Abstract
1H NMR spectroscopy in combination with multivariate statistical analysis was applied to explore the metabolic variability in urine and serum of high fat-fed rats relative to normal chow-fed ones. Metabolites contributing to intergroup discrimination identified by partial least squares discriminant analysis include 3-hydroxybutyrate, glutamate, glutamine, citrate, choline, hippurate, alanine, lactate, creatinine, taurine, acetate, etc. The aging effect along with long-term feeding was delineated with metabolic trajectory in principal component analysis score plot and age-related differences on metabolic profiling under different dietary intervention were recognised. The identified metabolites responsible for obesity were all imported into a web tool for network-based interpretation of compound lists to interpret their functional context, molecular mechanisms and disturbed signalling pathway globally and systematically. The results are useful for interpreting the pathology of obesity and further probing into the relationship between dietary-induced obesity and type 2 diabetes mellitus.
Similar content being viewed by others
References
Permana, P. A., Del Parigi, A., & Tataranni, P. A. (2004). Nutrition, 20, 134–138.
Tataranni, P. A., & Ravussin, E. (2002). Handbook of obesity treatment, chapter 3. In T. A. Wadden & A. J. Stunkard (Eds.), Energy metabolism and obesity (pp. 42–72). New York: Guilford Press.
Bouchard, C., & Perusse, L. (1988). Annual Review of Nutrition, 8, 259–277.
Caballero, B. (2007). Epidemiologic Reviews, 29, 1–5.
Zhao, L. C., Zhang, X. D., Wang, H. Y., & Lin, D. H. (2011). Analytical Letters, 44, 1579–1590.
Magnani, L. (2001). Minerva Gastroenterologica e Dietologica, 47, 223–228.
Nicholson, J. K., Lindon, J. C., & Holmes, E. (1999). Xenobiotica, 29, 1181–1189.
Lindon, J. C., Nicholson, J. K., Holmes, E., & Everett, J. R. (2000). Concepts in Magnetic Resonance, 12, 289–320.
Feng, J. H., Liu, H. L., Zhang, L. M., Bhakoo, K., & Lu, L. H. (2010). Nanotechnology, 21, 395101.
Calvani, R., Miccheli, A., Capuani, G., Miccheli, A. T., Puccetti, C., Delfini, M., Iaconelli, A., Nanni, G., & Mingrone, G. (2010). International Journal of Obesity, 34, 1095–1098.
OuYang, D., Xu, J., Huang, H., & Chen, Z. (2011). Applied Biochemistry and Biotechnology, 165, 148–154.
Kim, H. J., Kim, J. H., Noh, S., Hur, H. J., Sung, M. J., Hwang, J. T., Park, J. H., Yang, H. J., Kim, M. S., Kwon, D. Y., & Yoon, S. H. (2011). Journal of Proteome Research, 10, 722–731.
Williams, R., Lenz, E. M., Wilson, A. J., Granger, J., Wilson, I. D., Major, H., Stumpf, C., & Plumb, R. (2006). Molecular BioSystems, 2, 174–183.
Toye, A. A., Dumas, M. E., Blancher, C., Rothwell, A. R., Fearnside, J. F., Wilder, S. P., Bihoreau, M. T., Cloarec, O., Azzouzi, I., Young, S., Barton, R. H., Holmes, E., McCarthy, M. I., Tatoud, R., Nicholson, J. K., Scott, J., & Gauguier, D. (2007). Diabetologia, 50, 1867–1879.
Shearer, J., Duggan, G., Weljie, A., Hittel, D. S., Wasserman, D. H., & Vogel, H. J. (2008). Diabetes, Obesity & Metabolism, 10, 950–958.
Fearnside, J. F., Dumas, M. E., Rothwell, A. R., Wilder, S. P., Cloarec, O., Toye, A., Blancher, C., Holmes, E., Tatoud, R., Barton, R. H., Scott, J., Nicholson, J. K., & Gauguier, D. (2008). PLoS One, 3, e1668.
Kim, S. H., Yang, S. O., Kim, H. S., Kim, Y., Park, T., & Choi, H. K. (2009). Analytical and Bioanalytical Chemistry, 395, 1117–1124.
Waldram, A., Holmes, E., Wang, Y. L., Rantalainen, M., Wilson, I. D., Tuohy, K. M., McCartney, A. L., Gibson, G. R., & Nicholson, J. K. (2009). Journal of Proteome Research, 8, 2361–2375.
Zhang, W., Liu, C. Q., Wang, P. W., Sun, S. Y., Su, W. J., Zhang, H. J., Li, X. J., & Yang, S. Y. (2010). European Journal of Pharmacology, 649, 398–402.
Nicholson, J. K., Foxall, P. J., Spraul, M., Farrant, R. D., & Lindon, J. C. (1995). Analytical Biochemistry, 67, 793–811.
Meiboom, S., & Gill, D. (1958). The Review of Scientific Instruments, 29, 688–691.
Holmes, E., Foxall, P. J. D., Spraul, M., Farrant, R. D., Nicholson, J. K., & Lindon, J. C. (1997). Journal of Pharmaceutical and Biomedical Analysis, 15, 1647–1659.
Aberg, K. M., Alm, E., & Torgrip, R. J. O. (2009). Analytical and Bioanalytical Chemistry, 394, 151–162.
de Meyer, T., Sinnaeve, D., Van Gasse, B., Tsiporkova, E., Rietzschel, E. R., de Buyzere, M. L., Gillebert, T. C., Bekaert, S., Martins, J. C., & van Criekinge, W. (2008). Analytical Chemistry, 80, 3783–3790.
Trygg, J., & Wold, S. (2003). Journal of Chemometrics, 17, 53–64.
Xu, J. J., Yang, S. Y., Cai, S. H., Dong, J. Y., Li, X. J., & Chen, Z. (2010). Analytical and Bioanalytical Chemistry, 396, 1451–1463.
Zhao, L. C., Zhang, X. D., Liao, S. X., Gao, H. C., Wang, H. Y., & Lin, D. H. (2010). Journal of Biomedicine and Biotechnology, 2010, 431894.
van Doorn, M., Vogels, J., Tas, A., van Hoogdalem, E. J., Burggraaf, J., Cohen, A., & van der Greef, J. (2007). British Journal of Clinical Pharmacology, 63, 562–574.
Timbrell, J. A., Seabra, V., & Waterfield, C. J. (1995). General Pharmacology-the Vascular System, 26, 453–462.
He, W., Miao, F. J. P., Lin, D. C. H., Schwandner, R. T., Wang, Z., Gao, J., Chen, J. L., Tian, H., & Ling, L. (2004). Nature, 429, 188–193.
Antonov, A. V., Dietmann, S., Wong, P., & Mewes, H. W. (2009). FEBS Journal, 276, 2084–2094.
Hooper, S. D., & Bork, P. (2005). Bioinformatics, 21, 4432–4433.
Ogata, H., Goto, S., Sato, K., Fujibuchi, W., Bono, H., & Kanehisa, M. (1999). Nucleic Acids Research, 27, 29–34.
Hansen, S. H. (2001). Diabetes/Metabolism Research and Reviews, 17, 330–346.
Tsuboyama-Kasaoka, N., Shozawa, C., Sano, K., Kamei, Y., Kasaoka, S., Hosokawa, Y., & Ezaki, O. (2006). Endocrinology, 147, 3276–3284.
Wu, G. Y., & Morris, S. M. (1998). Biochemical Journal, 336, 1–17.
Garcia-Villafranca, J., Guillen, A., & Castro, J. (2003). Biochemical Pharmacology, 65, 807–812.
Jobgen, W. J., Meininger, C. J., Jobgen, S. C., Li, P., Lee, M. J., Smith, S. B., Spencer, T. E., Fried, S. K., & Wu, G. Y. (2009). Journal of Nutrition, 139, 230–237.
Fu, W. J. J., Haynes, T. E., Kohli, R., Hu, J. B., Shi, W. J., Spencer, T. E., Carroll, R. J., Meininger, C. J., & Wu, G. Y. (2005). Journal of Nutrition, 135, 714–721.
Jobgen, W., Fu, W. J., Gao, H. J., Li, P., Meininger, C. J., Smith, S. B., Spencer, T. E., & Wu, G. Y. (2009). Amino Acids, 37, 187–198.
Tapiero, H., Mathe, G., Couvreur, P., & Tew, K. D. (2002). Biomedicine and Pharmacotherapy, 56, 446–457.
Acknowledgments
This work was supported by the NNSF of China (11074209, 81201143 and 81073113), the Fundamental Research Funds for the Central Universities (2011121046), the Excellent Youth Foundation of Fujian Province (2009D016) and Xiamen Research Platform on Systems Biology of Metabolic Diseases.
Author information
Authors and Affiliations
Corresponding authors
Electronic supplementary material
Below is the link to the electronic supplementary material.
ESM 1
(DOC 885 kb)
Rights and permissions
About this article
Cite this article
Xu, J., Liu, C., Cai, S. et al. Metabolomic Profilings of Urine and Serum from High Fat-Fed Rats via 1H NMR Spectroscopy and Pattern Recognition. Appl Biochem Biotechnol 169, 1250–1261 (2013). https://doi.org/10.1007/s12010-012-0072-3
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s12010-012-0072-3