Functional Diversity Metrics: How They Are Affected by Landscape Change and How They Represent Ecosystem Functioning in the Tropics
It is generally expected that landscape changes, such as habitat loss and fragmentation, should negatively affect functional diversity metrics, which in turn impact ecosystem functioning. In this review, we search for studies conducted in the tropics and published in the last 10 years to understand how different aspects of landscape change affect functional diversity metrics and how the latter are associated to ecosystem functioning. In total, we found 24 papers that assessed the effects of landscape metrics on functional diversity, evenness, divergence and composition, and although there was a general trend for functional diversity metrics to improve with habitat cover, we found a wide range of responses. Most surprisingly, however, we only found five studies from the tropics assessing the extent to which functional diversity metrics were correlated to measures of ecosystem functioning, and in general, very weak support was found. In conclusion, our results show that it is crucial to first investigate the level to which functional diversity metrics truly represent or may lead to changes in ecosystem functioning, and this is particularly important for animal communities in the tropics. Without such confirmation, there is little reason to pursue further work to reach a consensus regarding how landscape modification affects functional diversity metrics.
KeywordsEcosystem functioning Ecosystem processes Functional diversity Functional traits Tropics
It is unambiguous that habitat loss and fragmentation are leading drivers of the global decline in terrestrial biodiversity ; however, their effects on ecosystem functioning are still debatable [2••, 3]. The impact of landscape alteration on ecosystem functioning has been commonly studied through the prism of functional diversity metrics, as a step away from the simplicity of biodiversity and ecosystem functioning (BEF) approaches, towards the representation of functional traits within a community . Such an approach, however, relies on the assumption that functional diversity metrics and ecosystem processes are strongly associated. Here we review the literature to assess how habitat changes affect functional diversity metrics, and we search for evidence of the extent to which functional trait diversity impacts ecosystem processes.
Functional diversity metrics are calculated by associating species-by-site matrices, such as presence-absence or abundance of species, to the species’ functional traits; i.e. morphological or behavioural traits that are related to the role the species may perform in the ecosystem [5•]. Historically, the first metrics to be used in ecological studies were the richness of functional groups. However, since the seminal work of Petchey and Gaston , functional diversity went on to be measured with an approach similar to that employed for quantifying phylogenetic relatedness, and a wealth of new metrics to assess distinct components of diversity have been produced, such as functional evenness and divergence [7•]. Metrics based on functional traits are direct analogues of community metrics and, similarly to species diversity, functional diversity is the most commonly employed and supposedly the most powerful measure of variation in functional traits [5•, 8].
Here, we reviewed the last 10 years of ecological literature to determine (1) how functional diversity metrics are affected by land cover and measures of landscape configuration and (2) how functional diversity metrics are related to rates of ecosystem processes and ecosystem functions. Our search was restricted to the tropics as they hold a large proportion of worldwide biodiversity , are at high risk from land use change [19, 20] and perform globally important ecosystem functions [21, 22]. We also focused only on terrestrial and riverine systems as landscape configuration is quantified in a different way for large aquatic systems due to its three-dimensional structure .
We searched the Web of Knowledge and Google Scholar for articles published between 2006 and 2016. Searches were conducted in December 2016 and January 2017. Google Scholar searches were continued until two pages in a row (20 records) contained no relevant results.
Published articles on the topic of landscape configuration and functional diversity metrics were selected based on the following search terms: 1. “functional diversity” AND tropic* AND (“patch size” OR “fragment size”), 2. “functional diversity” AND tropic* AND (“habitat connectivity” OR “landscape connectivity” OR “functional connectivity” OR “structural connectivity”), 3. “functional diversity” AND tropic* AND “habitat loss” AND fragment*. Studies were restricted to those that were (1) conducted in the tropics and (2) examined a gradient of landscape fragmentation and (3) made a quantitative assessment of functional diversity.
Similarly, we conducted two searches to find published articles about functional diversity metrics and ecosystem functions using the following set of terms: 1. “functional diversity” AND tropic* AND (“ecosystem service” OR “ecosystem process” OR “ecosystem function”), 2. “functional diversity” AND tropic* AND (“pollination” OR “insectivor*” OR “seed dispersal” OR “decomposition” OR “carbon stocks” OR “nitrogen”). These specific terms were chosen to reflect the primary functions performed by vertebrates, invertebrates and plants within tropical ecosystems.
Functional Diversity Metrics and Landscape Configuration
Table summarising the results of referenced studies comparing functional diversity metrics to landscape metrics
Fragmented vs. reference
Similarity (functional β-diversity)
Fragments vs. continuous forest: The majority of studies detected an increase in functional diversity in continuous habitat in comparison with fragmented [24, 25, 26, 27, 38] (Table 1). Pollination syndromes were more diverse in continuous forest than in fragments [24, 27], and tree seedling assemblages also differed in functional composition between small forest fragments and sites in mature forest . Even when compared to naturally fragmented forest, continuous forest was found to have higher functional richness, evenness and divergence in plant communities . Continuous forests were found to harbour higher functional richness of mammals than riparian fragments . In their pan-tropical study of mammal communities, Ahumada et al.  also found that functional dispersion was higher in continuous forest when compared to fragments. However, this pattern did not hold for other taxa—no differences in functional richness, evenness or dispersion were observed when comparing dung beetle communities between fragments and continuous forest  or when assessing the variation in functional richness of Atlantic Forest avian communities between mature forest and regenerating fragments . While the majority of studies focused on functional measures analogous to α-diversity, Sfair et al.  examined functional β-diversity in plants. They found it to be higher in fragments than old growth forest and highest at fragment edges . This indicates that functional diversity exhibits greater heterogeneity in fragments (especially edges) as opposed to continuous forest, but patterns were less clear when considering only species occurrence as opposed to abundance .
Edge effects: The altered abiotic conditions in edge habitats  can have substantial effects upon community and ecosystem processes [45, 46], and edge effects may even be the cause of many observed area effects . Despite such pervasive impacts, we could not find a consensus regarding their effects on functional diversity metrics (Table 1). The functional evenness of tree communities and diversity of their pollination syndromes were reported to be higher in fragment interiors than edges [11, 27]; however, no changes in richness or divergence were found . No differences were found for forest herpetofauna in forest-oil palm systems when functional richness, evenness and divergence were considered . Overall this suggests that the effect of edges on functional diversity is less clear than the overall effects of fragmentation. Assessing the impacts of patch shape is another approach to understanding the importance of edge effects. This is because as patch shape becomes increasingly irregular, the amount of edge habitat relative to area increases. Patch shape was considered in only two studies, both of which found that more compact patches supported communities with a more diverse array of functions, with higher functional diversity  and divergence .
Patch size: A positive relationship between patch size and functional richness was found for copro-necrophagous beetles , mammals , trees  and vertebrates . Nonetheless, these results did not hold for all plant communities  or birds , in which functional richness was found to vary independently of patch size. Similarly, no effects of patch size were found on functional evenness or divergence of beetle assemblages . In contrast, a negative correlation was reported for patch size and functional divergence in phyllostomid bats  and trees . More complex patterns have been observed, such as a non-linear relationship with patch size .
Habitat amount: Mammal functional richness was positively correlated with forest cover , as was avian functional richness in agricultural and arable landscapes . For bird species in forest fragments, no link between functional richness and forest cover was found and evenness decreased with increasing forest cover; however, functional integrity (similarity to control sites) increased with forest cover [12••]. This suggests a change in species’ functional traits, producing a new functional space that is no less diverse. The functional richness and dispersion of riverine fish communities decreased with increasing forest cover, but evenness remained unaffected and the findings differed dependent on local habitat type . In contrast, some research indicates that the nearest taxon index is negatively associated with forest cover, suggesting forested streams have more functionally complementary fish communities . For trees, a negative correlation was found between functional divergence and natural vegetation cover . These conflicting results may suggest a shift between two communities, both of which are functionally diverse yet distinct. The effect of habitat cover is also highly dependent on scale  and the results may be affected heavily by the gradient examined.
Connectivity: Compared with previous landscape metrics, few studies explicitly examined connectivity. Mammal functional richness was found to correlate positively with connectivity , whereas work on bats indicates that their functional divergence decreased as proximity to other patches increased .
Functional Diversity Metrics and Ecosystem Functioning
We found only five studies published in the last 10 years that quantified functional diversity metrics alongside an independent measure of ecosystem processes in tropical systems. Only two taxa were assessed (birds and plants) and only four functions were measured (seed dispersal, pest control, aboveground biomass and carbon storage). The overall result is that although functional diversity metrics are somehow correlated with ecosystem processes, functional diversity per se is not a good predictor of ecosystem functioning. However, with only five studies, we are unable to draw any firm conclusions or provide any meaningful insight.
Bird functional diversity metrics were shown to be weakly correlated with the provisioning of pest control, but may provide a better proxy for seed dispersal. A meta-analysis of nine avian exclusion studies in tropical coffee and cacao agro-forests compared the predictive power of species richness and functional diversity metrics in determining arthropod predation . Functional richness exhibited a higher degree of correlation with arthropod predation when the metric included multiple traits, highlighting the importance of trait selection when using measures of functional diversity. However, functional group richness was a better predictor of ecosystem functioning than functional diversity metrics, and most importantly, species richness provided the strongest predictive power of all the metrics. Another study investigated how functional diversity related to frugivorous birds’ activity and seed dispersal in different habitats . The proportion of interactions between frugivorous birds and fruit was two times greater in edge habitat than within the forest interior. Functional richness was greater at the forest edge and correlated with the higher number of fruit–bird interactions. Variation in functional richness between the two habitat types was also associated with changes in plant species diversity. However, this study did not include any other measure of seed dispersal, such as seed rain or seed viability; thus, it remains to be confirmed whether greater functional richness of birds does indeed lead to increases in seed dispersal.
In plants, functional dominance has been shown to be a better proxy for carbon storage than functional richness. The role of functional diversity metrics as a determinant of carbon storage was investigated in natural tropical forest in Panama . Functional dominance accounted for most of the variation in carbon storage in natural forest sites. A broader study, encompassing natural tropical forest sites across Africa, Asia and the Americas, reported similar findings . The carbon storage capacity of 11 tropical forests was most strongly correlated with increased functional dominance and taxonomic diversity, but not with functional diversity. However, the study results suggest that the suitability of plant functional diversity indices to predict carbon storage capacity may vary depending on forest type . In a similar study of three neo-tropical forests, aboveground biomass was found to correlate positively with key individual plant functional traits, most significantly with wood specific gravity and maximum adult height. In contrast, there was no relationship between aboveground biomass and functional variety as measured by functional richness, evenness, dispersion and divergence .
It has been generally expected that habitat loss and fragmentation have detrimental effects on functional diversity metrics, which in turn will negatively affect ecosystem functioning (Fig. 1a). Based on current empirical evidence, our results indicate that only some of these expectations are warranted for tropical landscapes. Although the majority of studies reported higher functional diversity or richness in more pristine habitats (Table 1), there was little consensus among studies that investigated additional functional diversity and landscape metrics. There is an even greater lack of clarity regarding the interplay between functional metrics and ecosystem functions, as only five studies with contradictory results were found.
A number of potential issues could be underlying such unmet expectations. It is possible that functional metric patterns are more complex than originally thought due to the idiosyncrasies of individual taxa—bats, for example, often show conflicting patterns when compared to other taxa. There may also be geographic differences, with abiotic and biotic factors unique to a particular site or region, exerting a strong influence on the nature of functional changes. The role of temporal and site-specific differences is starting to be recognised when comparing sensitivity (or response) traits to landscape change [54, 55, 56], and the situation may be similar for functional traits, making generalisation difficult.
Trait choice is of extreme importance for analyses using functional metrics as the inclusion of traits unrepresentative of function, or the exclusion of traits that are functionally important, can both influence the validity of the results [6, 57]. Notwithstanding, studies on similar taxonomic groups most commonly differ in their trait selection [35, 38]. On the other hand, many studies still focus on species richness of functional groups. This is a coarse measure of functional diversity, which is impervious to within-group variation, and has been found to explain less variation in ecosystem functioning than more complex metrics .
Finally, the effects of habitat fragmentation are highly context dependent . The intervening matrix and amount of habitat cover in the region can modify how species respond to patch size and isolation, making it difficult to obtain clear patterns even for simpler metrics such as species abundance and species richness [59, 60]. And in the same way that habitat fragmentation can improve some community metrics (such as beta-diversity), it may also have positive consequences for some functional metrics. For example, Magnago et al.  found functional divergence to decrease with increasing patch size, whereas the majority of authors found an increase with patch size [9, 28, 32, 33]. There are a number of reasons why these results may have been generated. Fragmented landscapes may provide a wider range of habitat types and hence niches—therefore, they may have less niche homogenisation  and contain a community with a more diverse array of traits . Heterogeneous landscapes may support a wider range of species, hence occupying a greater area in trait space. Nonetheless, an increase in functional divergence in fragmented habitats does not necessarily mean that the functions are similar to those performed in pristine habitats and does not mean that ecosystem functioning will be positively impacted.
We were surprised, however, to find such weak evidence supporting the view that functional metrics are correlated to ecosystem functioning or ecosystem dynamics. Not only did we find just five studies, but they failed to show overwhelming support for the use of functional diversity metrics as a proxy of ecosystem functioning. Even species richness, which is a notoriously poor community metric [60, 61, 62], was found to be better than functional richness in predicting the performance of some ecosystem functions. Further research is vital in establishing the link between functional diversity metrics and ecosystem functioning, and there are at least two reasons why this link may not be strong. Firstly, functional metrics are usually only measured from the perspective of one taxon. Such a modular view of ecosystem dynamics likely fails to assess distinct groups that often perform similar functions, and which may show contrasting responses to habitat change (Fig. 1b). A prime example of this occurs in Borneo, where ecosystem functions are maintained across a gradient of habitat disturbance, despite marked declines in key species [2••]. In human-modified habitat, invertebrate groups, such as termites, ants, beetles and earthworms, decrease in abundance [2••]. However, decomposition, seed consumption and invertebrate predation are still performed at the same rates, as vertebrates take up the lead role in those functional groups [2••]. Had these authors only focused on functional diversity of invertebrates, they would have reported a strong decrease in ecosystem functioning. Secondly, there may be situations where functional richness does not vary, but ecosystem functioning is impacted (Fig. 1c). For instance, functional richness of birds in the Atlantic Forest of Brazil does not vary meaningfully, but dietary specialisation is significantly reduced by habitat loss [12••]. Specialist insectivores are believed to have a stronger impact on insect populations than generalist insectivores ; thus, potentially, the strength of arthropod control is diminished in more deforested sites despite absence of variation in functional richness.
Due to the small sample of published articles yielded by the literature search, it is impossible to draw any firm conclusions about the performance and suitability of functional diversity metrics in predicting ecosystem function in tropical landscapes, and this is particularly important for animal taxa. Although a larger pool of studies have been conducted on the effects of landscape change on functional metrics, the picture remains unclear due to the abundance of contrasting results. Although species diversity and functional diversity are clearly correlated (Table S2), the link between functional diversity metrics and landscape change may itself be irrelevant. Unless the association between functional metrics and ecosystem functioning is clearly established, it is more likely that functional diversity is related to ecosystem functioning through a BEF relationship. To fully comprehend which functions species perform within tropical ecosystems, and how this fluctuates with landscape change and configuration, we suggest that further research is needed to establish the connection between landscape changes, functional traits and ecosystem functioning. If these potentially powerful tools are found to be a good proxy for important ecosystem services, the employment of these methods in conservation planning and strategy could be invaluable.
Funding was provided by NERC grant NE/K016393/1 to C.B.L and J.H.H and NERC PhD studentship to M.L.K.H. This paper represents a contribution to the Grand Challenges in the Ecosystem and Environment Initiative of Imperial College.
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On behalf of all authors, the corresponding author states that there is no conflict of interest.
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Article does not contain studies on animals performed by the authors.
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