Abstract
A method to analyze the chlorophyll fluorescence transient was developed using approximation of the experimental signal by a multi-exponential series. Visualization of partial sums of the series made it possible to find the amplitudes and characteristic times for individual phases of the fluorescence induction curve. The method gave more rigid criteria of phase identification as compared with the current semi-empirical approach. Applied to the Chlamidomonas reinhardtii sulfur deprivation case, the method was efficient in finding visually indistinguishable phases of the fluorescence transient, thus allowing early detection of stress.
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A. A. Volgusheva, G. P. Kukarskikh, T. K. Antal, et al., Biophysics (Moscow) 53 (5), 378 (2008).
A. Stirbet and Govindjee, Photosynth. Res. 113 (1–3), 15 (2012).
A. Stirbet, G. Yu. Riznichenko, A. B. Rubin, et al., Biochemistry (Moscow) 79 (4), 379 (2014).
G. C. Papageorgiou, M. Tsimilli-Michael, and K. Stamatakis, Photosynth. Res. 94 (2–3), 275 (2007).
W. Vredenberg and O. Prasil, Photosynth. Res. 117 (1–3), 321 (2013).
D. Lazár, J. Plant Physiol. 175C, 131 (2015).
L. N. M. Duysens and H. E. Sweers, in Studies on Microalgae and Photosynthetic Bacteria, (Univ. of Tokyo Press, Tokyo, Japan, 1963), pp. 353–372.
S. Silvestre, S. de Sousa Araujo, M. C. Vaz Patto, et al., J. Integr. Plant Biol. 56 (7), 610 (2014).
T. G. Downing, R. R. Phelan, and S. Downing, J. Arid Environ. 112, 147 (2015).
Y. Z. Zong, W. F. Wang, Q. W. Xue, et al., Photosynthetica 52 (1), 63 (2014).
L. Lei, L. Xiang-yi, X. Xin-wen, et al., Plant Physiol. Biochem. 74, 239 (2014.)
M. Brestic, M. Zivcak, K. Olsovska, et al., Plant Physiol. Biochem. 81, 74 (2014).
M. Zivcak, M. Brestic, H. M. Kalaji, et al., Photosynth. Res. 119 (3), 339 (2014).
M. Darwish, F. Lopez-Lauri, M. El Maataoui, et al., J. Photochem. Photobiol. B 134, 49 (2014).
P. Malaspina, P. Giordani, M. Faimali, et al., Ecol. Indic. 43, 126 (2014).
B. J. Strasser and R. J. Strasser, in Photosynthesis: From Light to Biosphere. Proc. 10th Int. Photosynthesis Congress, Ed. by P. Mathis (Montpellier, France, 1995), Vol. 5, pp. 977–980.
R. J. Strasser, M. Tsimilli-Michael, and A. Srivastava, in Chlorophyll a Fluorescence: A Signature of Photosynthesis, Ed. by G. C. Papageorgiou and Govindjee (Springer, 2004), pp. 321–362.
S. Boisvert, D. Joly, and R. Carpentier, FEBS J. 273 (20), 4770 (2006).
P. Pospisil and H. Dau, Photosynth. Res. 65 (1), 41 (2000).
T. Antal and A. Rubin, Photosynth. Res. 96 (3), 217 (2008).
R. J. Strasser and A. D. Stirbet, Math. Comp. Simulat. 56, 451 (2001).
D. Lazár, J. Theor. Biol. 220 (4), 469 (2003).
X.-G. Zhu, Govindjee, N. R. Baker, et al., Planta 223 (1), 114 (2005).
N. E. Belyaeva, F.-J. Schmitt, R. Steffen, et al., Photosynth. Res. 98 (1–3), 105 (2008).
N. E. Belyaeva, F.-J. Schmitt, V. Z. Paschenko, et al., Biosystems. 103 (2), 188 (2011).
T. Yu. Plyusnina, E. N. Voronova, V. N. Gol’tsev, et al., Komp’yut. Issled. Model. 4 (4), 943 (2012).
T. Yu. Plyusnina, G. Yu. Riznichenko, and A. B. Rubin, Russ. J. Plant Physiol. 60 (4), 518 (2013).
S. S. Khrushchev, T. Yu. Plyusnina, and G. Yu. Riznichenko, Mathematical Biology and Bioinformatics: V Int. Conf., Ed. by V.D. Lakhno (Pushcnino, 2-14), pp. 59–60.
A. Srivastava, B. Guisse, H. Greppin, et al., Biochim. Biophys. Acta: Bioenerg. 1320 (1), 95 (1997).
B. Guisse, A. Srivastava, and R. J. Strasser, Arch. Sci. Geneve (1995).
D. Lazár and P. Pospisil, Eur. Biophys. J. 28 (6), 468 (1999).
S. Mathur, P. Mehta, and A. Jajoo, Physiol. Mol. Biol. Plants 19 (2), 179 (2013).
T. Antal, T. Krendeleva, and A. Rubin, Photosynth. Res. 94 (1), 13 (2007).
T. Antal, A. Kolacheva, A. Maslakov, et al., Photosynth. Res. 114 (3), 143 (2013).
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Original Russian Text © T.Yu. Plyusnina, S.S. Khruschev, G.Yu. Riznichenko, A.B. Rubin, 2015, published in Biofizika, 2015, Vol. 60, No. 3, pp. 487–495.
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Plyusnina, T.Y., Khruschev, S.S., Riznichenko, G.Y. et al. An analysis of the chlorophyll fluorescence transient by spectral multi-exponential approximation. BIOPHYSICS 60, 392–399 (2015). https://doi.org/10.1134/S000635091503015X
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DOI: https://doi.org/10.1134/S000635091503015X