. Prasad, and N. Misra

The text was submitted by the authors in English. Zhurnal Strukturnoi Khimii, Vol. 50, No. 3, pp. 433–442, May–June, 2009.

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Siddiqui, S.A., Dwivedi, A., Singh, P.K. et al. Molecular structure, vibrational spectra and potential energy distribution of protopine using ab initio and density functional theory. J Struct Chem 50, 411–420 (2009). https://doi.org/10.1007/s10947-009-0062-7

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  • DOI: https://doi.org/10.1007/s10947-009-0062-7

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