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Isolation and molecular analysis of the maize P locus

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Summary

The maize P locus is involved in the synthesis of a red flavonoid pigment in the pericarp, cob and other floral tissues. The tissue-specific pattern of expression of certain P alleles suggests that P may be a complex locus, with more than one functional unit. The P-VV allele, which specifies variegated pericarp and variegated cob, however, shows that insertion and excision of the transposable element Ac affects both pericarp and cob expression as though cob and pericarp pigmentation are controlled by a single gene. Using Ac as a transposon tag, we have isolated 34 kb of genomic DNA from the P-VV and P-RR allele. The cloned DNA contains two 5.8 kb cross-hybridizing regions, in direct orientation relative to each other, separated by 6.6 kb of intervening DNA. A sequence motif of 250 by is repeated at three locations within the cloned region: once within each of the 5.8 kb repeats, and once outside the 5.8 kb repeats. DNA fragments flanking the Ac element detect five transcripts in RNA from wild type (P-RR) that are absent from mutant (P-VV) tissues. To localize the transcribed sequences, DNA probes spanning the 34 kb of cloned DNA were used in Northern analysis of RNA from mutant and wild-type kernels. The results suggest the presence of a single transcriptional unit located primarily within the DNA between the 5.8 kb repeats. The five RNAs transcribed from this region may be formed by alternative splicing. The size of the P gene derived from the length of the transcribed region seems much smaller than the gene size estimated from Ac-induced P-VV mutations.

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References

  • Anderson EG (1924) Pericarp studies in maize II. The allelomorphism of a series of factors for pericarp color. Genetics 9:442–445

    Google Scholar 

  • Barclay PC, Brink RA (1954) The relation between Modulator and Activator in maize. Proc Natl Acad Sci USA 40:1118–1126

    Google Scholar 

  • Behrens U, Fedoroff N, Laird A, Müller-Neumann M, Starlinger P, Yoder J (1984) Cloning of the Zea mays controlling element Ac from the wx-m7 allele. Mol Gen Genet 194:346–347

    Google Scholar 

  • Benton WD, Davis RW (1977) Screening lambda gt recombinant clones by hybridization to single plaque in situ. Science 196:180–182

    Google Scholar 

  • Bingham FM, Levis R, Rubin GM (1981) Cloning of DNA sequences from the white locus of Drosophila melanogaster by a novel and general method. Cell 25:693–704

    Google Scholar 

  • Bolivar F, Rodrigez RL, Green PJ, Betlach MC, Heynecker HL, Boyer HW, Crosa HJ, Falco S (1977) Construction and characterization of new cloning vehicles. Gene 2:95–113

    Google Scholar 

  • Brawn RI (1956) Effect of the P-VV allele in homozygous and heterozygous condition on mutation to red and light variegated pericarp in maize. Unpublished Ph.D. thesis, University of Wisconsin Library, Madison, USA

  • Brink RA (1957) A stable somatic mutation to colorless from variegated pericarp in maize. Genetics 43:435–447

    Google Scholar 

  • Brink RA, Styles D (1966) A collection of pericarp factors. Maize Coop News Lett 40:149–160

    Google Scholar 

  • Chen J, Greenblatt IM, Dellaporta SL (1987) Transposition of Ac from the P locus of maize into unreplicated chromosomal sites. Genetics 177:109–116

    Google Scholar 

  • Coe EH, Neuffer MG (1977) The genetics of corn. In: Sprague GF (ed) Corn and corn improvement. American Society of Agronomy, Madison, Wisconsin, USA, pp 111–223

    Google Scholar 

  • Dooner H, English J, Ralston EJ (1988) The frequency of transposition of the maize element Activator is not affected by an adjacent deletion. Mol Gen Genet 211:485–491

    Google Scholar 

  • Emerson RA (1917) Genetical studies of variegated pericarp in maize. Genetics 2:1–35

    Google Scholar 

  • Fedoroff N, Wessler S, Shure M (1983) Isolation of the transposable maize controlling element Ac and Ds. Cell 35:235–242

    Article  CAS  PubMed  Google Scholar 

  • Feinberg AP, Vogelstein B (1983) A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6–13

    CAS  PubMed  Google Scholar 

  • Frischauf AM, Lehrach H, Poustka A, Murray N (1983) Lambda replacement vectors carrying polylinker sequences. J Mol Biol 170:827–842

    Google Scholar 

  • Katamine S, Notario V, Durga Rao C, Miki T, Cheah MSC, Tronick SR, Robbins KC (1988) Primary Structure of the Human fgr Proto-Oncogene Product p55c− frg. Mol Cell Biol 8:259–266

    Google Scholar 

  • Kloppstech K, Schweiger G (1976) In vitro translation of poly A RNA from acetabularia. Cytobiologie 13:394–400

    Google Scholar 

  • Kunze R, Stochaj U, Laufs J, Starlinger P (1987) Transcription of transposable element Activator (Ac) of Zea mays (L.) EMBO J 6:1555–1563

    Google Scholar 

  • Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, New York

    Google Scholar 

  • McClelland M, Nelson M (1985) The effect of site specific methylation on restriction endonuclease digestion. Nucleic Acids Res 13:r201-r207

    Google Scholar 

  • Müller-Neumann M, Yoder J, Starlinger P (1984) The DNA sequence of the transposable element Ac of Zea mays (L.) Mol Gen Genet 198:19–24

    Google Scholar 

  • Murray NE (1983) Phage Lambda and Molecular Cloning. In: Hendrix RW, Roberts JW, Stahl FW, Weisberg SA (eds) Lambda II. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, pp 395–432

    Google Scholar 

  • Nevins JR, Darnell JE (1978) Steps in the processing of Ad2 mRNA: Poly(A)+ nuclear sequences are conserved and poly(A)+ addition precedes splicing. Cell 15:1477–1493

    Google Scholar 

  • Norrander J, Kempe T, Messing J (1983) Construction of inproved M13 vectors using oligodeoxynucleotide directed mutagensis. Gene 26:101–106

    Google Scholar 

  • Okamuro JK, Jofuku KD, Goldberg RB (1986) Soybean lectin gene and flanking nonseed protein gene are developmentally regulated in transformed tobacco plants. Proc Natl Acad Sci USA 83:8240–8244

    Google Scholar 

  • Peacock WJ, Dennis ES, Gerlach WL, Sachs MM, Schwartz D (1984) Insertion and excision of Ds controlling elements in maize. Cold Spring Harbor Symp Quant Biol 49:347–354

    Google Scholar 

  • Potter E, Nicolaisen K, Ong ES, Evans RM, Rosenfeld MG (1981) Thyrotropin releasing hormone exerts rapid nuclear effects to increase production of the primary prolactin mRNA transcript. Proc Natl Acad Sci USA 78:6662–6666

    Google Scholar 

  • Ruzdijic S, Pederson T (1987) Evidence for an association between U1 RNA and interspersed repeat single-copy RNAs in the cytoplasm of sea urchin eggs. Development 101:107–116

    Google Scholar 

  • Sachs MM, Peacock WJ, Dennis ES, Gerlach WL (1983) Maize Ac/Ds controlling elements a molecular viewpoint. Maydica 28:289–302

    Google Scholar 

  • Saedler H, Nevers P (1985) Transposition in plants: a molecular model. EMBO J 4:585–590

    Google Scholar 

  • Schwarz-Sommer ZS, Gierl A, Kloesgen RB, Wienand U, Peterson PA, Saedler H (1984) The Spm (En) transposable element controls the excision of a 2 kb DNA insert at the wx-m8 allele of Zea mays. EMBO J 3:1021–1028

    Google Scholar 

  • Schwarz-Sommer ZS, Shepherd N, Tacke E, Gierl A, Rohde W, Leclerq L, Mattes M, Berntgen R, Peterson PA, Saedler H (1987) Influence of transposable elements on the structure and function of the Al gene of Zea mays. EMBO J 6:287–294

    Google Scholar 

  • Spritz RA, Strunk K, Surowy CS, Hoch SO, Barton DE, Franke U (1987) The Human U1-70K snRNP protein: cDNA cloning, chromosomal localization, expression, alternative splicing and RNA-binding. Nucleic Acids Res 15:10373–10391

    Google Scholar 

  • Styles ED, Ceska O (1977) The genetic control of flavonoid biosynthesis in maize. Can J Genet Cyt 19:289–302

    Google Scholar 

  • Wessler SR, Baran G, Varagona M (1987) The maize transposable Ds is spliced from RNA. Science 237:916–918

    Google Scholar 

  • Wienand U, Saedler H (1987) Plant transposable elements: Unique structures for gene tagging and gene cloning. In: Hohn T, Schell J (eds) Plant DNA infectious agents. Springer Verlag, Berlin, New York, pp 205–227

    Google Scholar 

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Communicated by H. Saedler

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Lechelt, C., Peterson, T., Laird, A. et al. Isolation and molecular analysis of the maize P locus. Molec. Gen. Genet. 219, 225–234 (1989). https://doi.org/10.1007/BF00261181

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