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A genetic linkage map of Lens sp. based on microsatellite and AFLP markers and the localization of fusarium vascular wilt resistance

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Abstract

Microsatellites have currently become the markers of choice for molecular mapping and marker-assisted selection for key traits such as disease resistance in many crop species. We report here on the mapping of microsatellites which had been identified from a genomic library of lentil (Lens culinaris Medik.). The majority of microsatellite-bearing clones contained imperfect di-nucleotide repeats. A total of 41 microsatellite and 45 amplified fragment length polymorphism (AFLP) markers were mapped on 86 recombinant inbred lines derived from the cross ILL 5588 × L 692-16-1(s), which had been previously used for the construction of a random amplified polymorphic DNA and AFLP linkage map. Since ILL 5588 was resistant to fusarium vascular wilt caused by the fungus Fusarium oxysporum Shlecht. Emend. Snyder & Hansen f.sp. lentis Vasud. & Srini., the recombinant inbreds were segregating for this character. The resulting map contained 283 markers covering about 751 cM, with an average marker distance of 2.6 cM. The fusarium vascular wilt resistance was localized on linkage group 6, and this resistance gene was flanked by microsatellite marker SSR59-2B and AFLP marker p17m30710 at distances of 8.0 cM and 3.5 cM, respectively. These markers are the most closely linked ones known to date for this agronomically important Fw gene. Using the information obtained in this investigation, the development and mapping of microsatellite markers in the existing map of lentil could be substantially increased, thereby providing the possibility for the future localization of various loci of agronomic interest.

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Acknowledgements

A. Hamwieh was supported by the German Academic Exchange Service (DAAD) fellowship. The research of the ICARDA scientists was supported by grants from the German Federal Ministry of Economic Cooperation and Development (BMZ, Bonn, Germany) and the Arab Fund for Economic and Social Development (AFESD, Kuwait).

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Authors and Affiliations

  1. Institut für Pflanzenbau und Pflanzenzüchtung, Universität Kiel, Olshausenstrasse 40, Kiel, 24098, Germany

    A. Hamwieh, F. Dreyer & C. Jung

  2. International Centre for Agricultural Research in the Dry Areas (ICARDA), P.O. Box 5466, Aleppo, Syria

    A. Hamwieh, S. M. Udupa, W. Choumane, A. Sarker & M. Baum

  3. Faculty of Agriculture, Tishreen University, P.O. Box 2099, Lattakia, Syria

    W. Choumane

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  1. A. Hamwieh
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  2. S. M. Udupa
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  3. W. Choumane
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  4. A. Sarker
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  5. F. Dreyer
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  6. C. Jung
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  7. M. Baum
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Correspondence to M. Baum.

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Communicated by R. Hagemann

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Hamwieh, A., Udupa, S.M., Choumane, W. et al. A genetic linkage map of Lens sp. based on microsatellite and AFLP markers and the localization of fusarium vascular wilt resistance. Theor Appl Genet 110, 669–677 (2005). https://doi.org/10.1007/s00122-004-1892-5

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  • DOI: https://doi.org/10.1007/s00122-004-1892-5

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