Abstract
Diamond-based materials have unique properties that are exploited in many electrochemical, optical, thermal, and quantum applications. When grown via chemical vapor deposition (CVD), the growth rate of the (110) face is typically much faster than the other two dominant crystallographic orientations, (111) and (100). As such, achieving sufficiently large-area and high-quality (110)-oriented crystals is challenging and typically requires post-growth processing of the surface. Whilst CVD growth confers hydrogen terminations on the diamond surface, the majority of post-growth processing procedures render the surface oxygen-terminated, which in turn impacts the surface properties of the material. Here, we determine the oxygenation state of the (110) surface using a combination of density functional theory calculations and X-ray photoelectron spectroscopy experiments. We show that in the 0–1000 K temperature range, the phase diagram of the (110) surface is dominated by a highly stable phase of coexisting and adjacent carbonyl and ether groups, while the stability of peroxide groups increases at low temperatures and high pressures. We propose a mechanism for the formation of the hybrid carbonyl-ether phase and rationalize its high stability. We further corroborate our findings by comparing simulated core-level binding energies with experimental X-ray photoelectron spectroscopy data on the highest-quality (110)-oriented diamond crystal surface reported to date.
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Introduction
Diamond is a material that possesses numerous extreme properties such as the highest hardness1, thermal conductivity2, and Debye temperature3 of any material, and thus has found use in a variety of fields. For many technological applications, the most common approach to growing diamond is via the process of chemical vapor deposition (CVD)4. Whilst high pressure, high temperature (HPHT) synthesis has also found use, it can be difficult to control impurity content via HPHT5, hence the preferred use of CVD-grown crystals in many technological applications6. For large-area applications, it is much cheaper to grow polycrystalline diamond (PCD) than single-crystal diamond (SCD); PCD has numerous industrial applications, such as in thermal management7 and electrochemistry. In the latter case, highly boron-doped diamond (BDD) has been used as an electrode material8 for a variety of sensing applications, as well as waste water treatment and chemical disinfection9.
Depending on CVD growth conditions, the (110) facet typically grows much faster than the (111) and (100) surfaces, and therefore outgrows the other two primary crystallographic orientations10,11,12. In this regard, the (110) facet thus serves as a useful model of the more reactive sites during diamond growth13. In polycrystalline material, the (110) facets can be revealed by mechanically polishing to a surface roughness where the surface is predominantly (110)-textured. This has been experimentally demonstrated using electron backscatter diffraction14 and scanning transmission electron microscopy15. Such surfaces have found practical use in electrochemical applications, where the PCD material can be treated as a textured surface with a dominant (110) orientation14,15. (110)-oriented SCDs also currently find applications in photonics16. With SCD, growth of the required crystal face is achieved by using a single crystal substrate of the same orientation for epitaxial growth17 or by laser cutting along the required axis post-growth. As the diamond grows thicker, or the growth substrate moves away from atomic smoothness, achieving monocrystallinity becomes more challenging11,17. This is especially true of the (110) orientation, where the crystal face decreases in size as the crystal gets thicker18.
Whilst diamond surfaces are usually hydrogen-terminated after CVD growth19, mechanical polishing or chemical cleaning, typically using strong oxidizing agents, leaves the surface oxygen-terminated, which confers hydrophilicity20,21 and a positive electron affinity22. Even if untreated, the hydrogen-terminated surface can gradually oxidize over time in air23,24. Oxygen terminations can reduce surface electrical conductivity23, increase capacitance25, and impact the electron-transfer kinetics of inner-sphere electrochemical reactions on BDD electrodes8. Oxygen terminations also increase the density of negatively-charged nitrogen-vacancy centers near the surface26,27 (that can arise from impurities in the CVD process4,19), which have applications in photonics, quantum optics28, and quantum computing29,30,31. A detailed atomic-scale understanding of the surface termination and elementary surface composition of (110)-oriented diamond is therefore of vital importance.
The oxygenation state of the diamond (110) surface has not been extensively characterized, with previous studies primarily focusing on the (111) and (100) surfaces13. This is most likely due to the challenges associated with growing and preparing a (110)-oriented SCD surface with a large-enough area at a high-enough quality11 (vide infra). Theoretical studies have identified the presence of carbonyl and ether functional groups on the diamond (111) and (100) surfaces32,33,34,35,36,37,38,39,40,41,42. Experimental techniques, such as infrared (IR) and X-ray photoelectron spectroscopy (XPS), can be used to confirm the presence of different oxygenic moieties on diamond surfaces. For example, experimental studies on the (111) and (100) surfaces indicate the presence of carbonyl and ether groups43,44,45,46 after the removal of loosely-bound compounds and organic contaminants. The few experimental studies that exist for the (110) surface are also interpreted in the context of a coexistence of carbonyl and ether groups13,47,48,49, with peroxide groups being reported on the (110) surface at low temperatures using IR spectroscopy13. However, in two of these studies, the (110) surfaces were subjected to a hydrogen plasma treatment before analysis13,49, which is known to induce the formation of (111) microfacets13,49,50, compromising the (110) crystallinity of the surface. Makau and Derry only presented XPS data recorded at room temperature (RT), where the physisorbed contaminants may still be present and no details about the quality of the studied crystal were provided47. In Baldwin et al.48, the crystal was assumed to contain a mixture of (110) and (111) facets and a large number of step edges, with a measured surface roughness of 1 nm. These studies highlight the challenges of preparing high-quality (110) surfaces.
In this paper, we present a systematic characterization of the structure and stability of various oxygenic terminations of the diamond (110) surface. This is achieved through a combination of density functional theory (DFT)51,52 calculations and XPS experiments (at elevated temperatures) on an epitaxially CVD-grown (110)-oriented BDD substrate. The post-growth surface is polished to an average surface roughness and a root mean square roughness of 0.18 and 0.23 nm respectively, as was determined using atomic force microscopy (AFM). X-ray diffraction (XRD) and low-energy electron diffraction (LEED) did not indicate the presence of any other crystallographic orientations. We use ab initio atomistic thermodynamics53,54,55 based on DFT to establish a phase diagram of a large number of surface structures and identify the most stable oxygenation state of the (110) surface. The phase diagram of the (110) surface is dominated by highly stable coexistent carbonyl and ether groups, which is also corroborated by XPS measurements and simulations. This highly stable phase of adjacent carbonyl and ether groups satisfies all valencies and a simple mechanism connecting this structure to adsorbed molecular oxygen can be formulated. Individual surface carbonyls on the other hand would be unstable and lead to the creation of surface radicals that can induce further surface restructuring.
Results and discussion
Structure and stability of oxygen-terminated surfaces
An extensive computational structure search was performed to identify the atomically-flat oxygen-terminated (110) surfaces with the highest stabilities, varying both the termination and surface coverage of oxygen. Our search involved placing surface-terminal carbonyl/ketone (C=O), ether (C–O–C), peroxide (C–O–O–C), and hydroxy (C–OH) groups, as well as combinations thereof, on a diamond (110) surface slab and performing geometry optimizations. We consider 22 different optimized surface terminations, which are visualized along with their calculated adsorption energies and fractional oxygen surface coverages in Supplementary Table 1 in Supplementary Note 2. Table 1 summarizes the adsorption energies of the most stable phases, which are also depicted in Fig. 1; in both, three- and five-ring ethers are denoted as Ether3 and Ether5, respectively, and carbonyls are denoted as Keto groups. We find the most stable phases to contain carbonyl, ether, and peroxide functional groups, which agrees with existing experimental literature13,47,48,49. In particular, phases containing coexistent carbonyl and ether groups appear to have the largest adsorption energy, with the p(2 × 1)Keto-Ether5 phase having by far the largest Eads and Eads/A values of 3.03 eV atom−1 and 0.34eVÅ−2, respectively. The p(2 × 2)Keto-Ether5 phase, a half-coverage form of the p(2 × 1)Keto-Ether5 phase, is the most stable phase at lower coverage.
The shaded region represents the convex hull of the free energy of adsorption, ΔGads. ΔGads is presented as a function of the chemical potential of oxygen, ΔμO, in the gas phase. The free energy of adsorption is shown for the most stable phases listed in Table 1. A full free energy plot of all phases can be seen in Supplementary Fig. 1. Orthographic ball-and-stick visualizations of the first three carbon layers of the phases are shown as viewed ‘front on’ from the [001] direction, with carbon and oxygen atoms shown in gray and red respectively. The unit cell outlines of the surrounding structures are shown in black dashed lines with surface axes also presented.
Figure 1 shows the convex hull of the calculated free energy of adsorption, ΔGads, as a function of the gas-phase chemical potential of oxygen, ΔμO; a full free energy plot featuring all the phases can be found in Supplementary Fig. 1 in Supplementary Note 3. Here we consider the oxygenated surface to be in equilibrium with a gas phase of molecular oxygen at temperature and pressure conditions, (T, p), that correspond to a certain chemical potential (for details see Methods section). The structure with the largest ΔGads value (note the inverted y-axis) is the most stable at the given ΔμO value, and therefore (T, p) couple, and will be thermodynamically realized under these conditions (notwithstanding any kinetic barriers)53,55. Over the shown range of ΔμO values, the following three surface structures constitute the convex hull, i.e., they are the most thermodynamically stable under these conditions: the clean (110) surface, the p(2 × 1)Keto-Ether5 and the p(1 × 1)Peroxide phases. The unterminated surface is the most stable configuration below ΔμO = −3.03 eV atom−1. As ΔμO increases further, the p(2 × 1)Keto-Ether5 phase is the most stable until ΔμO = 0.29 eV atom−1. Above this, the p(1 × 1)Peroxide phase becomes the most stable configuration, which is to be expected as the free energy of oxygen adsorption increases with ΔμO. This results in an increase in the stability of oxygen-rich phases relative to oxygen-poor surfaces and the p(1 × 1)Peroxide phase possesses the maximal oxygen coverage. Visualizations of the clean surface, p(2 × 1)Keto-Ether5 and p(1 × 1)Peroxide phases are given in Fig. 2.
The range of temperatures and pressures at which the most stable phases are realized can be seen in Fig. 3. Over the temperature range of 0–1000 K, at standard pressure, the p(2 × 1)Keto-Ether5 phase is the most stable configuration, and therefore is expected at standard atmospheric conditions. The unterminated surface is the most stable phase at higher temperatures (T > 1000 K) and lower pressures (p < 10−6 atm), which is expected as the stability of an oxygen ideal gas increases with increasing T and decreasing p. The p(1 × 1)Peroxide phase is the most stable phase at lower temperatures, with suprema ranging from around 60 K to around 100 K over the whole pressure range.
Previous experimental studies on the oxygenation state of the (110) surface provide evidence of oxygen species which broadly supports our findings. However, we note the caveat concerning the quality of the surfaces used in these studies13,47,48,49. These studies report carbonyl and ether groups on the surface13,47,48,49, while surface peroxide species are reported to exist at low temperatures (90 K)13. However, we note that the ab initio atomistic thermodynamics method does not consider any kinetic information, such as reaction barriers, that are likely to affect which phases are experimentally observed under which conditions. Vibrational contributions to ΔGads were also not considered here, comprising the vibrational entropy and enthalpy53,54, which can shift the stability boundaries to some extent. We do not expect these contributions to affect the convex hull as the Keto-Ether5 phases are significantly more stable than all other considered phases. As an additional note, the Perdew-Burke-Ernzerhof (PBE)56 exchange-correlation (XC) functional, which has been used in this work, is known to underestimate adsorption energies and overestimate adsorption distances in many cases57,58,59. To assess the effect of the choice of XC functional, surface structures were reoptimized, and adsorption energies recalculated with different XC functionals60,61,62,63,64 for the p(2 × 1)Keto-Ether5 and p(1 × 1)Peroxide phases. While we find that the absolute adsorption energy does depend on the XC functional, the ordering of the two phases and the significantly higher stability of the p(2 × 1)Keto-Ether5 phase is confirmed as independent of the XC functional, as can be seen in Supplementary Table 2 in Supplementary Note 5. We, therefore, consider our findings to be robust with respect to the choice of XC functional.
In the following, we address the origin of the high stability of the Keto-Ether5 phases. During the structure optimizations, the Keto-Ether5 phases form spontaneously from manually-prepared peroxide structures aligned along the \([1\overline{1}0]\) direction. A schematic of the optimization mechanism is shown in Fig. 4. The initially-adsorbed peroxide forms two oxygen radicals, one of which is saturated by forming a carbonyl group at the expense of a carbon-carbon bond between the first and the second layer, while the other is stabilized by bridging the ridge to form a five-ring ether. The p(2 × 1)Keto-Ether5 structure has been verified to be the most stable structure via a global structure search using the minima-hopping algorithm65,66,67.
First, a the O–O bond breaks to form two oxygen radicals (O⋅), one of which then proceeds to form a double bond with a surface carbon atom (b). Due to the propensity of carbonyl groups to form trigonal planar structures, one of the C–C bonds in the tetrahedral diamond structure also breaks. Both processes are underway in the transition state (c). In order to form a stable structure, the remaining O⋅ bridges over the surface ridge to form an ether group, allowing the carbon radical (C⋅) to bond with another carbon atom behind the carbonyl (d). The resulting structure is the p(2 × 1)Keto-Ether5 phase (e). Surface axes are also presented.
To further understand the large adsorption energy of 3.03 eV atom−1, we examine the structure of the p(2 × 1)Keto-Ether5 phase against other surface phases by analyzing bond lengths and bond angles, and by comparing against valence shell electron pair repulsion (VSEPR) theory. In our calculations, we find that carbonyl groups seem to lead to some lattice distortion, with C−C=O bond angles of 123.2∘ and 125.0∘ in the p(2 × 1)Keto-Ether5 phase, which indicates a more trigonal planar surface structure. Based on VSEPR theory, partial sp2 hybridization has occurred in the surface carbon layers, which is consistent with partial graphitization and sp2 hybridization in diamond68,69,70,71. Further geometrical distortions can be seen by comparing carbon-oxygen bond lengths. Other surface terminations that feature ether, peroxide, or hydroxy surface groups seem to preserve the sp3 hybridization of the carbon atoms, with a C−O bond length of typically around 1.45 Å, with the exception of 1.55 Å in Ether5 phases; in comparison, the C=O bond length in the Keto-Ether5 phases is 1.20 Å, shorter than the observed C−O bonds. The formation of the C=O bond pulls the respective carbon atom above the diamond surface plane, as can be seen in the Keto-Ether5 structures shown in Fig. 1.
While C=O bonds are typically stronger than C−O bonds, individual surface carbonyl groups cannot be realized on a pristine (110) surface as they would require the breaking of C−C bonds, creating carbon radicals and leading to a substantial deformation of the surface. To circumvent that, another surface moiety such as an ether group must be present to saturate the carbon radicals and minimize the necessary deformation (Fig. 4). The adjacent carbonyl and ether functionalities in the Keto-Ether5 phases possess such a high stability because their local pairing is able to balance the high adsorption energy from the carbonyl with low structural deformation in the surface. Taking the distorted surface slab upon adsorption of oxygen in the p(2 × 1)Keto-Ether5 phase to be Eslab in Eq. 1, the Eads value is recalculated to be 5.26 eV atom−1. Therefore, the structural deformation penalty associated with adsorption is 2.23 eV atom−1. Without the ether group, this deformation penalty would be much higher. The fact that the geometry optimization of an adsorbed peroxide leads to the formation of the Keto-Ether5 phase, suggests that the pathway shown in Fig. 4 can be a viable oxidation mechanism of the diamond (110) surface.
X-ray photoemission signatures of oxygen and carbon species
To connect our predicted structures with experimental data, the core-level binding energies (BEs) of the central carbon and oxygen species in our DFT-based structures were simulated with the Delta Self-Consistent Field method72. We compare these simulations to results from our own experimental XPS measurements, as well as to those reported in literature47,48. The DFT-based core-level simulations were performed for both cluster and periodic models. While periodic models allow for accurate calculation of the relative shifts between different species, their inherent properties mean that absolute BEs, which can be directly compared to experimental values, are only accessible in cluster calculations72. For both periodic and cluster calculations, the convergence behavior of the resulting BEs was carefully tested with respect to the unit cell size and cluster radius. All convergence tests are compiled in Supplementary Note 7, where Supplementary Fig. 7 shows the convergence behavior of the BEs for the p(1 × 1)Peroxide phase. In the case of the p(2 × 1)Keto-Ether5 phase, the difference between the oxygen 1s (O 1s) BE for the carbonyl and ether groups is a good measure of convergence behavior. Supplementary Fig. 8 shows that both the cluster and periodic calculations converge to the same value (0.8 eV). We can therefore rule out finite-size and cell-charging effects from affecting the relative BE shifts obtained by our periodic calculations. The agreement between the cluster and periodic models also verifies that the terminating hydrogen species in the cluster model do not influence the XPS behavior of the central carbon and oxygen atoms. Therefore all BEs reported hereafter were obtained from the converged periodic surface models.
The simulation results for the core-electron BEs of the Keto-Ether5 phase in two coverages, p(2 × 1) and p(2 × 2), are detailed in Tables 2 and 3, where they are compared to experimental XPS data, both from literature47,48 and from our own experiments. The tables compare relative BE shifts and differences between the different species. The carbon 1s (C 1s) BEs in Table 2 are presented as shifts with respect to the bulk carbon signal of the diamond surface, both for experiment and simulation. In the case of the O 1s data in Table 3, only the BE difference between the two oxygen species present in the different functional groups, carbonyl (C=O) and ether (C–O–C), are discussed.
As can be seen in Table 2, the calculated C 1s BEs for carbonyl and ether carbons are close together; in the lower-coverage p(2 × 2) phase, the C=O BE sits evenly between the two C–O–C carbons present in the structure. This result is in agreement with our own experiments, presented in Fig. 5, which shows the experimental C 1s and O 1s spectra recorded after annealing our sample surface to 500 ∘C. The C 1s spectrum in Fig. 5(a) is dominated by a main peak with a small shoulder at a higher BE, caused by a small peak partly underneath the main peak. The BE difference between the two peaks is 0.7 eV (0.6–0.9 eV). As can be seen in Fig. 5b, two species are present in the O 1s spectrum: the high BE peak corresponds to an ether moiety, while the low BE peak can be attributed to a carbonyl group. The relative shift between the two species is 1.5 eV (1.4–1.6 eV). The lower BE peak of the carbonyl has a higher intensity, with an intensity ratio of about 2:1. Therefore, both spectra can be fitted sufficiently using only two sub-peaks. The resulting experimental peak shifts between the two respective peaks are also included in Tables 2 and 3.
Contrary to both our calculations and experiments, data published in literature47,48 shows two additional oxygen-related peaks at much higher BE. We believe that this discrepancy, as discussed above, is due to both crystal quality and the lack of sample annealing prior to running XPS experiments. Even small concentrations of contaminants in the atmosphere that the sample is exposed to prior to measurement can lead to a high coverage of contaminants adsorbed on the surface; these contaminants will still be present after the sample is introduced into the vacuum chamber of the photoelectron spectrometer73. Contaminants can cause surface reactions, introduce additional signals into the O 1s region, and also show oxygen-related peaks in the C 1s region. Supporting our argument are our own XPS experiments, where a large quantity of contaminants were observed desorbing from the diamond surface when annealed, as shown in Supplementary Fig. 11); these contaminants were most probably adventitious non-diamond carbonaceous species such as hydrocarbons, CO-derivatives and other organic compounds74,75,76,77. The spectra taken prior to sample annealing show a similar shape as the literature data, and also contain additional peaks at 1.5 and 4.1 eV above the bulk diamond peak, as is shown in Supplementary Fig. 11c in Supplementary Note 8.
Discussion
The simulated BEs of the lower coverage p(2 × 2)Keto-Ether5 system are close to our experimental XPS data, while the higher coverage p(2 × 1)Keto-Ether5 model shows a larger deviation from the experiment. We also observe good agreement between simulated O 1s BE differences for the low coverage structure and our own experiments (see Table 3). On the other hand, the simulations of the high coverage structure show deviations that cannot be reconciled with our experiments once the obvious surface contaminants are removed. We hypothesize that the larger deviations observed for the p(2 × 1) system might be due to the higher coverage structure being difficult to realize for realistic surfaces under our experimental conditions as employed herein.
XRD and LEED experiments were performed to gather further information about the quality of our studied diamond (110) surface, the results of which are compiled in Supplementary Note 8. XRD measurements showed the sample surface to be orthogonal to the [110] direction (Supplementary Fig. 9), and the surface-sensitive LEED measurements showed a reflex pattern in agreement with the translational symmetry of a (110) surface50,78,79,80 (Supplementary Fig. 10). AFM measurements were also conducted to obtain information about the sample surface roughness and morphology. Figure 6 shows a typical 1.0 × 1.0 μm2 image of the sample surface topography; Sa and Sq were found to be only 0.18 and 0.23 nm respectively, which is close to atomic smoothness. The small bright spots are associated with impurities (‘dirt’) on the surface. Repeated sonication of the crystal during the cleaning stage was found to decrease the small particle density and size. Our (110) surface is of higher quality than all others currently reported in literature13,47,48,49,50,78,79,80,81 for this challenging crystallographic growth orientation.
Using ab initio atomistic thermodynamics based on DFT, we have established a phase diagram of the most stable oxygen terminations of the diamond (110) surface. Within the 0–1000 K temperature range, the phase diagram is dominated by a highly stable phase of coexistent carbonyl and ether functional groups, while peroxide groups become more stable at low temperatures and high oxygen pressures, which is in agreement with existing experimental literature. Adjacent carbonyl and ether groups are observed, which as our calculations suggest, can form by a transition from an adsorbed peroxide structure. The high stability of the adjacent carbonyl and ether groups arises from cooperative effects that mitigate surface deformation and satisfy all valencies. Our findings are robust with respect to the XC functional. From the simulation of core-level BEs, we find that a lower coverage of this coexistent and adjacent carbonyl/ether phase produces core-level shifts in agreement with our experimental XPS data. While the experimental data does not agree with the simulation results for the most stable highest coverage, this could indicate that this coverage may not be able to be realized due to kinetic hindrance and coverage limitations on realistic surfaces. As the fastest growing major diamond facet, the (110) orientation is the one least studied in literature due to its associated growth challenges. However, in polished PCD applications, it is the dominant surface crystallography and has use in technological CVD diamond applications. Our combined theoretical and experimental analyses provide a much improved understanding of the oxygen-terminated diamond (110) surface, which has been lacking to-date. A better characterization of the chemical terminations of diamond-based materials is crucial to understanding elementary diamond growth and electrochemical surface processes.
Methods
Computational structure exploration
DFT51,52 calculations were conducted using the numeric atomic orbital FHI-aims82,83,84,85,86 software package, with calculations making use of the PBE56 XC functional. Structures were constructed using the Atomic Simulation Environment67; all structures were symmetric with oxygenic species terminating both the top and bottom of a seven-layer dipole-canceling diamond (110) slab. To account for cases where only partial oxidation of the (110) surface might occur, the following surface unit cells were optimized and studied: p(1 × 1), p(2 × 1), p(1 × 2), and p(2 × 2). The numeric atomic orbitals were represented using a ‘tight’ basis set82 and van der Waals effects were included through the pairwise long-range Tkatchenko-Scheffler dispersion correction method87. Further self-consistency settings can be found in Supplementary Note 1.
To calculate the oxygen adsorption energy, Eads, Eq. 1 was used:
where N is the number of oxygen atoms, Etotal is the total energy of the terminated surface and Eslab is the energy of the surface onto which the oxygenic species is being adsorbed. The oxygen adsorbate energy, EO, was calculated as half the total energy of a free oxygen molecule (O2), while for hydroxyl adsorbates, EO was calculated as the difference between the energy of a free water molecule and half the energy of a free hydrogen molecule. The adsorption energy per unit cell surface area, Eads/A, was calculated by multiplying Eads by N/A. For simplicity, the absolute value of the adsorption energy was taken i.e., a positive value corresponds to an exothermic process. Convergence with respect to the seven-layered model was also established.
Using the calculated adsorption energies, we calculate the free energy of adsorption, ΔGads, for every termination as a function of the chemical potential of oxygen in the gas phase with Eq. 2. Here, we assume that the surface is in equilibrium with an oxygen atmosphere that behaves as an ideal gas. The chemical potential of oxygen, ΔμO, represents the ease of oxygen adsorption onto the surface53,55:
We further express ΔμO as a function of both temperature, T, and pressure, p, using Eq. 353:
where kB is the Boltzmann constant and p⊖ is standard pressure (1 atm). \({{\Delta }}{\mu }_{{{{{{{{\rm{O}}}}}}}}}\left(T,{p}^{\ominus }\right)\) was calculated using a polynomial fit, as detailed in Supplementary Equation 1 in Supplementary Note 4, to data for O2 in the NIST thermochemical tables88.
Simulation of core-level BEs
XPS core-level BEs were calculated using the Delta Self-Consistent Field89,90 method by taking the energy difference between two self-consistent Kohn–Sham DFT calculations: the ground-state calculation and the excited core-hole-constrained calculation, where the population of an atom (either carbon or oxygen) was constrained to remove one electron. Both periodic and aperiodic core-hole calculations were performed using the PBE56 XC functional. Periodic calculations were performed using the plane-wave pseudopotential (PP) CASTEP 18.191 software package, with default on-the-fly generated ultrasoft PPs and a plane-wave cut-off of 650 eV. Here, the core-hole was localized through the generation of a modified PP with a core-hole included on the target atom. The energetic contribution of core electrons was accounted for via a correction term when calculating BEs between the ground and excited states92. Supercells of various sizes were constructed to systematically assess BE convergence and the role of finite size effects. Convergence with respect to the 7-layered model was also established. More information regarding the calculations can be found in Supplementary Note 7.
Aperiodic (or cluster) calculations were performed using FHI-aims82,83 with the force_occupation_basis keyword to constrain the core-hole, along with additional basis functions to better describe the core-states, as laid out by Kahk and Lischner (2019)93. The aperiodic calculations were performed on hemispherical cluster models of various phases, cut from their parent periodic models using the Py-ChemShell94 software package. Dangling bonds for all atoms were terminated with hydrogen species, though the XPS calculations were conducted on the central carbon and oxygen atoms. Using a Mulliken analysis95, the density of states of each cluster was compared against its parent periodic model, details of which can be found in Supplementary Note 6. Cluster models, unlike periodic models, allow for the prediction of absolute BEs72,93 and can therefore be used to validate the relative BE shifts calculated using periodic models. Both models provide very similar results in terms of relative BE shifts, which is why once convergence with respect to model size was established72, the majority of calculations were conducted with periodic models via CASTEP.
Surface science experiments
A (110)-oriented single-crystal BDD sample (Element Six Ltd.) of size 5.00 × 5.00 × 0.47 mm3 was homoepitaxially grown via microwave plasma CVD from a (110)-oriented SCD substrate. The growth chamber comprised a ~5% methane and hydrogen gas atmosphere at temperatures of 700–950 ∘C and pressures of 100–200 Torr, with microwave powers of 1–3 kW at 2.45 GHz19. The sample was highly boron-doped8 to low 1020 atoms per cubic centimeter, and boron doping was achieved with the addition of up to 0.02% diborane(6) to the gas phase during CVD growth. A highly boron-doped sample was used to reduce charging effects within the XPS experiments, and the dopant concentration was low enough such that the surface termination of the diamond sample should not be affected96. The sample was removed from the growth substrate via laser micromachining. A small amount of twinning was observed at the edge of the crystal, which both compromises the surface quality and can impact polishing. The twinning was removed by reducing the crystal size to 3.25 × 3.25 × 0.47 mm3 using laser micromachining. To smooth the growth surface, the (110) surface was first mechanically lapped using a resin bonded wheel and then scaife cast iron polished. Prior to any analysis, the sample was acid-cleaned for 30 min at ~200 ∘C in concentrated sulfuric acid saturated with potassium nitrate, rinsed with deionized water, and cleaned again for 30 min at ~200 ∘C in concentrated sulfuric acid23. The sample was finally ultrasonically cleaned for 15 min in deionized water and left to air-dry. All solutions were prepared from Milli-Q water (Millipore Corp.) with a resistivity of 18.2 MΩ cm at 25 ∘C.
The sample was characterized via XRD and LEED; full details for all experimental methods can be found in Supplementary Note 8. To obtain information about the surface roughness and morphology of the post-growth and polished crystal surface, AFM measurements were performed on different locations of the surface using a Bruker Dimension Icon microscope operating in ScanAsystTM mode. The resulting AFM data were processed using the Gwyddion software97.
XP spectra were recorded in an ultra-high vacuum with a 2 × 10−10 mbar base pressure. The sample was illuminated using an XM1000 monochromatic aluminum Kα X-ray source (Omicron NanoTechnology), corresponding to a 1486.7 eV photon energy. Photoelectrons were detected using a Sphera electron analyzer for two different electron emission angles, 0∘ and 60∘ with respect to the surface normal. The spectrometer work function was calibrated using a clean polycrystalline silver sample immediately prior to experiments commencing. The analyzer transmission function was calibrated using clean silver, gold, and copper foils. In order to remove any surface-adsorbed contaminants, the sample was annealed to different temperatures, with XPS measurements taken after every annealing step. An annealing temperature of 500 ∘C was found to be necessary to remove all contaminants whilst preventing decomposition of the surface oxide49, as can be seen in Supplementary Fig. 12. XP spectra were fitted using symmetric pseudo-Voigt profiles98,99, and if several peak components were present in a spectrum, they were restricted to have the same widths and Gaussian–Lorentzian ratios.
Data availability
Input and output files for all calculations have been uploaded as a dataset100 to the NOMAD electronic structure data repository and are freely available under https://doi.org/10.17172/NOMAD/2021.03.01-1.
Code availability
Calculations and analysis have been performed with publicly available or licensed software.
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Acknowledgements
This work was funded by the EPSRC Center for Doctoral Training in Diamond Science and Technology [EP/L015315/1] (S.C.), the EPSRC Center for Doctoral Training in Molecular Analytical Science [EP/L015307/1] (S.J.H.), the Deutsche Forschungsgemeinschaft [KL 3430/1-1] (B.P.K.), the UKRI Future Leaders Fellowship program [MR/T018372/1 and MR/S016023/1] (A.J.L. and R.J.M. respectively) and the EPSRC Engineered Diamond Technologies program [EP/V056778/1] (J.V.M). Computing resources were provided by the Scientific Computing Research Technology Platform of the University of Warwick (including access to Orac and Tinis), the EPSRC-funded HPC Midlands+ consortium [EP/P020232/1] for access to Athena, and the EPSRC-funded High End Computing Materials Chemistry Consortium [EP/R029431/1] for access to the ARCHER UK National Supercomputing Service (https://www.archer.ac.uk) and the ARCHER2 UK National Supercomputing Service (https://www.archer2.ac.uk). The SCD was grown by Nicola Palmer (Element Six Ltd.) and polished by Adam Rathmill (Technical Diamond Polishing Ltd.). XPS and LEED measurements were conducted at the Warwick Photoemission Research Technology Platform, and AFM measurements were conducted at the Electron Microscopy Research Technology Platform of the University of Warwick, with thanks to Pei Zhao (Department of Chemistry, University of Warwick) for Gwyddion analysis. XRD measurements were conducted at the X-Ray Diffraction Research Technology Platform of the University of Warwick by David Walker (Department of Physics, University of Warwick). We also thank Claire Hurley, Steve Hindmarsh, and Mark Newton (Department of Physics, University of Warwick) for helpful discussions during the AFM and XPS measurements. Correspondence to R.J.M. and J.V.M.
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R.J.M. and J.V.M. conceived and designed this research. S.C. and S.J.H. performed all calculations and A.J.L. contributed to the cluster calculations. B.P.K., M.W., and J.V.M. performed the surface science experiments. R.J.M., S.C., S.J.H., B.P.K., and J.V.M. interpreted all the data. S.C., R.J.M., and J.V.M. wrote the manuscript with substantial contributions by S.J.H. and B.P.K. All authors commented on the manuscript.
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Chaudhuri, S., Hall, S.J., Klein, B.P. et al. Coexistence of carbonyl and ether groups on oxygen-terminated (110)-oriented diamond surfaces. Commun Mater 3, 6 (2022). https://doi.org/10.1038/s43246-022-00228-4
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DOI: https://doi.org/10.1038/s43246-022-00228-4
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