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Detection of somaclonal variants in somatic embryogenesis-regenerated plants of Vitis vinifera by flow cytometry and microsatellite markers

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Abstract

Flow cytometry and microsatellite analyses were used to evaluate the trueness-to-type of somatic embryogenesis-regenerated plants from six important Spanish grapevine (Vitis vinifera L.) cultivars. Tetraploid plants were regenerated through somatic embryogenesis from all of the cultivars tested with the exception of ‘Merenzao’. In addition, an octoploid plant was obtained in the cv. ‘Albariño’, and two mixoploids in ‘Torrontés’. The most probable origin of these ploidy variations is somaclonal variation. The cv. ‘Brancellao’ presented significantly more polyploids (28.57%) than any other cultivar, but it must be noted that 50% of the adult field-grown ‘Brancellao’ mother plants analysed were mixoploid. Hence, it is probable that these polyploids originated either from somaclonal variation or by separation of genotypically different cell layers through somatic embryogenesis. Microsatellite analysis of somatic embryogenesis-regenerated plants showed true-to-type varietal genotypes for all plants except six ‘Torrontés’ plants, which showed a mutant allele (231) instead of the normal one (237) at the locus VVMD5. There was not a clear relationship between the occurrence of the observed mutant regenerated plants and the callus induction media composition, the developmental stage of the inflorescences, the type of explant used for starting the cultures or the type of germination (precocious in differentiation medium or normal in germination medium) in any of the cultivars tested, except ‘Torrontés’. The mutant plants described herein have been transplanted to soil for future evaluation of putative phenotypic traits of interest. These mutants can be useful both for breeding programs and for functional genomic approaches aimed at increasing knowledge of the biology of grapevine.

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Abbreviations

BA:

6-Benzyladenine

CIM:

Callus induction medium

CV:

Coefficient of variation

DAPI:

4,6-Diamidino-2-phenylindole

2,4-D:

2,4-Dichlorophenoxyacetic acid

DM:

Differentiation medium

FCM:

Flow cytometry

GA3:

Gibberellic acid

IAA:

Indole acetic acid

MS:

Murashige and Skoog

nDNA:

Nuclear DNA

NN:

Nitsch and Nitsch

NOA:

Naphthoxyacetic acid

References

  • Borrego J, De Andrés MT, Gómez JL, Ibáñez J (2002) Genetic study of Malvasía and Torrontés groups through molecular markers. Am J Enol Vitic 53:125–130

    CAS  Google Scholar 

  • Bowers JE, Dangl GS, Vignani R, Meredith CP (1996) Isolation and characterization of new polymorphic simple sequence repeat loci in grape (Vitis vinifera L). Genome 39:628–633. doi:10.1139/g96-080

    Article  CAS  PubMed  Google Scholar 

  • Brown S, Bergounioux C, Tallet S, Marie D (1991) Flow cytometry of nuclei for ploidy and cell cycle analysis. In: Negrutiu I, Gharti-Chherti G (eds) A laboratory guide for cellular and molecular plant biology. Birkhäuser, Basel, pp 326–345

    Google Scholar 

  • Couselo JL, Varela P, Rey M (2006) Effect of benzyladenine concentration and double-phase culture system on in vitro multiplication of adult Albariño plants. Am J Enol Vitic 57:109–112

    CAS  Google Scholar 

  • Doležel J, Sgorbati S, Lucretti S (1992) Comparison of three DNA fluorochromes for flow cytometric estimation of nuclear DNA content in plants. Physiol Plant 85:625–631. doi:10.1111/j.1399-3054.1992.tb04764.x

    Article  Google Scholar 

  • Doležel J, Bartos J, Voglmayr H, Greilhuber J (2003) Nuclear DNA content and genome size of trout and human. Cytometry Part A 51A:127–128. doi:10.1002/cyto.a.10013

    Article  Google Scholar 

  • Endemann M, Hristoforoglu K, Stauber T, Wilhelm E (2001) Assessment of age-related polyploidy in Quercus robur L. somatic embryos and regenerated plants using DNA flow cytometry. Biol Plant 44:339–345. doi:10.1023/A:1012426306493

    Article  Google Scholar 

  • Etienne H, Bertrand B (2003) Somaclonal variation in Coffea arabica: effects of genotype and embryogenic cell suspension age on frequency and phenotype of variants. Tree Physiol 23:419–426. doi:10.1093/treephys/23.6.419

    CAS  PubMed  Google Scholar 

  • Faure O, Nougarède A (1993) Nuclear DNA content of somatic and zygotic embryos of Vitis vinifera cv. Grenache noir at the torpedo stage-flow cytometry and in situ DNA microspectrophotometry. Protoplasma 176:145–150. doi:10.1007/BF01378951

    Article  Google Scholar 

  • Faure O, Aarrouf J, Nougarède A (1996) Ontogenesis, differentiation and precocious germination in anther-derived somatic embryos of grapevine (Vitis vinifera L.)–proembryogenesis. Ann Bot 78:23–28

    Article  Google Scholar 

  • Fernández MP, Núñez Y, Ponz F, Hernáiz S, Gallego FJ, Ibáñez J (2008) Characterization of sequence polymorphisms from microsatellite flanking regions in Vitis spp. Mol Breed 22:455–465. doi:10.1007/s11032-008-9189-z

    Article  Google Scholar 

  • Franks T, He FG, Thomas M (1998) Regeneration of transgenic Vitis vinifera L. Sultana plants: genotypic and phenotypic analysis. Mol Breed 4:321–333. doi:10.1023/A:1009673619456

    Article  CAS  Google Scholar 

  • Franks T, Botta R, Thomas MR, Franks J (2002) Chimerism in grapevines: implications for cultivar identity, ancestry and genetic improvement. Theor Appl Genet 104:192–199. doi:10.1007/s001220100683

    Article  CAS  PubMed  Google Scholar 

  • Gao LZ, Zhang CH, Jia JZ, Dong YS (2002) Assessment of population genetic structure in common wild rice Oryza rufipogon Griff. using microsatellite and allozyme markers. Theor Appl Genet 106:173–180. doi:10.1007/s00122-002-1027-9

    CAS  PubMed  Google Scholar 

  • González-Andrés F, Martín JP, Yuste J, Rubio JA, Arranz C, Ortiz JM (2007) Identification and molecular biodiversity of autochthonous grapevine cultivars in the ‘Comarca del Bierzo’, León, Spain. Vitis 46:71–76

    Google Scholar 

  • Ibáñez J, De Andrés MT, Molino A, Borrego J (2003) Genetic study of key Spanish grapevine varieties using microsatellite analysis. Am J Enol Vitic 54:22–30

    Google Scholar 

  • Kuksova VB, Piven NM, Gleba YY (1997) Somaclonal variation and in vitro induced mutagenesis in grapevine. Plant Cell Tissue Org Cult 49:17–27. doi:10.1023/A:1005830305206

    Article  CAS  Google Scholar 

  • Larkin PJ, Scowcroft WR (1981) Somaclonal variation: a novel source of variability from cell cultures for plant improvement. Theor Appl Genet 60:197–214. doi:10.1007/BF02342540

    Article  Google Scholar 

  • Leal F, Loureiro J, Rodriguez E, Pais MS, Santos C, Pinto-Carnide O (2006) Nuclear DNA content of Vitis vinifera cultivars and ploidy level analyses of somatic embryo-derived plants obtained from anther culture. Plant Cell Rep 25:978–985. doi:10.1007/s00299-006-0162-1

    Article  CAS  PubMed  Google Scholar 

  • Levinson G, Gutman GA (1987) Slipped-strand mispairing: a major mechanism for DNA sequence evolution. Mol Biol Evol 4:203–221

    CAS  PubMed  Google Scholar 

  • Lima MAVA, Paiva A, Candeias MI (2003) Flow cytometry—a simple method for nuclear DNA content evaluation of Vitis vinifera cv. Periquita somatic embryos obtained from anther cultures. Vitis 42:99–100

    Google Scholar 

  • Lodhi MA, Reisch BI (1995) Nuclear DNA content of Vitis species, cultivars, and other genera of the Vitaceae. Theor Appl Genet 90:11–16. doi:10.1007/BF00220990

    Article  CAS  Google Scholar 

  • Lopes T, Pinto G, Loureiro J, Costa A, Santos C (2006) Determination of genetic stability in long-term somatic embryogenic cultures and derived plantlets of cork oak using microsatellite markers. Tree Physiol 26:1145–1152. doi:10.1093/treephys/26.9.1145

    CAS  PubMed  Google Scholar 

  • Lopes T, Capelo A, Brito G, Loureiro J, Santos C (2009) Genetic variability analyses of the somatic embryogenesis induction process in Olea spp. using nuclear microsatellites. Trees 23:29–36. doi:10.1007/s00468-008-0251-6

    Article  CAS  Google Scholar 

  • López M, Cid N, González MV, Cuenca B, Prado MJ, Rey M (2009) Microsatellite and AFLP analysis of autochthonous grapevine cultivars from Galicia (Spain). Am J Enol Vitic 60:215–222

    Google Scholar 

  • Loureiro J, Rodriguez E, Doležel J, Santos C (2007) Two new nuclear isolation buffers for plant DNA flow cytometry: a test with 37 species. Ann Bot 100:875–888. doi:10.1093/aob/mcm152

    Article  CAS  PubMed  Google Scholar 

  • Martín JP, Borrego J, Cabello F, Ortiz JM (2003) Characterization of the Spanish diversity grapevine cultivars using sequence-tagged microsatellite site markers. Genome 46:10–18. doi:10.1139/g02-098

    Article  PubMed  Google Scholar 

  • Martín JP, Santiago JL, Pinto-Carnide O, Leal F, Martínez MC, Ortiz JM (2006) Determination of relationships among autochthonous grapevine varieties (Vitis vinifera L.) in the Northwest of the Iberian Peninsula by using microsatellite markers. Genet Resour Crop Evol 53:1255–1261. doi:10.1007/s10722-005-5679-6

    Article  Google Scholar 

  • Martinelli L, Gribaudo I (2009) Strategies for effective somatic embryogenesis in grapevine: an appraisal. In: Roubelakis-Angelakis KA (ed) Grapevine molecular physiology & biotechnology, 2nd edn. Springer, Dordrecht, pp 461–493

    Google Scholar 

  • Martinelli L, Zambanini J, Grando MS (2004) Genotype assessment of grape regenerants from floral explants. Vitis 43:119–122

    Google Scholar 

  • Marum L, Rocheta M, Maroco J, Oliveira M, Miguel C (2009) Analysis of genetic stability at SSR loci during somatic embryogenesis in maritime pine (Pinus pinaster). Plant Cell Rep 28:673–682. doi:10.1007/s00299-008-0668-9

    Article  CAS  PubMed  Google Scholar 

  • Michaelson M, Price H, Ellison J, Johnston J (1991) Comparison of plant DNA contents determinated by Feulgen microspectrophotometry and laser flow citometry. Am J Bot 78:183–188

    Article  CAS  Google Scholar 

  • Moreno-Sanz P, Suárez B, Loureiro MD (2008) Identification of synonyms and homonyms in grapevine cultivars (Vitis vinifera L.) from Asturias (Spain). J Hortic Sci Biotechnol 83:683–688

    Google Scholar 

  • Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol Plant 15:473–497. doi:10.1111/j.1399-3054.1962.tb08052.x

    Article  CAS  Google Scholar 

  • Nitsch JP, Nitsch C (1969) Haploid plants from pollen grains. Science 163:85–87. doi:10.1126/science.163.3862.85

    Article  CAS  PubMed  Google Scholar 

  • Petersen KK, Hagberg P, Kristiansen K (2003) Colchicine and oryzalin mediated chromosome doubling in different genotypes of Miscanthus sinensis. Plant Cell Tissue Organ Cult 73:137–146. doi:10.1023/A:1022854303371

    Article  Google Scholar 

  • Pinto G, Loureiro J, Lopes T, Santos C (2004) Analysis of the genetic stability of Eucalyptus globulus Labill. somatic embryos by flow cytometry. Theor Appl Genet 109:580–587. doi:10.1007/s00122-004-1655-3

    Article  CAS  PubMed  Google Scholar 

  • Predieri S (2001) Mutation induced and tissue culture in improving fruits. Plant Cell Tissue Organ Cult 64:185–210. doi:10.1023/A:1010623203554

    Article  CAS  Google Scholar 

  • Rose JB, Kubba J, Tobutt KR (2000) Chromosome doubling in sterile Syringa vulgaris × S. pinnatifolia hybrids by in vitro culture of nodal explants. Plant Cell Tissue Organ Cult 63:127–132. doi:10.1023/A:1006472101185

    Article  Google Scholar 

  • Roy AT, Leggett G, Koutoulis A (2001) In vitro tetraploid induction and generation of tetraploids from mixoploids in hop (Humulus lupulus L.). Plant Cell Rep 20:489–495. doi:10.1007/s002990100364

    Article  CAS  Google Scholar 

  • Schellenbaum P, Mohler V, Wenzel G, Walter B (2008) Variation in DNA methylation patterns of grapevine somaclones (Vitis vinifera L.). BMC Plant Biol 8:78. doi:10.1186/1471-2229-8-78

    Article  PubMed  Google Scholar 

  • Wilhelm E, Hristoforoglu K, Fluch S, Burg K (2005) Detection of microsatellite instability during somatic embryogenesis of oak (Quercus robur L.). Plant Cell Rep 23:790–795. doi:10.1007/s00299-004-0891-y

    Article  CAS  PubMed  Google Scholar 

  • Wu JH, Mooney P (2002) Autotetraploid tangor plant regeneration from in vitro Citrus somatic embryogenic callus treated with colchicine. Plant Cell Tissue Organ Cult 70:99–104. doi:10.1023/A:1016029829649

    Article  CAS  Google Scholar 

  • Yang XM, Cao ZY, An LZ, Wang YM, Fang XW (2006) In vitro tetraploid induction via colchicine treatment from diploid somatic embryos in grapevine (Vitis vinifera L.). Euphytica 152:217–224. doi:10.1007/s10681-006-9203-7

    Article  Google Scholar 

  • Yang XM, An LZ, Xiong YC, Zhang JP, Li Y, Xu SJ (2008) Somatic embryogenesis from immature zygotic embryos and monitoring the genetic fidelity of regenerated plants in grapevine. Biol Plant 52:209–214. doi:10.1007/s10535-008-0047-y

    Article  CAS  Google Scholar 

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Acknowledgments

This research was funded by Xunta de Galicia (projects PGIDIT06PXIB310171PR and 2007/030). This paper is a contribution of the Interuniversity Research Group in Biotechnology and Reproductive Biology of Woody Plants. E. Rodriguez was supported by Portuguese FCT (SFRH/BD/27467/2006) fellowships. We thank Jaroslav Doležel (Institute Experimental Botany, Olomouc, Czech Republic) for his generous gift of seeds of Solanum lycopersicum cv. ‘Stupicke’, and Joao Loureiro (Universidade de Coimbra, Portugal) for his help with cytometry analyses. The authors also thank Mª José Graña and Julián Benéitez for their valuable help during plant material collection at the Centro de Formación y Experimentación de Viticultura y Enología de Ribadumia (Pontevedra, Spain), a viticultural facility owned by the regional government of Galicia (Spain).

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Correspondence to Manuel Rey.

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Prado, M.J., Rodriguez, E., Rey, L. et al. Detection of somaclonal variants in somatic embryogenesis-regenerated plants of Vitis vinifera by flow cytometry and microsatellite markers. Plant Cell Tiss Organ Cult 103, 49–59 (2010). https://doi.org/10.1007/s11240-010-9753-1

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