Skip to main content

Role of Endophytes in Plant Disease Management

  • Chapter
  • First Online:
Emerging Trends in Plant Pathology

Abstract

Sustainable agriculture and agri-food production can only be preserved for our next generation by protecting different natural resources. So a thrust interest has been developed to exploit internal colonisation of healthy plants that termed as endophytes to execute in a systemic way against plant disease management. The matter in this chapter is to have an impact on economic and environment by limiting substantial side effects of abiotic and biotic factors by immediately protecting them by living organisms, i.e. endophytes within the plant tissues. The future implication of combinations of endophyte with commercial pesticide both as seed and seedling treatment could have a synergistic effect against multiple disease resistance under changing climate scenario.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 219.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 279.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 279.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  • Ait BE, Nowak J, Clement C (2006) Enhancement of chilling resistance of inoculated grapevine plantlets with a plant growth-promoting rhizobacterium, Burkholderia phytofirmans strain PsJN. Appl Environ Microbiol 72:7246–7252

    Article  CAS  Google Scholar 

  • Araujo WL, Marcon J, Maccheroni W Jr, Van Elsas JD, Van Vuurde JWL, Azevedo JL (2002) Diversity of endophytic bacterial populations and their interaction with Xylella fastidiosa in citrus plants. Appl Environ Microbiol 68:4906–4914

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Arora NK, Khare E, Naraian R, Maheshwari DK (2008) Sawdust as a superior carrier for production of multipurpose bioinoculant using plant growth promoting rhizobial and pseudomonad strains and their impact on productivity of Trifolium repense. Curr Sci 95:90

    Google Scholar 

  • Atmosukarto I, Castillo U, Hess WM, Sears J, Strobel G (2005) Isolation and characterization of Muscodor albus I-41.3s, a volatile antibiotic producing fungus. Plant Sci 169:854–861

    Article  CAS  Google Scholar 

  • Azevedo JL, Maccheroni W Jr, Pereira JO, de Araújo WL (2000) Endophytic microorganisms: a review on insect control and recent advances on tropical plants. Electron J Biotechnol 3:15–16

    Article  Google Scholar 

  • Babu GA, Shea PJ, Sudhakar D, Jung IB, Oh BT (2015) Potential use of Pseudomonas koreensis AGB-1 in association with Miscanthus sinensis to remediate heavy metal(loid)-contaminated mining site soil. J Environ Manag 151:160–166

    Google Scholar 

  • Barac T, Taghavi S, Borremans B, Provoost A, Oeyen L, Colpaert JV, Vangronsveld J, van der Lelie D (2004) Engineered endophytic bacteria improve phyto-remediation of water-soluble, volatile, organic pollutants. Nat Biotechnol 22:583–588

    Article  CAS  PubMed  Google Scholar 

  • Barka EA, Vatsa P, Sanchez L, Gaveau-Vaillant N, Jacquard C, Klenk HP, Clément C, Ouhdouch Y, van Wezel GP (2016) Taxonomy, physiology, and natural products of Actinobacteria. Microbiol Mol Biol Rev 80:1–43

    Article  PubMed  Google Scholar 

  • Barrow JR (2003) A typical morphology of dark septate fungal root endophytes of Bouteloua in arid south western USA range lands. Mycorrhiza 3:239–247

    Article  Google Scholar 

  • Bary A (1866) Morphologie und physiologie der pilze, flechten und myxomyceten. Leipzig

    Google Scholar 

  • Bashan Y (1998) Inoculants of plant growth promoting bacteria for use in agriculture. Biotechnol Adv 16:729–770

    Article  CAS  Google Scholar 

  • Bashyal B, Li JY, Strobel GA, Hess WM (1999) Seimatoantlerium nepalense, an endophytic taxol producing coelomycete from Himalayan yew (Taxus wallachiana). Mycotaxon 72:33–42

    Google Scholar 

  • Bazilah ABI, Sariah M, Zainal Abidin MA, Yasmeen S (2011) Effect of carrier and temperature on the viability of Burkholderia sp. (UPMB3) and Pseudomonas sp. (UPMP3) during storage. Int J Agric Biol 13:198–202

    Google Scholar 

  • Beck HC, Hansen AM, Lauritsen FR (2003) Novel pyrazine metabolites found in polymyxin biosynthesis by Paenibacillus polymyxa. FEMS Microbiol Lett 220:67–73

    Article  CAS  PubMed  Google Scholar 

  • Benhamou N, Chet I (1997) Cellular and molecular mechanisms involved in the interaction between Trichoderma harzianum and Pythium ultimum. Appl Environ Microbiol 63:2095–2099

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Bérdy J (2012) Thoughts and facts about antibiotics: where we are now and where we are heading. J Antibiot 65:385

    Article  CAS  Google Scholar 

  • Bischoff KM, Wicklow DT, Jordan DB, de Rezende ST, Liu SQ, Hughes SR, Rich JO (2009) Extracellular hemicellulolytic enzymes from the maize endophyte Acremonium zeae. Curr Microbiol 58:499–503

    Article  CAS  PubMed  Google Scholar 

  • Bolton MD (2009) Primary metabolism and plant defense fuel for the fire. Mol Plant-Microbe Interact 22:487–497

    Article  CAS  PubMed  Google Scholar 

  • Bourgaud F, Gravot A, Milesi S, Gontier E (2001) Production of plant secondary metabolites: a historical perspective. Plant Sci 161:839851

    Article  Google Scholar 

  • Campbell BG, Thompson JA (1996) 1-Aminocyclopropane1-carboxylate deaminase genes from Pseudomonas strains. FEMS Microbiol Lett 138:207–210

    Article  CAS  PubMed  Google Scholar 

  • Castillo UF, Strobel GA, Ford EJ, Hess WM, Porter H, Jensen JB, Albert H, Robison R, Condron MA, Teplow DB, Stevens D (2002) Munumbicins, wide-spectrum antibiotics produced by Streptomyces NRRL 30562, endophytic on Kennedia nigriscansa. Microbiology 148:2675–2685

    Article  CAS  PubMed  Google Scholar 

  • Castillo U, Harper JK, Strobel GA, Sears J, Alesi K, Ford E, Lin J, Hunter M, Maranta M, Ge H, Yaver D (2003) Kakadumycins, novel antibiotics from Streptomyces sp. NRRL 30566, an endophyte of Grevillea pteridifolia. FEMS Microbiol Lett 224:183–190

    Article  CAS  PubMed  Google Scholar 

  • Chaudhary HS, Soni B, Shrivastava AR, Shrivastava S (2013) Diversity and versatility of actinomycetes and its role in antibiotic production. J Appl Pharm Sci 3:S83–S94

    Google Scholar 

  • Cohen AC, Travaglia CN, Bottini R, Piccoli PN (2009) Participation of abscisic acid and gibberellins produced by endophytic Azospirillum in the alleviation of drought effects in maize. Botany 87:455–462

    Article  CAS  Google Scholar 

  • Czarny JC, Grichko VP, Glick BR (2006) Genetic modulation of ethylene biosynthesis and signaling in plants. Biotechnol Adv 24:410–419

    Article  CAS  PubMed  Google Scholar 

  • Daft GC, Leben C (1972) Bacterial blight of soybeans: epidemiology of blight outbreaks. Phytopathology 62

    Google Scholar 

  • Dai CC, Yu BY, Li X (2008) Screening of endophytic fungi that promote the growth of Euphorbia pekinensis. Afr J Biotechnol 7:3505–3509

    CAS  Google Scholar 

  • Dingle J, Mcgee PA (2003) Some endophytic fungi reduce the density of pustules of Puccinia recondita f. sp. tritici in wheat. Mycol Res 107:310–316

    Article  PubMed  Google Scholar 

  • Ezra D, Castillo UF, Strobel GA, Hess WM, Porter H, Jensen JB, Condron MA, Teplow DB, Sears J, Maranta M, Hunter M (2004) Coronamycins, peptide antibiotics produced by a verticillate Streptomyces sp. (MSU-2110) endophytic on Monstera sp. Microbiology 150:785–793

    Article  CAS  PubMed  Google Scholar 

  • Faeth SH, Fagan WF (2002) Fungal endophytes: common host plant symbionts but uncommon mutualists. Integr Comp Biol 42:360–368

    Article  PubMed  Google Scholar 

  • Fernandez O, Theocharis A, Bordiec S, Feil R, Jacquens L, Clement C, Fontaine F, Barka EA (2012) Burkholderia phytofirmans PsJN acclimates grapevine to cold by modulating carbohydrate metabolism. Mol Plant-Microbe Interact 25:496–504

    Article  CAS  PubMed  Google Scholar 

  • Foley JA, Defries R, Asner GP, Barford C, Bonan G, Carpenter SR, Chapin FS, Coe MT, Daily GC, Gibbs HK, Helkowski JH, Holloway T, Howard EA, Kucharik CJ, Monfreda C, Patz JA, Prentice IC, Ramankutty N, Snyder PK (2005) Global consequences of land use. Science 309:570–574

    Article  CAS  PubMed  Google Scholar 

  • Fravel DR. (1988) Role of antibiosis in the biocontrol of plant diseases. Annu Rev Phytopathol 75–91

    Google Scholar 

  • Gagné S, Richard C, Rousseau H, Antoun H (1987) Xylem-residing bacteria in alfalfa roots. Can J Microbiol 33:996–1000

    Article  Google Scholar 

  • Gangadevi V, Muthumary J (2008a) Taxol, an anticancer drug produced by an endophytic fungus Bartalinia robillardoides Tassi, isolated from a medicinal plant, Aegle marmelos Correa ex Roxb. World J Microbiol Biotechnol 24:717–724

    Article  CAS  Google Scholar 

  • Gangadevi V, Muthumary J (2008b) Isolation of Colletotrichum gloeosporioides, a novel endophytic taxol-producing fungus from the leaves of a medicinal plant, Justicia gendarussa. Mycol Balc 5:1–4

    Google Scholar 

  • Gangwar M, Dogra S, Gupta UP, Kharwar RN (2014) Diversity and biopotential of endophytic actinomycetes from three medicinal plants in India. Afr J Microbiol Res 8:184–191

    Article  CAS  Google Scholar 

  • Gayathri P, Muralikrishnan V (2013) Isolation and characterization of endophytic actinomycetes from mangrove plant for antimicrobial activity. Int J Curr Microbiol Appl Sci 2:78–89

    Google Scholar 

  • Germaine K, Keogh E, Garcia-Cabellos G, Borremans B, Lelie D, Barac T, Oeyen L, Vangronsveld J, Moore FP, Moore ERB, Campbell CD, Ryan D, Dowling DN (2004) Colonisation of poplar trees by gfp expressing bacterial endophytes. FEMS Microbiol Ecol 48:109–118

    Article  CAS  PubMed  Google Scholar 

  • Germaine K, Liu X, Cabellos G, Hogan J, Ryan D, Dowling DN (2006) Bacterial endophyte-enhanced phyto-remediation of the organochlorine herbicide 2,4-dichlorophenoxyacetic acid. FEMS Microbiol Ecol 57:302–310

    Article  CAS  PubMed  Google Scholar 

  • Giménez C, Cabrera R, Reina M, González Coloma A (2007) Fungal endophytes and their role in plant protection. Curr Org Chem 11:707–720

    Article  Google Scholar 

  • Glick BR (2014) Bacteria with ACC deaminase can promote plant growth and help to feed the world. Microbiol Res 169:30–39

    Article  CAS  PubMed  Google Scholar 

  • Golinska P, Wypij M, Agarkar G, Rathod D, Dahm H, Rai M (2015) Endophytic actinobacteria of medicinal plants: diversity and bioactivity. Antonie Van Leeuwenhoek 108:267–289

    Article  PubMed  PubMed Central  Google Scholar 

  • Griffin MR (2007) Beauveria bassiana, a cotton endophyte with biocontrol activity against seedling disease. PhD Dissertation. The University of Tennessee, Knoxville, TN, USA

    Google Scholar 

  • Guan SH, Sattler I, Lin WH, Guo DA, Grabley S (2005) P-Aminoacetophenonic acids produced by a mangrove endophyte: Streptomyces griseus subspecies. J Nat Prod 68:1198–1200

    Article  CAS  PubMed  Google Scholar 

  • Gunatilaka AAL (2006) Natural products from plant-associated microorganisms: distribution, structural diversity, bioactivity, and implications of their occurrence. J Nat Prod 69:509–526

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Guo B, Dai JR, Ng S, Huang Y, Leong C, Ong W, Carte BK (2000) Cytonic acids A and B: novel tridepside inhibitors of hCMV protease from the endophytic fungus Cytonaema species. J Nat Prod 63:602–604

    Article  CAS  PubMed  Google Scholar 

  • Hallmann J, Quadt-Hallmann A, Mahaffee WF, Kloepper JW (1997) Bacterial endophytes in agricultural crops. Can J Microbiol 43:895–914

    Article  CAS  Google Scholar 

  • Harman GE, Howell CR, Viterbo A, Chet I, Lorito M (2004) Trichoderma species – opportunistic, avirulent plant symbionts. Nat Rev Microbiol 2:43

    Article  CAS  PubMed  Google Scholar 

  • Hellwig V, Grothe T, Mayer-Bartschmid A, Endermann R, Geschke FU, Henkel T, Stadler MA (2002) Altersetin, a new antibiotic from cultures of endophytic Alternaria spp. taxonomy, fermentation, isolation, structure elucidation and biological activities. J Antibiot 55:881–892

    Article  CAS  Google Scholar 

  • Herrera-Carillo Z, Torres MS, Singh AP, Vorsa N, Gianfagna T, Meyer W, White Jr JF. (2009) Phenolic, flavonoid and antioxidant profiling for cool-season grasses with and without endophyte. In: Proceedings of the 18th annual Rutgers Turfgrass symposium, vol 12

    Google Scholar 

  • Hoffman MT, Gunatilaka MK, Wijeratne K, Gunatilaka L, Arnold AE (2013) Endohyphal bacterium enhances production of indole-3-acetic acid by a foliar fungal endophyte. PLoS One 8:e73132

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Hurek T, Reinhold-Hurek B, Van Montagu M, Kellenberger E (1994) Root colonization and systemic spreading of Azoarcus sp. strain BH72 in grasses. J Bacteriol 176:1913–1923

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Ibrahim SR, Elkhayat ES, Mohamed GA, Khedr AI, Fouad MA, Kotb MH, Ross SA (2015) Aspernolides F and G, new butyrolactones from the endophytic fungus Aspergillus terreus. Phytochem Lett 14:84–90

    Article  CAS  Google Scholar 

  • Inahashi Y, Iwatsuki M, Ishiyama A, Namatame M, Nishihara-Tsukashima A, Matsumoto A, Hirose T, Sunazuka T, Yamada H, Otoguro K, Takahashi Y (2011) Spoxazomicins A–C, novel antitrypanosomal alkaloids produced by an endophytic actinomycete, Streptosporangium oxazolinicum K07-0460 T. J Antibiot 64:303

    Article  CAS  Google Scholar 

  • Istifadah N, Mcgee PA (2006) Endophytic Chaetomium globosum reduces development of tan spot in wheat caused by Pyrenophora tritici-repentis. Australas Plant Pathol 35:411–418

    Article  Google Scholar 

  • Jalgaonwala RE, Mohite BV, Mahajan RT (2011) A review: natural products from plant associated endophytic fungi. J Microbiol Biotechnol Res 1:21–32

    Google Scholar 

  • Jha Y, Subramanian RB, Patel S (2011) Combination of endophytic and rhizospheric plant growth promoting rhizobacteria in Oryza sativa shows higher accumulation of osmoprotectant against saline stress. Acta Physiol Plant 33:797–802

    Article  Google Scholar 

  • Jha PN, Gupta G, Jha P, Mehrotra R (2013) Association of rhizospheric/endophytic bacteria with plants: a potential gateway to sustainable agriculture. Greener J Agric Sci 3:73–84

    Google Scholar 

  • Jogawat A, Vadassery J, Verma N, Oelmüller R, Dua M, Nevo E, Johri AK (2016) PiHOG1, a stress regulator MAP kinase from the root endophyte fungus Piriformospora indica, confers salinity stress tolerance in rice plants. Sci Rep 6:36765

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Jordaan A, Taylor JE, Rossenkhan R (2006) Occurrence and possible role of endophytic fungi associated with seed pods of Colophospermum mopane (Fabaceae) in Botswana. S Afr J Bot 72:245–255

    Article  Google Scholar 

  • Jouda JB, Mawabo IK, Notedji A, Mbazoa CD, Nkenfou J, Wandji J, Nkenfou CN (2016) Anti-mycobacterial activity of polyketides from Penicillium sp. endophyte isolated from Garcinia nobilis against Mycobacterium smegmatis. Int J Mycobacteriol 5:192–196

    Article  PubMed  Google Scholar 

  • Jumpponen ARI, Trappe JM (1998) Dark septate endophytes: a review of facultative biotrophic root-colonizing fungi. New Phytol 140:295–310

    Article  PubMed  Google Scholar 

  • Karthikeyan B, Joe MM, Islam R, Sa T (2012) ACC deaminase containing diazotrophic endophytic bacteria ameliorate salt stress in Catharanthus roseus through reduced ethylene levels and induction of antioxidative defense systems. Symbiosis 56:77–86

    Article  CAS  Google Scholar 

  • Kavroulakis NS, Zervakis GI, Ehaliotis C, Haralampidis K, Papadopoulou KK (2007) Role of ethylene in the protection of tomato plants against soil-borne fungal pathogens conferred by an endophytic Fusarium solani strain. J Exp Bot 58:3853–3864

    Article  CAS  PubMed  Google Scholar 

  • Kim S, Shin DS, Lee T, Oh KB (2004) Periconicins, two new fusicoccane diterpenes produced by an endophytic fungus Periconia sp. with antibacterial activity. J Nat Prod 67:448–450

    Article  CAS  PubMed  Google Scholar 

  • Kloepper JW, Ryu CM (2006) Bacterial endophytes as elicitors of induced systemic resistance. In: Boyle CJ, Schulz B, Sieber T (eds) Microbial root endophytes. Springer, Berlin/Heidelberg, pp 33–52

    Chapter  Google Scholar 

  • Kobayashi DY, Palumbo JD (2000) Bacterial endophytes and their effects on plants and uses in agriculture. In: Bacon CW, White JF (eds) Microbial endophytes. Dekker, New York, pp 199–236

    Google Scholar 

  • Kour A, Shawl AS, Rehman S, Qazi PH, Sudan P, Khajuria RK, Sultan P, Verma V (2008) Isolation and identification of an endophytic strain of Fusarium oxysporum producing podophyllotoxin from Juniperus recurva. World J Microbiol Biotechnol 24:1115–1121

    Article  CAS  Google Scholar 

  • Krings M, Taylor TN, Hass H, Kerp H, Dotzler N, Hermsen EJ (2007) Fungal endophytes in a 400-million-yr-old land plant: infection pathways, spatial distribution, and host responses. New Phytol 174:648–657

    Article  PubMed  Google Scholar 

  • Kudanga T, Mwenje E (2005) Extracellular cellulase production by tropical isolates of Aureobasidium pullulans. Can J Microbiol 51:773–776

    Article  CAS  PubMed  Google Scholar 

  • Kuldau G, Bacon C (2008) Clavicipitaceous endophytes: their ability to enhance resistance of grasses to multiple stresses. Biol Control 46:57–71

    Article  Google Scholar 

  • Kumar V, Sarma MVRK, Saharan K, Srivastava R, Kumar L, Sahai V, Bisaria VS, Sharma AK (2012) Effect of formulated root endophytic fungus Piriformospora indica and plant growth promoting rhizobacteria fluorescent pseudomonads R62 and R81 on Vigna mungo. World J Microbiol Biotechnol 28:595–603

    Article  PubMed  Google Scholar 

  • Kusari S, Lamshöft M, Zühlke S, Spiteller M (2008) An endophytic fungus from Hypericum perforatum that produces hypericin. J Nat Prod 71:159–162

    Article  CAS  PubMed  Google Scholar 

  • Kusari S, Zühlke S, Spiteller M (2011) Effect of artificial reconstitution of the interaction between the plant Camptotheca acuminata and the fungal endophyte Fusarium solani on camptothecin biosynthesis. J Nat Prod 74:764–775

    Article  CAS  PubMed  Google Scholar 

  • Kusari S, Verma VC, Lamshoefft M, Spiteller M (2012) An endophytic fungus from Azadirachta indica A. Juss. That produces azadirachtin. World J Microbiol Biotechhnol 28(3):1287–1294

    Google Scholar 

  • Lazarovits G, Nowak J (1997) Rhizobacteria for improvement of plant growth and establishment. HortScience 32:188–192

    Article  Google Scholar 

  • Lee K, Pan JJ, May G (2009) Endophytic Fusarium verticillioides reduces disease severity caused by Ustilago maydis on maize. FEMS Microbiol Lett 299:31–37

    Article  CAS  PubMed  Google Scholar 

  • Lehtonen PT, Helander M, Siddiqui SA, Lehto K, Saikkonen K (2006) Endophytic fungus decreases plant virus infections in meadow ryegrass (Lolium pratense). Biol Lett 2:620–623

    Article  PubMed  PubMed Central  Google Scholar 

  • Liu CH, Zou WX, Lu H, Tan RX (2001) Antifungal activity of Artemisia annua endophyte cultures against phytopathogenic fungi. J Biotechnol 88:277–282

    Article  CAS  PubMed  Google Scholar 

  • Liu L, Liu SC, Chen XL, Guo LD, Che YS (2009) Pestalofones A-E, bioactive cyclohexanone derivatives from the plant endophytic fungus Pestalotiopsis fici. Bioorg Med Chem 17:606–613

    Article  CAS  PubMed  Google Scholar 

  • Lu H, Zou WX, Meng JC, Hu J, Tan RX (2000) New bioactive metabolites produced by Colletotrichum sp., an endophytic fungus in Artemisia annua. Plant Sci 151:67–73

    Article  CAS  Google Scholar 

  • Ma Y, Rajkumar M, Freitas H (2009) Inoculation of plant growth promoting bacterium Achromobacter xylosoxidans strain Ax10 for the improvement of copper phytoextraction by Brassica juncea. J Environ Manag 90:831–837

    Article  Google Scholar 

  • Macagnan D, Romeiro RS, Pomella AWV, deSouza JT (2008) Production of lytic enzymes and siderophores, and inhibition of germination of basidiospores of Moniliophthora (ex Crinipellis) perniciosa by phylloplane actinomycetes. Biol Control 47:309–314

    Article  CAS  Google Scholar 

  • Macia-Vicente JG, Jansson HB, Talbot NJ, Lopez-Llorca LV (2009) Real-time PCR quantification and live-cell imaging of endophytic colonization of barley (Hordeum vulgare) roots by Fusarium equiseti and Pochonia chlamydosporia. New Phytol 182:213–228

    Article  CAS  PubMed  Google Scholar 

  • Mahapatra S, Rayanoothala P, Solanki MK, Das S (2020) Wheat microbiome: present status and future perspective. In: Solanki M, Kashyap P, Kumari B (eds) Phytobiomes: current insights and future vistas. Springer, Singapore. https://doi.org/10.1007/978-981-15-3151-4_8

  • Malfanova N, Lugtenberg BJ, Berg G (2013) Bacterial endophytes: who and where, and what are they doing there. Mol Microbial Ecol Rhizosphere 1:2

    Google Scholar 

  • Malinowski DP, Zuo H, Belesky DP, Alloush GA (2004) Evidence for copper binding by extracellular root exudates of tall fescue but not perennial ryegrass infected with Neotyphodium spp. endophytes. Plant Soil 267:1–12

    Article  CAS  Google Scholar 

  • Mannisto MK, Tiirola MA, Puhakka JA (2001) Degradation of 2,3,4,6-tetrachlorophenol at low temperature and low dioxygen concentrations by phylogenetically different groundwater and bioreactor bacteria. Biodegradation 12:291–301

    Article  CAS  PubMed  Google Scholar 

  • Márquez LM, Redman RS, Rodriguez RJ, Roossinck MJ (2007) A virus in a fungus in a plant: three-way symbiosis required for thermal tolerance. Science 315:513–515

    Article  PubMed  CAS  Google Scholar 

  • Marshall D, Tunali B, Nelson LR (1999) Occurrence of fungal endophytes in species of wild Triticum. Crop Sci 39:1507–1512

    Article  Google Scholar 

  • Mejıa LC, Rojas EI, Maynard Z, Bael SV, Elizabeth Arnold A, Hebbar P, Samuels GJ, Robbins N, Herre EA (2008) Endophytic fungi as biocontrol agents of Theobroma cacao pathogens. Biol Control 46:4–14

    Article  Google Scholar 

  • Miller CM, Miller RV, Garton-Kenny D, Redgrave B, Sears J, Condron MM, Teplow DB, Strobel GA (1998) Ecomycins, unique antimycotics from Pseudomonas viridiflava. J Appl Microbiol 84:937–944

    Article  CAS  PubMed  Google Scholar 

  • Naveed M, Hussain MB, Zahir ZA, Mitter B, Sessitsch A (2014) Drought stress amelioration in wheat through inoculation with Burkholderia phytofirmans strain PsJN. Plant Growth Regul 73:121–131

    Article  CAS  Google Scholar 

  • Nuangmek W, McKenzie EHC, Lumyong S (2008) Endophytic fungi from wild banana (Musa acuminata Colla.) works against anthracnose disease caused by Colletotrichum musae. Res J Microbiol 3:358–374

    Google Scholar 

  • Oses R, Valenzuela S, Freer J, Baeza J, Rodriguez J (2006) Evaluation of fungal endophytes for lignocellulolytic enzyme production and wood biodegradation. Int Biodeterior Biodegrad 57:129–135

    Article  CAS  Google Scholar 

  • Pal KK, Gardener BM. (2006) Biological control of plant pathogens

    Google Scholar 

  • Pandey V, Ansari MW, Tula S, Yadav S, Sahoo RK, Shukla N, Bains G, Badal S, Chandra S, Gaur AK, Kumar A (2016) Dose-dependent response of Trichoderma harzianum in improving drought tolerance in rice genotypes. Planta 243:1251–1264

    Article  CAS  PubMed  Google Scholar 

  • Petrini O (1991) Fungal endophytes of tree leaves. In: Microbial ecology of leaves. Springer, New York, pp 179–197

    Chapter  Google Scholar 

  • Petrini O, Dreyfuss MM (1981) Endophytische Pilze in epiphyischen Araceae, Bromeliaceae und Orchidaceae. Sydowia 34:135–148

    Google Scholar 

  • Pirttilä AM, Joensuu P, Pospiech H, Jalonen J, Hohtola A (2004) Bud endophytes of scots pine produce adenine derivatives and other compounds that affect morphology and mitigate browning of callus cultures. Physiol Plant 121:305–312

    Article  PubMed  Google Scholar 

  • Porteous-Moore F, Barac T, Borremans B, Oeyen L, Vangronsveld J, van der Lelie D, Campbell D, Moore ERB (2006) Endophytic bacterial diversity in poplar trees growing on a BTEX-contaminated site: the characterisation of isolates with potential to enhance phytoremediation. Syst Appl Microbiol 29:539–556

    Article  CAS  Google Scholar 

  • Prathuangwong S, Dusit A, Wilawan C, Tiyakhon C, Natthiya B (2013) Bioformulation Pseudomonas fluorescens SP007s against dirty panicle disease of rice. Afr J Microbiol Res 7:5274–5283

    Article  CAS  Google Scholar 

  • Priti V, Ramesha BT, Singh S, Ravikanth G, Ganeshaiah KN, Suryanarayanan TS, Shaanker RU (2009) How promising are endophytic fungi as alternative sources of plant secondary metabolites. Curr Sci 97:477–478

    Google Scholar 

  • Redman RS, Freeman S, Clifton DR, Morrel J, Brown G, Rodriguez RJ (1999) Biochemical analysis of plant protection afforded by a nonpathogenic endophytic mutant of Colletotrichum magna. Plant Physiol 119:795–804

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Redman RS, Sheehan KB, Stout RG, Rodriguez RJ, Henson JM (2002) Thermotolerance generated by plant/fungal symbiosis. Science 298:1581–1581

    Article  CAS  PubMed  Google Scholar 

  • Ren Y, Strobel GA, Graff JC, Jutila M, Park SG, Gosh S, Teplow D, Condron M, Pang E, Hess WM, Moore E (2008) Colutellin A, an immunosuppressive peptide from Colletotrichum dematium. Microbiology 154:1973–1979

    Article  CAS  PubMed  Google Scholar 

  • Rivera-Varas VV, Freeman TA, Gudmestad NC, Secor GA (2007) Mycoparasitism of Helminthosporium solani by Acremonium strictum. Phytopathology 97:1331–1337

    Article  PubMed  Google Scholar 

  • Rodriguez RJ, Henson J, Van Volkenburgh E, Hoy M, Wright L, Beckwith F, Kim Y, Redman RS (2008) Stress tolerance in plants via habitat-adapted symbiosis. ISME J 2:404–416

    Article  PubMed  Google Scholar 

  • Rodriguez RJ, White JF Jr, Arnold AE, Redman ARA (2009) Fungal endophytes: diversity and functional roles. New Phytol 182:314–330

    Article  CAS  PubMed  Google Scholar 

  • Romo M, Leuchtmann A, García B, Zabalgogeazcoa I (2007) A totivirus infecting the mutualistic fungal endophyte Epichloë festucae. Virus Res 124:38–43

    Article  CAS  PubMed  Google Scholar 

  • Roos IM, Hattingh MJ (1983) Scanning electron microscopy of Pseudomonas syringae pv, morsprunorum on sweet cherry leaves. J Phytopathol 108:18–25

    Article  Google Scholar 

  • Rosen HR (1936) Mode of penetration and of progressive invasion of fire-blight bacteria into apple and pear blossoms. Arkansas Agric Exp Sta Bull 331:1–68

    Google Scholar 

  • Rosenblueth M, Martínez-Romero E (2004) Rhizobium etli maize populations and their competitiveness for root colonization. Arch Microbiol 181:337–344

    Article  CAS  PubMed  Google Scholar 

  • Ryu CM, Farag MA, Hu CH, Reddy MS, Wei HX, Pare PW, Kloepper JW (2003) Bacterial volatiles promote growth in Arabidopsis. Proc Natl Acad Sci USA 100:4927–4932

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Saar DE, Polans NO, Sørensen PD, Duvall MR (2001) Angiosperm DNA contamination by endophytic fungi: detection and methods of avoidance. Plant Mol Biol Rep 19:249–260

    Article  CAS  Google Scholar 

  • Sah A, Negi H, Kapri A, Anwar S, Goel R (2011) Comparative shelf life and efficacy of LDPE and PVC degrading bacterial consortia under bioformulations. Ekologija 57:55–61

    Article  CAS  Google Scholar 

  • Saikkonen K, Saari S, Helander M (2010) Defensive mutualism between plants and endophytic fungi? Fungal Divers 41:101–113

    Article  Google Scholar 

  • Sallam Nashwa M, Riad Shaimaa N, Mohamed MS, Seef Eleslam A (2013) Formulations of Bacillus spp and Pseudomonas fluorescens for biocontrol of cantaloupe root rot caused by Fusarium solani. J Plant Prot Res 53:275–300

    CAS  Google Scholar 

  • Sallam Nashwa M, Riad Shaimaa N, Mohamed MS, Seef EA (2014) Biocontrol of cantaloupe damping-off disease caused by Fusarium semitectum by using formulations of antagonistic fungi. J Phytopathol Pest Manag 1:5–15

    Google Scholar 

  • Sánchez Márquez M, Bills GF, Zabalgogeazcoa I (2007) The endophytic mycobiota of the grass Dactylis glomerata

    Google Scholar 

  • Schulz B, Boyle C (2006) What are endophytes? In: Microbial root endophytes. Springer, Berlin/Heidelberg, pp 1–13

    Chapter  Google Scholar 

  • Serfling A, Wirsel SGR, Lind V, Deising HB (2007) Performance of the biocontrol fungus Piriformospora indica on wheat under greenhouse and field conditions. Phytopathology 97:523–531

    Article  CAS  PubMed  Google Scholar 

  • Shanmugam V, Kanoujia N, Singh M, Singh S, Prasad R (2011) Biocontrol of vascular wilt and corm rot of gladiolus caused by Fusarium oxysporum f. sp. gladioli using plant growth promoting rhizobacterial mixture. Crop Prot 30:807–813

    Article  Google Scholar 

  • Siciliano SD, Goldie H, Germida JJ (1998) Enzymatic activity in root exudates of dahurian wild rye (Elymus dauricus) that degrades 2-chlorobenzoic acid. J Agric Food Chem 46:5–7

    Article  CAS  PubMed  Google Scholar 

  • Silva GH, Teles HL, Zanardi LM, Marx Young MC, Eberlin MN, Hadad R, Pfenning LH, Costa-Neto CM, Castro-Gamboa I, Bolzani YS, Araújo AR (2006) Cadinane sesquiterpenoids of Phomopsis cassiae, an endophytic fungus associated with Cassia spectabilis (Leguminosae). Phytochemistry 67:1964–1969

    Article  CAS  PubMed  Google Scholar 

  • Singh R, Dubey AK (2015) Endophytic actinomycetes as emerging source for therapeutic compounds. Indo Glob J Pharm Sci 5:106–116

    Article  CAS  Google Scholar 

  • Singh JS, Pandey VC, Singh DP (2011) Efficient soil microorganisms: a new dimension for sustainable agriculture and environmental development. Agric Ecosyst Environ 140:339–353

    Article  Google Scholar 

  • Smith CJ (1996) Accumulation of phytoalexins: defense mechanism and stimulus response system. New Phytol 32:1–45

    Article  CAS  Google Scholar 

  • Smith JA, Métraux JP (1991) Pseudomonas syringae pv. syringae induces systemic resistance to Pyricularia oryzae in rice. Physiol Mol Plant Pathol 39:451–461

    Article  Google Scholar 

  • Srivastava S, Verma PC, Chaudhry V, Singh N, Abhilash PC, Kumar KV, Sharma N, Singh N (2013) Influence of inoculation of arsenic-resistant Staphylococcus arlettae on growth and arsenic uptake in Brassica juncea (L.) Czern. Var. R-46. J Hazard Mater 262:1039–1047

    Google Scholar 

  • Stierle A, Stobel G (1995) The search for a taxol-producing microorganism among the endophytic fungi of the pacific yew, Taxus brevifolia. J Nat Prod 58:1315–1324

    Article  CAS  PubMed  Google Scholar 

  • Stierle A, Strobel GA, Stierle D (1993) Taxol and taxane production by Taxomyces andreanae, an endophytic fungus of Pacific yew. Science 260:214–216

    Article  CAS  PubMed  Google Scholar 

  • Strobel G, Daisy B, Castillo U, Harper J (2004) Natural products from endophytic microorganisms. J Nat Prod 67:257–268

    Article  CAS  PubMed  Google Scholar 

  • Sturz AV, Nowak J (2000) Endophytic communities of rhizobacteria and the strategies required to create yield enhancing associations with crops. Appl Soil Ecol 15:183–190

    Article  Google Scholar 

  • Su F, Jacquard C, Villaume S, Michel J, Rabenoelina F, Clément C, Barka EA, Dhondt-Cordelier S, Vaillant-Gaveau N (2015) Burkholderia phytofirmans PsJN reduces impact of freezing temperatures on photosynthesis in Arabidopsis thaliana. Front Plant Sci 6:810

    Article  PubMed  PubMed Central  Google Scholar 

  • Sun X, Guo LD (2012) Endophytic fungal diversity: review of traditional and molecular techniques. Mycology 3:65–76

    Google Scholar 

  • Sun C, Johnson JM, Cai D, Sherameti I, Oelmüller R, Lou B (2010) Piriformospora indica confers drought tolerance in Chinese cabbage leaves by stimulating antioxidant enzymes, the expression of drought-related genes and the plastid-localized CAS protein. J Plant Physiol 167:1009–1017

    Article  CAS  PubMed  Google Scholar 

  • Sun H, He Y, Xiao Q, Ye R, Tian Y (2013) Isolation, characterization, and antimicrobial activity of endophytic bacteria from Polygonum cuspidatum. Afr J Microbiol Res 7:1496–1504

    Article  CAS  Google Scholar 

  • Supong K, Thawai C, Choowong W, Kittiwongwattana C, Thanaboripat D, Laosinwattana C, Koohakan P, Parinthawong N, Pittayakhajonwut P (2016) Antimicrobial compounds from endophytic Streptomyces sp. BCC72023 isolated from rice (Oryza sativa L.). Res Microbiol 167:290–298

    Article  CAS  PubMed  Google Scholar 

  • Sziderics AH, Rasche F, Trognitz F, Sessitsch A, Wilhelm E (2007) Bacterial endophytes contribute to abiotic stress adaptation in pepper plants (Capsicum annum L). Can J Microbiol 53:1195–1202

    Article  CAS  PubMed  Google Scholar 

  • Taghavi S, Barac T, Greenberg B, Borremans B, Vangronsveld J, van der Lelie D (2005) Horizontal gene transfer to endogenous endophytic bacteria from poplar improved phyto-remediation of toluene. Appl Environ Microbiol 71:8500–8505

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Tian P, Nan Z, Li C (2008) Effect of the endophyte Neotyphodium lolii on susceptibility and host physiological response of perennial ryegrass to fungal pathogens. Eur J Plant Pathol 122:593–602

    Article  Google Scholar 

  • Tripathi S, Kamal S, Sheramati I, Oelmuller R, Varma A (2008) Mycorrhizal fungi and other root endophytes as biocontrol agents against root pathogens. Mycorrhiza 3:281–306

    Article  Google Scholar 

  • Tuteja N (2007) Abscisic acid and abiotic stress signaling. Plant Signal Behav 2:135–138

    Article  PubMed  PubMed Central  Google Scholar 

  • Urairuj C, Khanongnuch C, Lumyong S (2003) Ligninolytic enzymes from tropical endophytic Xylariaceae. Fungal Divers 13:209–219

    Google Scholar 

  • Vallad GE, Goodman RM (2004) Systemic acquired resistance and induced systemic resistance in conventional agriculture. Crop Sci 44:1920–1934

    Article  Google Scholar 

  • Van Aken B, Peres C, Doty S, Yoon J, Schnoor J (2004) Methylobacterium populi sp. nov., a novel aerobic, pink pigmented, facultatively methylotrophic, methane-utilising bacterium isolated from poplar trees (Populus deltoides x nigra DN34). Evol Microbiol 54:1191–1196

    Article  CAS  Google Scholar 

  • Vandermeer J, Perfecto I, Liere H (2009) Evidence for hyperparasitism of coffee rust (Hemileia vastatrix) by the entomogenous fungus, Lecanicillium lecanii, through a complex ecological web. Plant Pathol 58:636–641

    Article  Google Scholar 

  • Vidhyasekaran P, Sethuraman K, Rajappan K, Vasumathi K (1997) Powder formulation of Pseudomonas fluorescens to control pigeonpea wilt. Biol Control 8:166–171

    Article  Google Scholar 

  • Vyas P, Robin J, Sharma KC, Rahi P, Gulati A, Gulati A (2010) Cold adapted and rhizosphere competent strain of Rahnella sp. with broad-spectrum plant growth-promotion potential. J Microbiol Biotechnol 20:1724–1734

    CAS  PubMed  Google Scholar 

  • Wang J, Li G, Lu H, Zheng Z, Huang Y, Su W (2000) Taxol rom Tubercularia sp. strain TF5, an endophytic fungus of Taxus Mairei. FEMS Microbiol Lett 193(2):249–253

    Google Scholar 

  • Waller F, Achatz B, Baltruschat H, Fodor J, Becker K, Fischer M, Heier T, Hückelhoven R, Neumann C, Von Wettstein D, Franken P, Kogel KH (2005) The endophytic fungus Piriformospora indica reprograms barley to salt-stress tolerance, disease resistance, and higher yield. Proc Natl Acad Sci USA 102:13386–13391

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Wei G, Kloepper JW, Tuzan S (1991) Induction of systemic resistance of cucumber to Colletotrichum orbiculare by select strains of plant growth-promoting rhizobacteria. Phytopathol J 81:1508–1512

    Article  Google Scholar 

  • White JF Jr, Torres MS (2010) Is plant endophyte-mediated defensive mutualism the result of oxidative stress protection. Physiol Plant 138:440–446

    Article  CAS  PubMed  Google Scholar 

  • Wicklow DT, Roth S, Deyrup ST, Gloer JB (2005) A protective endophyte of maize: Acremonium zeae antibiotics inhibitory to Aspergillus flavus and Fusarium verticillioides. Mycol Res 109:610–618

    Article  CAS  PubMed  Google Scholar 

  • Wink M (2008) Plant secondary metabolism: diversity, function and its evolution. Nat Prod Commun 3:1205–1216

    CAS  Google Scholar 

  • Yong YH, Dai CC, Gao FK, Yang QY, Zhao M (2009) Effects of endophytic fungi on growth and two kinds of terpenoids for Euphorbia pekinensis. Chin Tradit Herb Drugs 40:18–22

    Google Scholar 

  • You F, Han T, Wu JZ, Huang BK, Qin LP (2009) Antifungal secondary metabolites from endophytic Verticillium sp. Biochem Syst Ecol 37:162–165

    Article  CAS  Google Scholar 

  • Yuan ZL, Lin FC, Zhang CL, Kubicek CP (2010) A new species of Harpophora (Magnaporthaceae) recovered from healthy wild rice (Oryza granulata) roots, representing a novel member of a beneficial dark septate endophyte. FEMS Microbiol Lett 307:94–101

    Article  CAS  PubMed  Google Scholar 

  • Zabalgogeazcoa I (2008) Fungal endophytes and their interaction with plant pathogens: a review. Span J Agric Res 6:138–146

    Article  Google Scholar 

  • Zhang L, Guo B, Li H, Zeng S, Shao H, Gu S, Wei R (2000) Preliminary study on the isolation of endophytic fungus of Catharanthus roseus and its fermentation to produce products of therapeutic value. Chin Tradit Herb Drugs 31:805–807

    CAS  Google Scholar 

  • Zhao K, Penttinen P, Guan T, Xiao J, Chen Q, Xu J, Lindström K, Zhang L, Zhang X, Strobel GA (2011) The diversity and anti-microbial activity of endophytic actinomycetes isolated from medicinal plants in Panxi plateau. China Curr Microbiol 62:182–190

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2021 Springer Nature Singapore Pte Ltd.

About this chapter

Check for updates. Verify currency and authenticity via CrossMark

Cite this chapter

Chakraborty, S., Debnath, D., Mahapatra, S., Das, S. (2021). Role of Endophytes in Plant Disease Management. In: Singh, K.P., Jahagirdar, S., Sarma, B.K. (eds) Emerging Trends in Plant Pathology . Springer, Singapore. https://doi.org/10.1007/978-981-15-6275-4_19

Download citation

Publish with us

Policies and ethics