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Creation of thermostable polypeptide cassettes for amino acid balancing in farm animal rations

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Abstract

The study of the poultry needs in basic nutrients allowed the development of a scheme for obtaining feed polypeptides (“polypeptide cassettes”) enriched with L-amino acids, which are necessary for the metabolism of birds. The amino acid and nucleotide profiles of about 500 bioinformation sequences of thermostable plant proteins and archaea were studied, on the basis of which candidate sequences were selected. In silico, the amino acid and domain composition of the thermostable polypeptides has been optimized. A library of genetically engineered constructs encoding optimized polypeptides with the necessary composition of L-amino acids irreplaceable for poultry has been created. Primary E. coli producer strains were obtained, and the expression and thermostability of the target polypeptides were studied.

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References

  1. Hermann, T., J. Biotechnol., 2003, vol. 104, nos. 1–3, pp. 155–172.

    Article  CAS  PubMed  Google Scholar 

  2. Leuchtenberger, W., Huthmacher, K., and Drauz, K., Appl. Microbiol. Biotechnol., 2005, vol. 69, no. 1, pp. 1–8.

    Article  CAS  PubMed  Google Scholar 

  3. Gray, G.M. and Cooper, H., L, Gastroenterology, 1971, vol. 61, pp. 535–544.

    CAS  Google Scholar 

  4. Jung, E., Kim, J., Kim, M., Jung, D.H., Rhee, H., Shin, J.M., Choi, K., Kang, S.K., Kim, M.K., Yun, C.H., Choi, Y.J., and Choi, S.H., BMC Bioinformatics, 2007, vol. 8, no. 245, pp. 1–9.

    Google Scholar 

  5. Tutel'yan, V.A., Khavinson, V.Kh., and Malinin, V.V., Bull. Exp. Biol. Med., 2003, vol. 135, no. 1, pp. 1–5.

    Article  PubMed  Google Scholar 

  6. Silk, D.B., Fairclough, P.D., Clark, M.L., Hegarty, J.E., Marrs, T.C., Addison, J.M., Burston, D., Clegg, K.M., and Matthews, D.M., JPEN J. Parenter. Enteral Nutr., 1980, vol. 4, no. 6, pp. 548–553.

    Article  CAS  PubMed  Google Scholar 

  7. Feng, X.Y., Ji, C., and Jiang, H., J. China Agric. Univ., 2002, vol. 7, no. 1, pp. 107–113.

    Google Scholar 

  8. Wang, L., Ma, Q., Cheng, J., Guo, B., and Yue, H., Asian-Australas. J. Anim. Sci., 2004, vol. 17, no. 9, pp. 1277–1280.

    Article  CAS  Google Scholar 

  9. Namkung, H. and Leeson, S., Poult. Sci., 1999, vol. 78, no. 9, pp. 1317–1319.

    Article  CAS  PubMed  Google Scholar 

  10. Kocher, A., Choct, M., Ross, G., Broz, J., and Chung, T.K., J. Appl. Poult. Res., 2003, vol. 12, pp. 275–283.

    Article  CAS  Google Scholar 

  11. Ding, H-Ch., Li, D-F., Wei, X-Y., Huang, Y-W., Cui, S., Xie, H-J., and Zhou, T., J. Sci. Food Agr., 2017, vol. 97, no. 6, pp. 1746–1752.

    Article  CAS  Google Scholar 

  12. Ferri, M., Graen-Heedfeld, J., Bretz, K., Guillon, F., Michelini, E., Calabretta, M., Lamborghini, M., Gruarin, N., Roda, A., Kraft, A., and Tassoni, A., PLoS One, 2017, vol. 12, no. 1, p. e0170954.

    Article  PubMed  PubMed Central  Google Scholar 

  13. Pokrovskaya, M.V., Aleksandrova, S.S., Pokrovsky, V.S., Veselovsky, A.V., Grishin, D.V., Abakumova, O.Y., Podobed, O.V., Mishin, A.A., Zhdanov, D.D., and Sokolov, N.N., Mol. Biotechnol., 2015, vol. 57, no. 3, pp. 251–264.

    Article  CAS  PubMed  Google Scholar 

  14. Grishin, D.V. and Sokolov, N.N., Biochemistry (Moscow) Suppl. Ser. B: Biomed. Chem., 2014, vol. 8, no. 1, pp. 11–18.

    Article  Google Scholar 

  15. Li, Y., Biotechnol. Appl. Biochem., 2009, vol. 6, no. 54 (1), pp. 1–9.

    Article  Google Scholar 

  16. Rao, S., Xu, Z., Su, Y., Li, J., Sun, J., and Yang, Y., Protein Pept. Lett., 2011, vol. 18, no. 7, pp. 699–706.

    Article  CAS  PubMed  Google Scholar 

  17. Ling, Z., Kang, Z., Liu, Y., Liu, S., Chen, J., and Du, G., World J. Microbiol. Biotechnol., 2014, vol. 30, no. 6, pp. 1819–1827.

    Article  CAS  PubMed  Google Scholar 

  18. Olichon, A., Schweizer, D., Muyldermans, S., and de Marco, A., BMC Biotechnol., 2007, vol. 7, no. 7, pp. 1–8.

    Google Scholar 

  19. Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G., Nucleic Acid Res., 1997, vol. 25, no. 24, pp. 4876–4882.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  20. Thompson, J.D., Higgins, D.G., and Gibson, T.J., Nucleic Acids Res., 1994, vol. 22, no. 22, pp. 4673–4680.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  21. Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D.J., Nucleic Acids Res., 1997, vol. 25, no. 17, pp. 3389–3402.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  22. Kibbe, W.A., Nucleic Acids Res., 2007, vol. 35 (Web Server Issue), pp. W43–W46.

    Article  PubMed  PubMed Central  Google Scholar 

  23. Grishin, D.V., Pokrovskaya, M.V., Podobed, O.V., Gladilina, Yu.A., Pokrovskii, V.S., Aleksandrova, S.S., and Sokolov, N.N., Biomed. Khim., 2017, vol. 63, no. 2, pp. 124–131.

    Article  CAS  PubMed  Google Scholar 

  24. Chan, C.H., Liang, H.K., Hsiao, N.W., Ko, M.T., Lyu, P.C., and Hwang, J.K., Proteins, 2004, vol. 57, no. 4, pp. 684–691.

    Article  CAS  PubMed  Google Scholar 

  25. Ku, T.H., Lu, P.Y., Chan, C.H., Wang, T.S., Lai, S.Z., Lyu, P.C., and Hsiao, N.W., Comp. Biol. Chem., 2009, vol. 33, no. 6, pp. 445–450.

    Article  CAS  Google Scholar 

  26. Pokrovskaya, M.V., Aleksandrova, S.S., Pokrovsky, V.S., Omeljanjuk, N.M., Borisova, A.A., Anisimova, N.Yu., and Sokolov, N.N., Protein Expr. Purif., 2012, vol. 82, no. 1, pp. 150–154.

    Article  CAS  PubMed  Google Scholar 

  27. DNA Cloning, A Practical Approach, Glover, D.M., Ed., Oxford: IRL Press, 1985.

  28. Drury, L., Methods Mol. Biol., 1996, vol. 58, pp. 249–256.

    CAS  PubMed  Google Scholar 

  29. Birnboim, H.C. and Doly, J.A., Nucleic Acids Res., 1979, vol. 7, no. 6, pp. P. 1513–1523.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  30. Yadav, P., Yadav, A., Garg, V., Datta, T.K., Goswami, S.L., and De, S., Indian J. Exp. Biol., 2011, vol. 49, no. 7, pp. P. 558–560.

    CAS  PubMed  Google Scholar 

  31. Gibson, D.G., Methods Enzymol., 2011, vol. 498, pp. 349–361.

    Article  CAS  PubMed  Google Scholar 

  32. Chiba, L.I., Animal Nutrition, Handbook, Section 12: Poultry Nutrition and Feeding, 2014, pp. 410–425.

    Google Scholar 

  33. Schutte, J.B. and De Jong, J., in Ideal Amino Acid Profile for Poultry. Feed Manufacturing in the Mediterranean Region: Recent Advances in Research and Technology, Brufau, J. and Tacon, A., Eds., Zaragoza: CIHEAM, 1999, pp. 259–263.

  34. Bryden, W.L., Li, X., Ravindran, G., Hew, L.I., and Ravindran, V., Ileal Digestible Amino Acids in Feedstuffs for Poultry, RIRDC Publication 09/071, Rural Industries Research and Development Corporation, Barton: ACT, 2009.

    Google Scholar 

  35. Dari, R.L., Penz, A.M., Jr., Kessler, A.M., and Jost, H.C., J. Appl. Poultry Res., 2005, vol. 14, pp. 195–203.

    Article  CAS  Google Scholar 

  36. Zhindamongkon, K., Kombikorma, 2014, no. 6, pp. 72–73.

    Google Scholar 

  37. Abbasi, M.A., Mahdavi, A.H., Samie, A.H., and Jahanian, R., Rev. Bras. Cienc. Avic., 2014, vol. 16, no. 1, pp. 35–44.

    Article  Google Scholar 

  38. Pesti, G.M., J. Appl. Poult. Res., 2009, vol. 18, no. 3, pp. 477–486.

    Article  CAS  Google Scholar 

  39. Powers, W. and Angel, R., Poult. Sci., 2008, vol. 87, no. 10, pp. 1929–1938.

    Article  CAS  PubMed  Google Scholar 

  40. Terpe, K., Appl. Microbiol. Biotechnol., 2003, vol. 60, no. 5, pp. 523–533.

    Article  CAS  PubMed  Google Scholar 

Download references

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Correspondence to D. V. Grishin.

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Original Russian Text © D.V. Grishin, Yu.A. Gladilina, S.S. Aleksandrova, M.V. Pokrovskaya, O.V. Podobed, V.S. Pokrovskii, D.D. Zhdanov, N.N. Sokolov, 2017, published in Prikladnaya Biokhimiya i Mikrobiologiya, 2017, Vol. 53, No. 6, pp. 600–610.

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Grishin, D.V., Gladilina, Y.A., Aleksandrova, S.S. et al. Creation of thermostable polypeptide cassettes for amino acid balancing in farm animal rations. Appl Biochem Microbiol 53, 688–698 (2017). https://doi.org/10.1134/S0003683817060072

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