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Characterization of the suppressive effects of the biological control strain VAR03-1 of Rhizobium vitis on the virulence of tumorigenic R. vitis

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Abstract

Rhizobium vitis: strain VAR03-1 is a biological control agent that suppresses grapevine crown gall disease caused by a tumorigenic strain of R. vitis (Ti). Both acetosyringone-induced expression of a virulence gene and the growth of Ti were suppressed in vitro when it was cultivated in the VAR03-1 culture filtrate. These inhibitory effects were reduced by high-temperature treatment or incubation for 72 h. Both activities were detected in the high molecular weight fraction (> 100 kDa) of the filtrate. Our results suggest that the antagonistic effects of VAR03-1 on Ti are mediated by large particle(s) released in the culture media.

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References

  • Benz J, Meinhart A (2014) Antibacterial effector/immunity systems: it’s just the tip of the iceberg. Curr Opin Microbiol 17:1–10

    Article  CAS  PubMed  Google Scholar 

  • Burr TJ, Otten L (1999) Crown gall of grape: biology and disease management. Annu Rev Phytopathol 37:53–80

    Article  CAS  PubMed  Google Scholar 

  • Burr TJ, Reid CL, Tagliati E, Bazzi C, Süle S (1997) Biological control of grape crown gall by strain f2/5 is not associated with agrocin production or competition for attachment sites on grape cells. Phytopathology 87:706–711

    Article  CAS  PubMed  Google Scholar 

  • Ghequire MG, De Mot R (2014) Ribosomally encoded antibacterial proteins and peptides from Pseudomonas. FEMS Microbiol Rev 38:523–568

    Article  CAS  PubMed  Google Scholar 

  • Ghequire MG, De Mot R (2015) The tailocin tale: peeling off phage tails. Trends Microbiol 23:587–590

    Article  CAS  PubMed  Google Scholar 

  • Gross H, Stockwell VO, Henkels MD, Nowak-Thompson B, Loper JE, Gerwick WH (2007) The genomisotopic approach: a systematic method to isolate products of orphan biosynthetic gene clusters. Chem Biol 14:53–63

    Article  CAS  PubMed  Google Scholar 

  • Haas D, Keel C (2003) Regulation of antibiotic production in root-colonizing Peudomonas spp. and relevance for biological control of plant disease. Annu Rev Phytopathol 41:117–153

    Article  CAS  PubMed  Google Scholar 

  • Hockett KL, Renner T, Baltrus DA (2015) Independent co-option of a tailed bacteriophage into a killing complex in Pseudomonas. mBio 6:e00452–e00415

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Kawaguchi A (2014) Reduction in pathogen populations at grapevine wound sites is associated with the mechanism underlying the biological control of crown gall by Rhizobium vitis strain ARK-1. Microbes Environ 29:296–302

    Article  PubMed  PubMed Central  Google Scholar 

  • Kawaguchi A (2015) Biological control agent Agrobacterium vitis strain ARK-1 suppresses expression of the virD2 and virE2 genes in tumorigenic A. vitis. Eur J Plant Pathol 143:789–799

    Article  CAS  Google Scholar 

  • Kawaguchi A, Inoue K (2012) New antagonistic strains of non-pathogenic Agrobacterium vitis to control grapevine crown gall. J Phytopath 160:509–518

    Article  Google Scholar 

  • Kawaguchi A, Inoue K, Nasu H (2005) Inhibition of crown gall formation by Agrobacterium radiobacter biovar 3 strains isolated from grapevine. J Gen Plant Pathol 71:422–430

    Article  Google Scholar 

  • Kawaguchi A, Inoue K, Nasu H (2007) Biological control of grapevine crown gall by nonpathogenic Agrobacterium vitis strain VAR03–1. J Gen Plant Pathol 73:133–138

    Article  Google Scholar 

  • Kawaguchi A, Inoue K, Ichinose Y (2008) Biological control of crown gall of grapevine, rose, and tomato by nonpathogenic Agrobacterium vitis strain VAR03-1. Phytopathology 98:1218–1225

    Article  CAS  PubMed  Google Scholar 

  • Kawaguchi A, Kondo K, Inoue K (2012) Biological control of apple crown gall by nonpathogenic Rhizobium vitis strain VAR03-1. J Gen Plant Pathol 78:287–293

    Article  Google Scholar 

  • Kerr A, Htay K (1974) Biological control of crown gall through bacteriocin production. Physiol Plant Pathol 4:37–40

    Article  CAS  Google Scholar 

  • Loper JE, Henkels MD, Shaffer BT, Valeriote FA, Gross H (2008) Isolation and identification of rhizoxin analogs from Pseudomonas fluorescens Pf-5 by using a genomic mining strategy. Appl Environ Microbiol 74:3085–3093

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Ma LS, Hachani A, Lin JS, Filloux A, Lai EM (2014) Agrobacterium tumefaciens deploys a superfamily of type VI secretion DNase effectors as weapons for interbacterial competition in planta. Cell Host Microbe 16:94–104

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • McCardell BA, Pootjes CF (1976) Chemical nature of agrocin 84 and its effect on a virulent strain of Agrobacterium tumefaciens. Antimicrob Agents Chemother 10:498–502

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Roberts WP, Tate ME, Kerr A (1977) Agrocin 84 is a 6-N-phosphoramidate of an adenine nucleotide analogue. Nature 265:379–381

    Article  CAS  PubMed  Google Scholar 

  • Schwechheimer C, Kuehn MJ (2015) Outer-membrane vesicles from Gram-negative bacteria: biogenesis and functions. Nat Rev Microbiol 13:605–619

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Takeuchi K, Noda N, Katayose Y, Mukai Y, Numa H, Yamada K, Someya N (2015) Rhizoxin analogs contribute to the biocontrol activity of a newly isolated Pseudomonas strain. Mol Plant Microbe Interact 28:333–342

    Article  CAS  PubMed  Google Scholar 

  • Thompson RJ, Hamilton RH, Pootjes CF (1979) Purification and characterization of agrocin 84. Antimicrob Agents Chemother 16:293–296

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Toyofuku M, Zhou S, Sawada I, Takaya N, Uchiyama H, Nomura N (2014) Membrane vesicle formation is associated with pyocin production under denitrifying conditions in Pseudomonas aeruginosa PAO1. Environ Microbiol 16:2927–2938

    Article  CAS  PubMed  Google Scholar 

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Acknowledgements

The bacterial strains were kindly provided by Okayama Prefecture in Japan via the dedicated arrangement of a material transfer agreement by Mr. Koji Tanina. This research was supported by KAKENHI Grant 17H03778 from the Ministry of Education, Culture, Sports, Science and Technology of Japan to A.K. and Y.N., and basic funds from Okayama University to Y.N. We also thank Honokai for providing a scholarship to K.S.

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Correspondence to Yoshiteru Noutoshi.

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Saito, K., Watanabe, M., Matsui, H. et al. Characterization of the suppressive effects of the biological control strain VAR03-1 of Rhizobium vitis on the virulence of tumorigenic R. vitis . J Gen Plant Pathol 84, 58–64 (2018). https://doi.org/10.1007/s10327-017-0756-1

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