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Are there species flocks in freshwater diatoms? A review of past reports and a look to the future

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Abstract

We review the literature on species flocks in diatoms. Past descriptions of species flocks in diatoms are of few species and do not demonstrate monophyly of the taxa explicitly. The genus Tetralunata, with 19 taxa described from Lake Toba, Indonesia, may be the best example to date of species flocks in freshwater diatoms. Other examples for this group are evaluated, from ancient lakes, river drainages and islands, to more geologically short-lived areas and habitats. Other examples may reside in the Rift Valley lakes of East Africa, Amazonia, lakes Baikal, and Ohrid, and some islands such as New Caledonia, Sulawesi, and Madagascar. It would appear that the phenomenon is not expressed in Hawaii, which has endemic, but very few, species. It is interesting to note that nearly all of the examples of species flocks of extant diatoms are of those groups that possess a raphe system. The role of molecular studies to study species flocks is discussed. Other features not traditionally examined to recognize species-level distinctions (physiology, ecology) which may be useful in the future to help identify species flocks in freshwater diatoms.

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References

  • Akiba, F. & Y. Yanagisawa, 1986. Taxonomy, morphology and phylogeny of the Neogene diatom zonal marker species in the middle-to-high latitudes of the North Pacific. In Kagami, H., D. E. Karig, W. T. Coulbourn, et al. (eds), Initial Reports of the Deep Sea Drilling Project. U.S. Government Printing Office, Washington: 483–554.

    Google Scholar 

  • Albrecht, C., S. Trajanovski, K. Kuhn, B. Streit & T. Wilke, 2006. Rapid evolution of an ancient lake species flock: freshwater limpets (Gastropoda: Ancylidae) in the Balkan Lake Ohrid. Organisms, Diversity & Evolution 6: 294–307.

    Article  Google Scholar 

  • Allcock, A. L. & J. M. Strugnell, 2012. Southern Ocean diversity: new paradigms from molecular ecology. Trends in Ecology & Evolution 27: 520–528.

    Article  Google Scholar 

  • Amato, A., W. H. C. F. Kooistra, J. H. L. Ghiron, D. G. Mann, T. Pröschoid & M. Montresor, 2007. Reproductive isolation among sympatric cryptic species in marine diatoms. Protist 158: 193–207.

    Article  CAS  PubMed  Google Scholar 

  • Annenkova, N. V., G. Hansen, Ø. Moestrup & K. Rengefors, 2015. Recent radiation in a marine and freshwater dinoflagellate species flock. ISME Journal 2015: 1–14.

    Google Scholar 

  • Avise, J. C., 2000. Phylogeography. The history and formation of species. Harvard University Press, Cambridge.

    Google Scholar 

  • Bahls, L. L., 2015. Kurtkrammeria, a new genus of freshwater diatoms (Bacillariophyta, Cymbellaceae) separated from Encyonopsis. Nova Hedwigia 101: 165–190.

    Article  Google Scholar 

  • Baldwin, B. G. & M. J. Sanderson, 1998. Age and rate of diversification of the hawaiian silversword alliance (compositae). Proceedings of the National Academy of Sciences 95: 9402–9406.

    Article  CAS  Google Scholar 

  • Barlow, G. W., 1990. The panoply of Lake Tanganyika cichlids. Environmental Biology of Fishes 27: 235–239.

    Article  Google Scholar 

  • Benson, M. E., J. P. Kociolek, S. A. Spaulding & D. M. Smith, 2012. Pre-neogene (>23.8 MA) biochronology of non-marine diatoms, with an account of the late Eocene flora of the Florissant Formation, central Colorado, USA. Stratigraphy 9: 131–152.

    Google Scholar 

  • Benzing, D. H., 2000. Bromeliaceae: profile of an adaptive radiation. Cambridge University Press, Cambridge.

    Book  Google Scholar 

  • Beszteri, B., É. Acs & L. K. Medlin, 2005. Ribosomal DNA sequences variation among sympatric strains of the Cyclotella meneghiniana complex (Bacillariophyceae) reveals cryptic diversity. Protist 156: 317–333.

    Article  CAS  PubMed  Google Scholar 

  • Bramburger, A. J., G. D. Haffner, P. B. Hamilton, F. Hinz & P. E. Hehanussa, 2006. An examination of species within the genus Surirella from the Malili Lakes, Sulawesi Island, Indonesia, with descriptions of 11 new taxa. Diatom Research 21: 1–56.

    Article  Google Scholar 

  • Bramburger, A. J., P. B. Hamilton, P. E. Hehanussa & G. D. Haffner, 2008. Processes regulating the community composition and relative abundance of taxa in the diatom communities of the Malili Lakes, Sulawesi Island, Indonesia. Hydrobiologia 615: 215–224.

    Article  Google Scholar 

  • Brawand, D., et al., 2014. The genomic substrate for adaptive radiation in African cichlid fish. Nature 513: 375–381.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Bukhtiyarova, L. N. & G. V. Pomazkina, 2013. Bacillariophyta of Lake Baikal. Genera Baikalia, Slavia, Navigeia, Placogeia, Grachevia, Goldfishia, Nadiya, Cymbelgeia, Vol. 1. Lviv Lega-Press, New York.

    Google Scholar 

  • Burliga, A. L., J. P. Kociolek, S. E. Salomoni & D. Figueiredo, 2013. A new genus and species in the diatom Family Eunotioiaceae Kützing (Bacillariophyceae) from the Amazonian hydrographic region, Brazil. Phytotaxa 79: 47–57.

    Article  Google Scholar 

  • Cantonati, M., H. Lange-Bertalot & N. Angeli, 2010. Neidiomorpha gen. nov. (Bacillariophyta): A new freshwater diatom genus separated from Neidium Pfitzer. Botanical Studies 51: 195–202.

    Google Scholar 

  • Chown, S. L., A. Clarke, C. I. Fraser, S. G. Cary, K. L. Moon & M. A. McGeoch, 2015. The changing form of Antarctic biodiversity. Nature 522: 431–438.

    Article  CAS  PubMed  Google Scholar 

  • Clark, A. & I. A. Johnston, 1996. Evolution and adaptive radiation of Antarctica fishes. Tree 11: 1–7.

    Article  Google Scholar 

  • Cleve, P. T., 1894. Synopsis of the naviculoid diatoms, Part I. Kongliga Svenska–Vetenskaps Akademiens Handlingar 26: 1–194.

    Google Scholar 

  • Cocquyt, C., 1998. Diatoms from the northern basin of Lake Tanganyika. Bibliotheca Diatomologica 39: 1–274.

    Google Scholar 

  • Cocquyt, C., 2000. Biogeography and species diversity of diatoms in the Northern Basin of Lake Tanganyika. Advances in Ecological Research 31: 125–150.

    Article  Google Scholar 

  • Cocquyt, C. & R. Jahn, 2005. Rare Surirella taxa (Bacillariophyta) from East Africa described by Otto Müller: typifications, recombinations, new names, annotations and distributions. Willdenowia 35: 359–371.

    Article  Google Scholar 

  • Cocquyt, C. & R. Jahn, 2007a. Surirella nyassae O. Müller, S. malombae O. Mülller, S. chepurnovii Cocquyt & R. Jahn sp. nov. (Bacillariophyta) – typification and variability of three closely related East African diatoms. Nova Hedwigia 84: 529–548.

    Article  Google Scholar 

  • Cocquyt, C. & R. Jahn, 2007b. Surirella engleri O. Müller – a study of its types, infraspecific variability and distribution. Diatom Research 22: 1–16.

    Article  Google Scholar 

  • Cocquyt, C. & R. Jahn, 2007c. Taxa related to Surirella ovalis from Tanzania, East Africa: typification of O. Müller’s taxa and description of a new species. Cryptogamie Algologie 28: 107–116.

    Google Scholar 

  • Cocquyt, C. & R. Jahn, 2007d. Surirella fuellebornii (Bacillariophyta) and related taxa: lectotypification and distribution. Systematics and Geography of Plants 77: 213–228.

    Google Scholar 

  • Cocquyt, C. & W. Ryken, 2016. Afrocymbella barkeri sp. nov. (Bacillariophyta), a common phytoplankton component of Lake Challa, a deep crater lake in East Africa. European Journal of Phycology 51: 217–225.

    Article  Google Scholar 

  • Cocquyt, C., W.-H. Kusber & R. Jahn, 2008. Otto Müller’s Surirella taxa (Bacillariophyta) from East Africa, based on a historical collection kept at the Botanic Garden and Botanical Museum Berlin-Dahlem. Afrika Focus 21: 65–75.

    Google Scholar 

  • Convey, P., 2010. Terrestrial biodiversity in Antarctica – recent advances and future challenges. Polar Science 4: 135–147.

    Article  Google Scholar 

  • Day, J., R. Bills & J. Friel, 2009. Lacustrine radiations in African Synodontis catfish. Journal of Evolutionary Biology 22: 805–817.

    Article  CAS  PubMed  Google Scholar 

  • Degerlund, M., S. Huseby, A. Zingone, D. Sarno & B. Landfald, 2012. Functional diversity in cryptic species of Chaetoceros socialis Lauder (Bacillariophyceae). Journal of Plankton Research 34: 416–431.

    Article  CAS  Google Scholar 

  • Douglas, M. R., P. C. Brunner & L. Bernatchez, 1999. Do assemblages of Coregonus (Teleostei: Salmoniformes) in the central alpine region of Europe represent species flocks? Molecular Ecology 8: 589–603.

    Article  Google Scholar 

  • Duda Jr., T. F. & E. Rolán, 2004. Explosive radiation of Cape Verde Conus, a marine species flock. Molecular Ecology 14: 267–272.

    Article  Google Scholar 

  • Dybowsky, W., 1912. Mollusken aus Uferregion des Baikalsees. Proceedings of Zoological Museum of AS 8: 123–143.

    Google Scholar 

  • Eastman, J. T. & A. R. McCune, 2000. Fishes on the Antarctic continental shelf: evolution of a marine species flock? Journal of Fisheries Biology 57: 84–102.

    Google Scholar 

  • Edlund, M. B. & N. Soninkhishig, 2009. The Navicula reinhardtii species flock (Bacillariophyceae) in ancient Lake Hovsgol, Mongolia: description of four taxa. Nova Hedwigia, Beiheft 135: 239–256.

    Google Scholar 

  • Ehrenberg, C. G., 1832. Über die Entwicklung und Lebensdauer der Infusionsthiere; nebst ferneren Beiträgen zu einer Vergleichung ihrer organischen Systeme. Abhandlungen der Königlichen Akademie der Wissenschaften zu Berlin 1831: 1–154.

    Google Scholar 

  • Esquer-Garrigos, Y. S., 2013. Multi-scale evolutionary analysis of a high altitude freshwater species flock: diversification of the agassizii complex (Orestias, Cyprinodontidae, Teleostei) across the Andean Altiplano. Doctoral Thesis, Museum national D’Histoire Naturella, Paris.

  • Falkowski, P., R. J. Scholes, E. Boyle, J. Canadell, D. Cranfeld, J. Elser, N. Gruber, K. Hibbard, P. Högberg, S. Linder, F. T. Mackenzie, B. Moore, T. Pedersen, Y. Rosenthal, S. Seitzinger, V. Smetacek & W. Steffen, 2000. The global carbon cycle: a test of our knowledge of earth as a system. Science 290: 291–296.

    Article  CAS  PubMed  Google Scholar 

  • Faustová, M., V. Sacherová, H. D. Sheets, J.-E. Svensson & D. J. Taylor, 2010. Coexisting cyclic parthenogens comprise a holocene species flock in Eubosmina. PLoS ONE 5: e11623. doi:10.1371/journal.pone.0011623.

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Fenchel, T. & B. J. Finlay, 2004. The ubiquity of small species: patterns of local and global diversity. Bioscience 54: 777–784.

    Article  Google Scholar 

  • Finlay, B. J., 2002. Global dispersal of free-living microbial eukaryote species. Science 296: 1061–1063.

    Article  CAS  PubMed  Google Scholar 

  • Finlay, B. J. & K. J. Clarke, 1999. Ubiquitous dispersal of microbial species. Nature 400: 828.

    Article  CAS  Google Scholar 

  • Finlay, B. J., E. B. Monaghan & S. C. Maberly, 2002. Hypothesis: the rate and scale of dispersal of freshwater diatom species is a function of their global abundance. Protist 153: 261–273.

    Article  PubMed  Google Scholar 

  • Flower R. J., G. V. Pomazkina, E. Rodionova & D. M. Williams, 2004. Local and meso-scale diversity patterns of benthic diatoms in Lake Baikal. Proceedings of 17th International Diatom Symposium: 69–92.

  • Foged, N., 1971. Diatoms in Thailand. Nova Hedwigia 22: 267–369.

    Google Scholar 

  • Foged, N., 1981. Diatoms in Alaska. Bibliotheca Diatomologica 53: 1–317.

    Google Scholar 

  • Fourtanier, E. & J. P. Kociolek, 2011. Catalogue of Diatom Names. http://research.calacademy.org/research/diatoms/names/index.asp.

  • Frenguelli, J., 1941. Diatomeas del Río de la Plata. Revista del Museo de la Plata, Nueva Serie, Sección Botánica 3: 213–334.

    Google Scholar 

  • Fry, B. & S. C. Wainright, 1991. Diatom sources of 13C-rich carbon in marine food webs. Marine Ecology Progress Series 76: 149–157.

    Article  Google Scholar 

  • Geitler, L., 1977. Zur Entwicklungsgeschichte der Epithemiaceen Epithemia, Rhopalodia und Denticula (Diatomophyceae) und ihre vermutlich symbiotischen Sphäroidkörper. Plant Systematics and Evolution 128: 259–275.

    Article  Google Scholar 

  • Goodman, S. M. & J. P. Benstead, 2004. The Natural History of Madagascar. University of Chicago Press, Chicago.

    Google Scholar 

  • Grant, P., 1999. Ecology and Evolution of Darwin’s Finches. Princeton University Press, Princeton.

    Google Scholar 

  • Greenwood, P. H., 1974. The Cichlid Fishes of Lake Victoria, East Africa: the Biology and Evolution of a Species Flock. British Museum (Natural History), London.

  • Greenwood, P. H., 1984. What is a species flock? In Echelle, A. A. & I. Kornfield (eds), Evolution of Fish Species Flocks. University of Maine at Orono Press, Orono: 13–19.

    Google Scholar 

  • Grunow, A., 1878. Algen und Diatomaceen aus dem Kaspischen Meere. In Schneider, O. (ed.), Naturwissenschafte Beiträge zur Kenntniss der Kaukasusländer, auf Grund seiner Sammelbeute. Burdach, Dresden: 98–132.

    Google Scholar 

  • Haffner, G. D., P. E. Hehanussa & D. Hartoto, 2001. The biology and physical processes of large lakes of Indonesia: Lakes Matano and Towuti. In Munawar, M. & R. E. Hecky (eds), The Great Lakes of the World. Food-web, Health and Integrity. Backhuys Publishers, Leiden: 183–192.

    Google Scholar 

  • Hamsher, S. E., C. L. Graeff, J. G. Stepanek & J. P. Kociolek, 2014. Variation in valve and girdle band morphology in freshwater Denticula (Bacillariophyceae) species: Implications for the systematic position of the genus including the description of Tetralunata gen. nov. (Epithemiaceae, Rhopalodiales). Plant Ecology and Evolution 147: 346–365.

    Article  Google Scholar 

  • Hamsher, S. E. & G. W. Saunders, 2014. A floristic survey of marine tube-forming diatoms reveals unexpected diversity and extensive co-habitation among genetic lines of the Berkeleya rutilans complex (Bacillariophyceae). European Journal of Phycology 49: 47–59.

    Article  Google Scholar 

  • Harwood, D. M., 1999. Diatomite. In Stoermer, E. F. & J. P. Smol (eds), The Diatoms: Applications for the Environmental and Earth Sciences. Cambridge University Press, Cambridge.

    Google Scholar 

  • Herder, F., A. W. Nolte, J. Pfaender, J. Schwarzer, R. K. Hadiaty & U. K. Schliewen, 2006. Adaptive radiation and hybridization in Wallace’s dreamponds: evidence from sailfin silversides in the Malili lakes of Sulawesi. Proceedings of the Royal Society of London B 273: 2209–2217.

    Article  Google Scholar 

  • Herder, F., J. Pfaender & U. K. Schliewen, 2008. Adaptive sympatric speciation of polychromatic “roundfin” sailfin silverside fish in Lake Matano (Sulawesi). Evolution 62: 2178–2195.

    Article  PubMed  Google Scholar 

  • Hodges, S. A. & M. L. Arnold, 1994. Columbines: A geographically widespread species flock. Proceedings of the National Academy of Sciences of the United States of America 91: 5129–5132.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Hoffmann, N., K. Reicherter, T. Fernández-Steeger & C. Grützner, 2010. Evolution of ancient Lake Ohrid: a tectonic perspective. Biogeosciences 7: 3377–3386.

    Article  Google Scholar 

  • Hustedt, F., 1927. Bacillariales aus dem Aokikosee in Japan. Archiv Für Hydrobiologie 18: 155–172.

    Google Scholar 

  • Hustedt, F., 1928. Die Kieselalgen Deutschlands, Österreichs und der Schweiz unter Berücksichtigung der übrigen Länder Europas sowie der angrenzenden Meeresgebiete. In Rabenhorst, L. (ed.), Kryptogamenflora von Deutschland, Österreich und der Schweiz, Vol. 1. Akademische Verlagsgesellschaft, Leipzig: 273–464.

    Google Scholar 

  • Hustedt, F., 1930. Bacillariophyta (Diatomeae). In Pascher, A. (ed.), Die Süsswasser-Flora Mitteleuropas, Zweite Auflage, Zweite ed. Gustav Fischer, Jena.

    Google Scholar 

  • Hustedt, F., 1937–1938. Systematische und ökologie Untersuchungen über die Diatomeen-Flora von Java, Bali und Sumatra nach dem Material der Deutsche Limnologischen Sunda-Expedition. Archiv für Hydrobiologie, Supplement 15: 131–506.

  • Hustedt, F., 1942. Susswasser-Diatomeen des indomalayischen Archipels und der Hawaii-Inseln. Internationale Revue der gesamten Hydrobiologie und Hydrographie 42: 1–252.

    Article  Google Scholar 

  • Hustedt, F., 1964. Die Kieselalgen Deutschlands, Österreichs und der Schweiz unter Berücksichtigung der übrigen Länder Europas sowie der angrenzenden Meeresgebiete. In Rabenhorst, L. (ed.), Kryptogamen Flora von Deutschland, Österreich und der Schweiz. Akademische Verlagsgesellschaft m.b.h, Leipzig: 557–816.

    Google Scholar 

  • Hustedt, F., 1965. Neue und wenig bekannte diatomeen. IX. Süßwasserdiatomeen aus Brasilien, insbesondere des Amazonasgebietes. Internationale Revue der gesamten Hydrobiologie 50: 391–410.

    Article  Google Scholar 

  • Johns, G. C. & J. C. Avise, 1998. Test for ancient species flocks based on molecular phylogenetic appraisals of Sebastes rockfishes and other marine fishes. Evolution 52: 1135–1146.

    Article  Google Scholar 

  • Jüttner, I., K. Krammer, B. Van de Vijver, A. Tuji, B. Simkhada, S. Gurung & E. J. Cox, 2010. Oricymba (Cymbellales, Bacillariophyceae), a new cymbelloid genus and three new species from the Nepalese Himalaya. Phycologia 49: 407–423.

    Article  Google Scholar 

  • Karthick, B., P. B. Hamilton & J. P. Kociolek, 2012. Taxonomy and biogeography of some Surirella Turpin (Bacillariophyceae) taxa from peninsular India. Nova Hedwigia, Beihefte 141: 81–116.

    Google Scholar 

  • Karthick, B. & J. P. Kociolek, submitted. The earliest freshwater gomphonemoid diatoms (Bacillariophyceae: Cymbellales, Gomhonemataceae): a new freshwater gomphoenmoid diatom genus from India, with the description of a new species from the Eastern Ghats. Systematic Botany.

  • Katsev, S., S. A. Crowe, A. Mucci, B. Sundby, S. Nomosatryo, G. D. Haffner & D. A. Fowle, 2010. Mixing and its effects on biogeochemistry in the persistently stratified, deep, tropical Lake Matano, Indonesia. Limnology and Oceanography 55: 763–776.

    Article  CAS  Google Scholar 

  • Kavulic, K. J. & J. P. Kociolek, 2014. A morphological investigation of Neidium temperei Reimer (Bacillariophyta), and a consideration of its systematic placement. Diatom Research 29: 175–181.

    Article  Google Scholar 

  • Kelly J. R., C. S. Davis & S. J. Cibik, 1998. Conceptual food web model for Cape Cod Bay, with associated environmental interactions. Boston: Massachusetts Water Resources Authority. Report ENQUAD 98–04.

  • Kermarrec, L., L. Ector, A. Bouchez, F. Rimet & L. Hoffmann, 2011. A preliminary phylogenetic analysis of the Cymbellales based on 18S rDNA gene sequencing. Diatom Research 26: 305–315.

    Article  Google Scholar 

  • Khursevich, G. K. & G. P. Chernyaeva, 1989. Ectodictyonaceae – new family of the class Centrophyceae. Botanischki Zhurnal 74: 1034–1035.

    Google Scholar 

  • Khursevich, G. K. & G. L. Chernyaeva, 1994. A new species of the genus Concentrodiscus (Bacillariophyta) from the Miocene deposits of the Transbaikal region. Botanicheskii Zhurnal 79: 107–109.

    Google Scholar 

  • Khursevich, G. K. & S. L. VanLandingham, 1995. Morphology and stratigraphy of some Mesodictyon species (Bacillariophyta) from upper Miocene freshwater deposits of Idaho and Nevada, USA. Nova Hedwigia 60: 467–478.

    Google Scholar 

  • Khursevich, G. K. & S. A. Fedenya, 2006. Morphology of new freshwater species of Actinocyclus (Bacillariophyta) from the upper Miocene sediments of Lake Baikal, Siberia. Algologia 16: 384–394.

    Google Scholar 

  • Khursevich, G. K. & J. P. Kociolek, 2012. A preliminary, worldwide inventory of the extinct, freshwater fossil diatoms from the orders Thalassiosirales, Stephanodiscales, Paraliales, Aulacoseirales, Melosirales, Coscindiscales, and Biddulphiales. Nova Hedwigia Beihefte 141: 315–364.

    Google Scholar 

  • Khursevich, G. K., S. A. Fedenya, E. B. Karabanov, D. F. Williams & M. I. Kuzmin, 2000. Stephanopsis Khursevich et Fedenya – new genus of class Centrophyceae (Bacillariophyta) from the Pliocene deposits of Lake Baikal (Russia). Algologia 10: 106–109.

    Google Scholar 

  • Khursevich, G. K., J. P. Kociolek, T. Iwashita, S. A. Fedenya, M. I. Kuzmin, T. Kawai, D. F. Williams, E. B. Karabanov, A. A. Prokopenko & K. Minoura, 2004. Mesodictyopsis Khursevich, Iwashita, Kociolek & Fedenya – new genus of class Centrophyceae (Bacillariophyta) from Upper Miocene sediments of Lake Baikal, Siberia. Proceedings of the California Academy of Sciences 55: 336–355.

    Google Scholar 

  • Kociolek, J. P. & S. E. Hamsher, 2016. Diatoms: by, with and as endosymbionts. In Grube, M., J. Seckbach & L. Muggia (eds), Algae and Cyanobacteria Symbiosis. McGraw-Hill, New York.

    Google Scholar 

  • Kociolek, J. P. & J. C. Kingston, 1999. Taxonomy, ultrastructure and distribution of gomphonemoid diatoms (Bacillariophyceae: Gomphonemataceae) from rivers of the United States. Canadian Journal of Botany 77: 686–705.

    Article  Google Scholar 

  • Kociolek, J. P. & K. Rhode, 1998. Raphe vestiges in “Asterionella” species from Madagascar: Evidence for a polyphyletic origin of the araphid diatoms? Cryptogamie Algologie 19: 57–74.

    Google Scholar 

  • Kociolek, J. P. & B. H. Rosen, 1984. Observations on North American Gomphoneis (Bacillariophyceae). I. Valve ultrastructure of G. mammilla with comment on the taxonomic status of the genus. Journal of Phycology 20: 361–368.

    Article  Google Scholar 

  • Kociolek, J. P. & E. F. Stoermer, 1986. Observations on North American Gomphoneis (Bacillariophyceae). II. Descriptions and ultrastructure of two new species. Transactions of the American Microscopical Society 105: 141–151.

    Article  Google Scholar 

  • Kociolek, J. P. & E. F. Stoermer, 1987. Ultrastructure of Cymbella sinuata (Bacillariophyceae) and its allies, and their transfer to Reimeria, gen. nov. Systematic Botany 12: 451–459.

    Article  Google Scholar 

  • Kociolek, J. P. & E. F. Stoermer, 1988a. A preliminary investigation of the phylogenetic relationships of the freshwater, apical pore field-bearing cymbelloid and gomphonemoid diatoms (Bacillariophyceae). Journal of Phycology 24: 377–385.

    Article  Google Scholar 

  • Kociolek, J. P. & E. F. Stoermer, 1988b. Taxonomy, ultrastructure, and distribution of Gomphoneis herculeana, G. eriense and closely related species. Proceedings of the Academy of Natural Sciences of Philadelphia 140: 24–97.

    Google Scholar 

  • Kociolek, J. P. & E. F. Stoermer, 1988c. Observations on North American Gomphoneis (Bacillariophyceae). IV. Ultrastructure and distribution of Gomphoneis elegans. Transactions of the American Microscopical Society 107: 386–396.

    Article  Google Scholar 

  • Kociolek, J. P. & E. F. Stoermer, 1989. Phylogenetic relationships and evolutionary history of the diatom genus Gomphoneis. Phycologia 28: 438–454.

    Article  Google Scholar 

  • Kociolek, J. P. & E. F. Stoermer, 1990. Diatoms from the Upper Miocene Hot Springs Limestone, SnakeRiver Plain, Idaho (U.S.A.). Micropaleontology 26: 331–352.

    Article  Google Scholar 

  • Kociolek, J. P. & E. F. Stoermer, 1993a. Freshwater gomphonemoid diatom phylogeny: Preliminary results. Hydrobiologia 269(270): 31–38.

    Article  Google Scholar 

  • Kociolek, J. P. & E. F. Stoermer, 1993b. The diatom genus Gomphocymbella O. Müller: Taxonomy, ultrastructure and phylogenetic relationships. Nova Hedwigia, Beihefte 106: 71–91.

    Google Scholar 

  • Kociolek, J. P., D. Lyon & S. A. Spaulding, 2001. Revision of the South American species of Actinella Lewis. In Jahn, R., J. P. Kociolek, A. Witkowski & P. Compere (eds), Lange-Bertalot Festschrift. Studies on Diatoms. Dedicated to Prof. Dr. h.c. Horst Lange-Bertalot on the Occasion of his 65th Birthday. Gantner, Ruggell: 131–166.

    Google Scholar 

  • Kociolek, J. P., S. A. Spaulding, K. Sabbe & W. Vyverman, 2004. New Gomphonema Ehrenberg (Bacillariophyta) species from Tasmania. Phycologia 43: 427–444.

    Article  Google Scholar 

  • Kociolek, J. P., M. S. Kulikovskiy & C. N. Solak, 2013. The diatom genus Gomphoneis Cleve (Bacillariophyceae) from Lake Baikal, Russia. Phytotaxa 154: 1–37.

    Article  Google Scholar 

  • Kociolek, J. P., E. C. Theriot, D. M. Williams, M. Julius, E. F. Stoermer & J. C. Kingston, 2015. Centric and araphid diatoms. In: Wehr, J., R. Sheath & J.P. Kociolek (eds), Freshwater Algae of North America, Chap. 15, 2nd Edn. New York: Academic Press: 651–706.

    Google Scholar 

  • Kociolek, J. P., J. C. Woodward & C. Graeff, 2016. New and endemic Gomphonema C.G. Ehrenberg (Bacillariophyceae) species from Hawaii. Nova Hedwigia 102: 141–171.

    Article  Google Scholar 

  • Kociolek, J. P., K. Kopalova, S. E. Hamsher, T. Kohler, B. Van de Vijver, P. Convey & D. McKnight, 2016. An extreme case of endemism in Antarctica: the freshwater diatom genus Luticola. Polar Biology.

  • Kontula, T., S. V. Kirilchik & R. Väinölö, 2003. Endemic diversification of the monophyletic cottoid fish species flock in Lake Baikal explored with mtDNA sequencing. Molecular Phylogenetics and Evolution 27: 143–155.

    Article  CAS  PubMed  Google Scholar 

  • Kottelat, M., 1991. Sailfin silversides (Pisces: Telmatherinidae) of Lake Matano, Sulawesi, Indonesia, with descriptions of six new species. Ichthyological Exploration of Freshwaters 1: 321–344.

    Google Scholar 

  • Krammer, K., 1997a. Die cymbelloiden Diatomeen – Eine Monographie der weltweit bekannten Taxa. Teil 1. Allgemeines und Encyonema Part. Bibliotheca Diatomologica 36: 1–382.

    Google Scholar 

  • Krammer, K., 1997b. Die cymbelloiden Diatomeen. Ein Monographie der weltweit bekannten Taxa. Teil 2. Encyonema part, Encyonopsis and Cymbellopsis. Bibliotheca Diatomologica 36: 1–463.

    Google Scholar 

  • Krammer, K., 2002. Cymbella. Diatoms of Europe 3: 1–584.

    Google Scholar 

  • Krammer, K., 2003. Cymbopleura, Delicata, Navicymbula, Gomphocymbellopsis, Afrocymbella. Diatoms of Europe 4: 1–529.

    Google Scholar 

  • Krammer, K. & H. Lange-Bertalot, 1985. Naviculaceae Neue und wenig bekannte Taxa, neue Kombinationen und Synonyme sowie Bemerkungen zu einigen Gattungen. Bibliotheca Diatomologica 9: 5–230.

    Google Scholar 

  • Krammer, K. & H. Lange-Bertalot, 1986. Bacillariophyceae 2. Teil: Bacillariophyceae, Naviculaceae. In Ettl H, J. Gerloff, H. Heynig, D. Mollenhauer (eds), Süsswasserflora von Mitteleuropa, Band 2/1. G. Fischer Verlag, Jena.

  • Krammer, K. & H. Lange-Bertalot, 1987. Morphology and taxonomy of Surirella ovalis and related taxa. Diatom Research 2: 77–95.

    Article  Google Scholar 

  • Krammer K. & H. Lange-Bertalot, 1988. Bacillariophyceae 2. Teil: Bacillariophyceae, Epithemiaceae, Surirellaceae. In Ettl H, J. Gerloff, H. Heynig, D. Mollenhauer (eds), Süsswasserflora von Mitteleuropa, Band 2/2. G. Fischer Verlag, Stuttgart & New York.

  • Kulikovskiy, M. S., H. Lange-Bertalot, D. Metzeltin & A. Witkowski, 2012. Lake Baikal: hotspot of endemic diatoms. Iconographia Diatomologica 23: 1–686.

    Google Scholar 

  • Kulikovskiy, M., E. Gusev, S. Andreeva & N. Annenkova, 2014. Phylogenetic position of the diatom genus Geissleria Lange-Bertalot & Metzeltin and description of two new species from Siberian mountain lakes. Phytotaxa 177: 249–260.

    Article  Google Scholar 

  • Kulikovskiy, M. S., A. Glushchenko & J. P. Kociolek, 2015a. The diatom genus Oricymba in Vietnam and Laos with description of one new species and a consideration of its systematic position. Phytotaxa 227: 120–134.

    Article  Google Scholar 

  • Kulikovskiy, M. S., H. Lang-Bertalot & I. V. Kuznetsova, 2015b. Lake Baikal: hotspot of endemic diatoms: II. Iconographia Diatomologica 26: 1–656.

    Google Scholar 

  • Kulikovskiy, M. S. H., A. Lange-Bertalot, G. K. Witkowski, J. P. Khursevich & P. Kociolek, 2015c. Eunotia species (Bacillariophyta) new to science from Lake Baikal with comments on morphology and biogeography of the genus. Phycologia 54: 248–260.

    Article  Google Scholar 

  • Lange-Bertatlot, H. & D. Metzeltin, 1996. Indicators of oligotrophy – 800 taxa representative of three ecologically distinct lake types, Carbonate buffered – Oligodystrophic – Weakly buffered soft water. Iconographia Diatomologica 2: 1–390.

    Google Scholar 

  • Lange-Bertalot, H. & G. Moser, 1994. Brachysira. Monographie der Gattung. Bibliotheca Diatomologica 29: 1–212.

    Google Scholar 

  • Lange-Bertalot, H. & R. Simonsen, 1978. A taxonomic revision of the Nitzschia lanceolatae Grunow. Bacillaria 1: 11–112.

    Google Scholar 

  • Lange-Bertalot, H., P. Cavacini, N. Tagliaventi & S. Alfinito, 2003. Diatoms of Sardinia. Rare and 76 new species in rock pools and other ephemeral waters. Iconographia Diatomologica 12: 1–438.

    Google Scholar 

  • Lecointre, G., N. Améziane, M-C. Boisselier, C. Bonillo, F. Busson, R. Causse, A. Chenuil, A. Couloux, J-P. Coutaneau, C. Cruaud, C. d’Udekem d’Acoz, C. De Ridder, G. Denys, A. Dettaï, G. Duhamel, M. Eléaume, J-P. Féeral, C. Gallut, C. Havermans, C. Held, L. Hemery, A-C. Lautredou, P. Martin, C. Ozouf-Costaz, B. Pierrat, P. Pruvost, N. Puillandre, S. Samadi, T. Saucede, C. Schubart & B. David, 2013. Is the species flock concept operational. The Antarctic shelf case. PLoS ONE 8: e68787.

  • Lefebvre, K. A. & A. Robertson, 2010. Domoic acid and human exposure risks: a review. Toxicon 56: 218–230.

    Article  CAS  PubMed  Google Scholar 

  • Levkov, Z. & D. M. Williams, 2011. Fifteen new diatom (Bacillariophyta) species from Lake Ohrid, Macedonia. Phytotaxa 30: 1–41.

    Article  Google Scholar 

  • Levkov, Z., S. Krstic, D. Metzeltin & T. Nakov, 2007. Diatoms of Lakes Prespa and Ohrid. About 500 taxa from ancient lake system. Iconographia Diatomologica 16: 1–613.

    Google Scholar 

  • Levkov, Z., D. Metzeltin & A. Pavlov, 2013. Luticola and Luticolopsis. Diatoms of Europe 7: 1–698.

    Google Scholar 

  • Levkov, Z., D. Mitić-Kopanja & E. Reichardt, 2016. The diatom genus Gomphonema from the Republic of Macedonia. Diatoms of Europe 8: 1–552.

    Google Scholar 

  • Liem, K., 1974. Evolutionary strategies and morphological innovations: cichlid pharyngeal jaws. Systematic Zoology 22: 425–441.

    Article  Google Scholar 

  • Liu, Q., J. P. Kociolek, B. Li, Q. You, & Q. Wang, in press. The diatom genus Neidium Pfitzer (Bacillariophyceae) from Zoige Wetland, China. Bibliotheca Diatomologica.

  • Lowe, R. L., A. R. Sherwood & J. R. Ress, 2009. Freshwater species of Achnanthes Bory from Hawaii. Diatom Research 24: 327–340.

    Article  Google Scholar 

  • Lowe, R. L., J. P. Kociolek & B. Van de Vijver, 2013. Two new Orthoseira species (Bacillariophyceae) from lava tubes. Phytotaxa 111: 39–52.

    Article  Google Scholar 

  • Lowe, R. L., J. P. Kociolek, J. R. Johansen, B. Van de Vijver, H. Lange-Bertalot & K. Kopalova, 2014. Humidophila gen. nov., a new genus for a group of diatoms (Bacillariophyta) formerly within the genus Diadesmis: species from Hawai’i, including one new species. Diatom Research 29: 351–360.

    Article  Google Scholar 

  • Main, S. P., 2003. Diprora haenaensis gen. et sp. nov., a filamentous, pseudoaerial, araphid diatom from Kaua’i (Hawaiian Islands). Diatom Research 18: 259–272.

    Article  Google Scholar 

  • Maillard, R., 1978. Contribution a la connaissance de la diatomées d’eau douce da la Nouvelle-Calédonie. ORSTOM, Series Hydrobiologie 12: 143–172.

    Google Scholar 

  • Mann, D. G., 1999. The species concept in diatoms. Phycologia 38: 437–495.

    Article  Google Scholar 

  • Martens, K. & I. Schön, 1999. Crustacean biodiversity in ancient lakes: a review. Crustaceana 72: 899–910.

    Article  Google Scholar 

  • McCartney, M. A., J. Acevedo, C. Heredia, C. Rico, B. Quenoville, E. Bermingham & W. O. McMilland, 2003. Genetic mosaic in a marine species flock. Molecular Ecology 12: 2963–2973.

    Article  CAS  PubMed  Google Scholar 

  • McCune, A. R., 1987. Toward the phylogeny of a fossil species flock: Seminotid fishes from a lake deposit in the Early Jurassic Towaco Formation, Newark Basi. Bulletin of the Peabody Museum of Natural History 43: 1–108.

    Google Scholar 

  • Mereschkowsky, C., 1903. Le types de l’endochrome chez les diatomées. Botanicheskiia Zapiski 21: 1–193.

    Google Scholar 

  • Metzeltin, D. & H. Lange-Bertalot, 1998. Tropical diatoms of South America I: about 700 predominantly rarely known or new taxa representative of the neotropical flora. Iconographia Diatomologica 5: 1–695.

    Google Scholar 

  • Metzeltin, D. & H. Lange-Bertalot, 2002. Diatoms from the “island continent” Madagascar. Iconographia Diatomologica 11: 1–286.

    Google Scholar 

  • Metzeltin, D. & H. Lange-Bertalot, 2007. Tropical diatoms of South America II. Special remarks on biogeography disjunction. Iconographia Diatomologica 18: 1–877.

    Google Scholar 

  • Metzeltin, D., H. Lange-Bertalot & N. Soninkhisig, 2009. Diatoms in Mongolia. Iconographia Diatomologica. 20: 1–702.

    Google Scholar 

  • Meyer, A., 1993. Phylogenetic relationships and evolutionary processes in East African cichlid fishes. Tree 8: 279–284.

    CAS  PubMed  Google Scholar 

  • Moisseeva, A. I. & T. L. Nevretdinova, 1990. Novye semeistvo i rod presnovodnykh vodoroslei (Bacillariophyta). Botanicheskii Zhurnal 75: 539–544.

    Google Scholar 

  • Moser, G., A. Steindorf & H. Lange-Bertalot, 1995. Neukaledonien. Diatomeenflora einer Tropeninsel. Revision der Collection Maillard und Untersuchung neuen Materials. Bibliotheca Diatomologica 32: 1–340.

    Google Scholar 

  • Müller, O., 1903. Bacillariaceen aus dem Nyassalande und einigen benachbarten Gebieten. I. Botanische Jahrbücher 34: 9–38.

    Google Scholar 

  • Müller, O., 1904. Bacillariaceen aus dem Nyassalande und einigen benachbarten Gebieten. II. Botanische Jahrbücher 34: 256–301.

    Google Scholar 

  • Müller, O., 1905a. Bacillariaceen aus dem Nyassaland und einigen benachbarten Gebieten. III Folge, Naviculoideae-Naviculeae-Gomphoneminae-Gomphocymbellinae-Cymbellinae. Nitzschioideae-Nitzschieae. Botanische Jahrbucher fur Systematik, Pflanzengeschichte, und Pflanzengeographie. Leipzig 36: 137–206.

    Google Scholar 

  • Müller, O., 1905b. Bacillariaceen aus dem Nyassalande und einigen benachbarten Gebieten. III. Botanische Jahrbücher 36: 137–205.

    Google Scholar 

  • Müller, O., 1912. Bacillariaceen aus dem Nyassalande und einigen benachbarten Gebieten. IV. Botanische Jahrbücher 34: 69–122.

    Google Scholar 

  • Nakov, T., E. C. Ruck, Y. Galachyants, S. A. Spaulding & E. C. Theriot, 2014. Molecular phylogeny of the Cymbellales (Bacillariophyceae, Heterokontophyta) with a comparison of models for accommodating rate variation across sites. Phycologia 53: 359–373.

    Article  Google Scholar 

  • Okuno, H., 1974. Diatomeenshalen im elektronenmikroskopischen Bild, Teil IX. In Helmcke, J.-G., W. Krieger & J. Gerloff (eds), Freshwater Diatoms. J. Cramer, Vaduz.

    Google Scholar 

  • Otte, D., 1994. The Crickets of Hawaii: Origin, Systematics and Evolution. Academy of Natural Sciences, Philadelphia.

    Google Scholar 

  • Paddock, T. B. B., 1978. Observations on the valve structures of diatoms of the genus Plagiodiscus and on some associated species of Surirella. Botanical Journal of the Linnean Society 76(1): 1–25.

    Article  Google Scholar 

  • Paddock, T. B. B., 1985. Observations and comments on the diatoms Surirella fastuosa and Campylodiscus fastuosus and on other species of similar appearance. Nova Hedwigia 41: 417–444.

    Google Scholar 

  • Parham, J. E., G. R. Higashi, E. K. Lapp, D. G. K. Kuamo’o, R. T. Nishimoto, S. Hau, J. M. Fitzsimmons, D. A. Polhemus & W. S. Devick, 2008. Atlas of Hawaiian Watersheds and Their Aquatic Resources. http://www.hawaiiwatershedatlas.com/index.html. Accessed 8 July 2014.

  • Park, J. S. & J. H. Lee, 2014. Description of the pseudocryptic species Conticribra weissflogiopsis sp. nov. (Thalassiosirales, Bacillariophyta) isolated from brackish waters in Korea, based on its cingulum structure and molecular analysis. Phytotaxa 191: 172–176.

    Article  Google Scholar 

  • Patrick, R. M., 1968. The structure of diatom communities in similar ecological conditions. American Naturalist 102: 175–183.

    Article  Google Scholar 

  • Patrick, R., & C. W. Reimer, 1966. The diatoms of the United States, Exclusive of Alaska and Hawaii, Vol. 1. Monographs of the Academy of Natural Sciences of Philadelphia, Philadelphia: 13.

  • Patrick R. & C. W. Reimer, 1975. The diatoms of the United States, Exclusive of Alaska and Hawaii, Vol. 2, part 1. Monographs of The Academy of Natural Sciences of Philadelphia, Philadelphia: 13.

  • Pfaender, J., U. K. Schliewen & F. Herder, 2010. Phenotypic traits meet patterns of resource use in the radiation of “sharpfin” sailfin silverside fish in Lake Matano. Evolutionary Ecology 24: 957–974.

    Article  Google Scholar 

  • Poulickova, A., J. Vesela, J. Neustupa & P. Skaloud, 2010. Pseudocryptic diversity versus cosmopolitanism in diatoms: a case study on Navicula cryptocephala Kütz. (Bacillariophyceae) and morphologically similar taxa. Protist 161: 353–369.

    Article  PubMed  Google Scholar 

  • Pratt, H. D., 2003. The Hawaiian Honeycreepers: Drepanidinae. Oxford University Press, Oxford.

    Google Scholar 

  • Raupach, M., M. Malyutina, A. Brandt & J. Wägele, 2007. Molecular data reveal a highly diverse species flock within the munnopsoid deep-sea isopod Betamorpha fusiformis (Barnard, 1920) (Crustacea: Isopoda: Asellota) in the Southern Ocean. Deep Sea Research Part II: Topical Studies in Oceanography 54: 1820–1830.

    Article  Google Scholar 

  • Reichardt, E., 1999. Zur Revision der Gattung Gomphonema. Die Arten um G. affine/insigne, G. angustatum/micropus, G. acuminatum sowie gomphonemoide Diatomeen aus dem Oberoligozän in Böhmen. Iconographia Diatomologica 8: 1–203.

    Google Scholar 

  • Reichardt, E., 2005. Die Identität von Gomphonema entolejum Østrup (Bacillariophyceae) sowie Revision ähnlicher Arten mit weiter Axialarea. Nova Hedwigia 81: 115–144.

    Article  Google Scholar 

  • Reichardt, E., 2007. Neue und wenig bekannte Gomphonema-Arten (Bacillariophyeae) mit Areolen in Doppelreihen. Nova Hedwigia 35: 103–137.

    Article  Google Scholar 

  • Ribbink, A. J., 1984. Is the species flock concept tenable? In Echelle, A. A. & I. Kornfield (eds), Evolution of Fish Species Flocks. University of Maine at Orono Press, Orono: 21–25.

    Google Scholar 

  • Ripple, H. & J. P. Kociolek, 2013. The diatom (Bacillariophyceae) genus Actinella Lewis from Hawai’i. Pacific Science 67: 609–621.

    Article  Google Scholar 

  • Roberts, R. G., M. Storey & M. Haslam, 2013. Toba supereruption: Age and impact on East African ecosystems. Proceedings of the National Academy of Sciences of the United States of America 110: E3047.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Round, F. E., R. M. Crawford & D. G. Mann, 1990. The Diatoms. Biology and Morphology of the Genera. Cambridge University Press, Cambridge.

    Google Scholar 

  • Roy, D., M. F. Docker, P. E. Hehanussa, D. D. Heath & G. D. Haffner, 2004. Genetic and morphological data supporting the hypothesis of adaptive radiation in the endemic fish of Lake Matano. Journal of Evolutionary Biology 17: 1268–1276.

    Article  CAS  PubMed  Google Scholar 

  • Roy, D., G. Paterson, P. B. Hamilton, D. D. Heath & G. D. Haffner, 2007. Resource-based adaptive divergence in the freshwater fish Telmatherina from Lake Matano, Indonesia. Molecular Ecology 16: 35–48.

    Article  PubMed  Google Scholar 

  • Ruck, E. C. & J. P. Kociolek, 2004. A preliminary phylogeny of the family Surirellaceae. Bibliotheca Diatomologica 50: 1–236.

    Google Scholar 

  • Ruck, E. C. & E. C. Theriot, 2011. Origin and evolution of the canal raphe system in diatoms. Protist 162: 723–737.

    Article  PubMed  Google Scholar 

  • Rushforth, S. R., I. Kaczmarska & J. R. Johansen, 1984. The sub-aerial diatom flora of Thurston Lava Tube, Hawaii. Bacillaria 7: 135–157.

    Google Scholar 

  • Sabbe, K., F. Vanhoutte, R. L. Lowe, E. A. Bergey, B. J. F. Biggs, S. Francoeur, D. Hodgson & W. Vymerman, 2001. Six new Actinella (Bacillariophyta) species from Papua New Guinea, Australia and New Zealand: further evidence for widespread endemism in the Australasian region. European Journal of Phycology 36: 321–340.

    Article  Google Scholar 

  • Salzburger, W. & A. Meyer, 2004. The species flocks of East African cichlid fishes: recent advances in molecular phylogenetics and population genetics. Naturwissenshaften 91: 277–290.

    Article  CAS  Google Scholar 

  • Salzburger, W., A. Meyer, S. Baric, E. Verheyen & C. Sturmbauer, 2002. Phylogeny of the Lake Tanganyika cichlid species flock and its relationship to the Central and East African haplochromine cichlid fish faunas. Systematic Biology 51: 113–135.

    Article  PubMed  Google Scholar 

  • Schelske, C. L., 1999. Diatoms as mediators of biogeochemical silica depletion in the Laurentian Great Lakes. In Stoermer, E. F. & J. P. Smol (eds), The Diatoms: applications for the Environmental and Earth Sciences. Cambridge University Press, Cambridge: 73–84.

    Chapter  Google Scholar 

  • Schluter, D., 1995. Adaptive radiation in sticklebacks: trade-offs in feeding performance and growth. Ecology 76: 82–90.

    Article  Google Scholar 

  • Schluter, D., 1996. Ecological causes of adaptive radiation. American Naturalist 148: s40–s64.

    Article  Google Scholar 

  • Schmidt, A., 1904. Atlas der Diatomaceen-kunde. Leipzig. O.R. Reisland. Series VI (Heft 62–63), plates 245–252. [F. Fricke: pl. 247–248].

  • Schön, I. & K. Martens, 2012. Molecular analyses of ostracod flocks from Lake Baikal and Lake Tanganyika. Hydrobiologia 682: 91–110.

    Article  Google Scholar 

  • Schütt F., 1896. Peridiniales (Peridineae, Dinoflagellata, Cilioflagellata, arthrodele Flagellaten). Bacillariaceae. In Engler A. & K. Prantl (eds) Die natürlichen Pflanzenfamilien nebst ihren Gattungen und wichtigeren Arten, insbesondere den Nutzflanzen, unter Mitwirkung zahlreicher hervorragender Fachgelehrten I. Teil. Abt. 1b. Wilhelm Engelmann, Leipzig: 31–153.

  • Seddon, A. W. R., C. A. Froyd & A. Witkowski, 2011. Diatoms (Bacillariophyta) of isolated islands: new taxa in the genus Navicula sensu stricto from the Galapagos Islands. Journal of Phycology 47: 861–879.

    Article  PubMed  Google Scholar 

  • Skvortzow, B. W., 1937. Bottom diatoms from Olhon Gate of Baikal Lake, Siberia. Philippine Journal of Science 62: 293–377.

    Google Scholar 

  • Sogin, M. & D. J. Patterson, 2005. Stramenopiles. Version 03 June 2005. http://www.tolweb.org/Stramenopiles. In The Tree of Life Project, http://www.tolweb.org.

  • Sorhannus, U., E. J. Fenster, L. H. Burckle & A. Hoffman, 1998. Cladogenetic and anagenetic changes in the morphology of Rhizosolenia praebergonii Mukhina. Historical Biology 13: 185–205.

    Google Scholar 

  • Spaulding, S. A. & J. P. Kociolek, 1998. New Gomphonema (Bacillariophyceae) species from Madagascar. Proceedings of the California Academy of Sciences, 4th Series 50: 361–379.

  • Stauffer, J. R., K. R. Mckaye & A. F. Konings, 2002. Behaviour: an important diagnostic tool for Lake Malawi cichlids. Fish and Fisheries 3: 213–224.

    Article  Google Scholar 

  • Stelbrink, B., I. Stöger, R. K. Hadiaty, U. K. Schliewen & F. Herder, 2014. Ag estimates for an adaptive lake fish radiation, its mitochondrial introgression, and an unexpected sister group: Sailfin silversides of the Malili lakes system in Sulawesi. BMC Evolutionary Biology 14: 94.

    Article  PubMed  PubMed Central  Google Scholar 

  • Stepanek, J. & J. P. Kociolek, 2014. Molecular phylogeny of Amphora sensu stricto (Bacillariophyta): an investigation into the monophyly and classification of the amphoroid diatoms. Protist 165: 177–195.

    Article  PubMed  Google Scholar 

  • Stevenson, R. J., M. L. Bothwell & R. L. Lowe, 1996. Algal ecology. Freshwater Benthic Ecosystem. Academic press, San Diego.

    Google Scholar 

  • Stoermer, E. F., 1964. Notes on Iowa diatoms. VII. Rare and little known diatoms from Iowa. Proceedings ofthe Iowa Academy of Sciences 71: 55–66.

    Google Scholar 

  • Storey, M., R. G. Roberts & M. Saidin, 2012. Astronomically calibrated 40Ar/39Ar for the Toba supreruption and global synchronization of late Quaternary records. Proceedings of the National Academy of Sciences of the United States of America 109: 18684–18688.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Sturmbauer, C., 1998. Explosive speciation in cichlid fishes of the African Great Lakes: a dynamic model of adaptive radiation. Journal of Fish Biology 53: 18–36.

    Article  Google Scholar 

  • Sullivan, J. P., S. Lavoué & C. D. Hopkins, 2002. Discovery and phylogenetic analysis of a riverine species flock of African electric fishes (Mormyridae: Teleostei). Evolution 56: 597–616.

    Article  CAS  PubMed  Google Scholar 

  • Takahashi, T. & S. Koblmüller, 2011. The adaptive radiation of cichlid fish in Lake Tanganyika: a morphological perspective. International Journal of Evolutionary Biology 2011: 620754.

    Article  PubMed  PubMed Central  Google Scholar 

  • Tanaka, H. & T. Nagumo, 2009. Two new Mesodictyopsis species, M. akitaensis sp. nov. and M. miyatanus sp. nov., from a late Miocene to Pliocene freshwater sediment, Japan. Acta Botanica Croatica 68: 221–230.

    Google Scholar 

  • Theriot, E., 1990. New species of Mesodictyon (Bacillariophyta: Thalassiosiraceae) in late Miocenelacustrine deposits of the Snake River Basin Idaho USA. Proceedings of the Academy of Natural Sciences of Philadelphia 142: 1–20.

    Google Scholar 

  • Theriot, E. C., 1992. Clusters, species concepts and morphological evolution of diatoms. Systematic Biology 41: 141–157.

    Article  Google Scholar 

  • Thomas, E., J. Stepanek & J. P. Kociolek, 2016. Historical and Current Perspectives on the Systematics of the ‘Enigmatic’ Diatom Genus Rhoicosphenia (Bacillariophyta), with Single and Multi-Molecular Marker and Morphological Analyses and Discussion on the Monophyly of ‘Monoraphid’ Diatoms. PLoS ONE 11: e0152797.

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Usoltseva, M., J. P. Kociolek & G. Khursevich, 2013. Three new species of Alveolophora (Aulacoseiraceae, Bacillariophyceae) from Miocene deposits in western North America. Phycologia 52: 109–117.

    Article  Google Scholar 

  • Vaillant, J. J., G. D. Haffner & M. E. Cristescu, 2011. The ancient lakes of Indonesia: towards integrated research on speciation. Integrative and Comparative Biology 51: 634–643.

    Article  PubMed  Google Scholar 

  • Van Bemmelen, R. W., 1970. The geology of Indonesia. Martinus Nijhoff, The Hague.

    Google Scholar 

  • Van Damme, D. & A. Gautier, 2013. Lacustrine mollusk radiations in the Lake Malawi Basin: experiments in a natural laboratory for evolution. Biogeosciences 10: 5767–5778.

    Article  Google Scholar 

  • Vanelslander, B., V. Créach, P. Vanormelingen, A. Ernst, V. A. Chepurnov, E. Sahan, G. Muyzer, L. J. Stal, W. Vyverman & K. Sabbe, 2009. Ecological differentiation between sympatric pseudocryptic species in the estuarine benthic diatom Navicula phyllepta (Bacillariophyceae). Journal of Phycology 45: 1278–1289.

    Article  CAS  PubMed  Google Scholar 

  • Van de Vijver, B., R. Zidarova, M. Sterken, E. Verleyen, M. de Haan, W. Vyverman, F. Hinz & K. Sabbe, 2011. Revision of the genus Navicula s.s. (Bacillariophyceae) in inland waters of the Sub-Antarctic and Antarctic with the description of five new species. Phycologia 50: 281–297.

    Article  Google Scholar 

  • Van de Vijver, B., R. Zidarova & K. Kopalova, 2014. New species in the genus Muelleria (Bacillariophyta) from the Maritime Antarctic region. Fottea 14: 77–90.

    Article  Google Scholar 

  • VanLandingham, S.L., 1978. Catalogue of the Fossil and Recent Genera and Species of Diatoms and Their Synonyms, Part VII Rhoicosphenia Through Zygoceros. Vol 1. J. Cramer, Lehre & Vaduz: 3606–4241.

  • Vanormelingen, P., K. M. Evans, V. A. Chepurnov, W. Vyverman & D. G. Mann, 2013. Molecular species discovery in the diatom Sellaphora and its congruence with mating trials. Fottea 13: 133–148.

    Article  Google Scholar 

  • Veselá, J., P. Urbanková, K. Cerná & J. Neustupa, 2012. Ecological variation within traditional diatom morphospecies: diversity of Frustulia rhomboides sensu lato (Bacillariophyceae) in European freshwater habitats. Phycologia 51: 552–561.

    Article  Google Scholar 

  • Vishnyakov, V. S., M. S. Kulikovskiy, N. I. Dorofeyuk & S. I. Genkal, 2015. Morphology, taxonomy and geographical distribution of species of the Neidium kozlowii complex (Bacillariophyceae). Botanical Journal 100: 787–798.

    Google Scholar 

  • von Rintelen, T., A. B. Wilson, A. Meyer & M. Glaubrecht, 2004. Escalation and trophic specialization drive adaptive radiation of freshwater gastropods in ancient lakes on Sulawesi, Indonesia. Proceedings of the Royal Society of London B: Biological Sciences 271: 2541–2549.

    Article  Google Scholar 

  • von Rintelen, T., K. von Rintelen, & M. Glaubrecht, 2010. The species flocks of the viiparous fresh watergastropod Tylomelania (Mollusca: Cerithioidea: Pachychilidae) in the ancient lakes of Sulawesi, Indonesia: the role of geography, trophic morphology and color as driving forces in adpative radiation. In: M. Glaubrecht (ed.), Evolution in Action, Springer, Berlin: 485.

  • von Rintelen, T., K. von Rintelen, M. Glaubrecht, C. D. Schubart & F. Herder, 2012. Aquatic biodiversity hotspots in Wallacea: the species flock in the ancient lakes of Sulawesi, Indonesia. In Gower, J. et al. (eds), Biotic Evolution and Environmental Change in Southeast Asia. Systematics Association, Cambridge University Press, Cambridge: 290–315.

  • Vongsombath, C., A. D. Pham, T. M. L. Nguyen, T. Kunpradid, S. P. Davison, Y. Peerapornpisal & M. Meng, 2009. Report on the 2006 biomonitoring survey of the lower Mekong River and selected tributaries. MRC Technical Paper 22: 1–124.

    Google Scholar 

  • Vyverman, W., 1991. Diatoms from Papua New Guinea. Bibliotheca Diatomologica 22: 1–224.

    Google Scholar 

  • Wagner, B. & T. Wilke, 2011. Evolutionary and geological history of the Balkan lakes Ohrid and Prespa. Biogeosciences 8: 995–998.

    Article  Google Scholar 

  • Wallace, A. R., 1860. On the zoological geography of the Malay Archipelago. Journal of the Proceedings of the Linnean Society of London Zoology 4: 172–184.

    Article  Google Scholar 

  • Watanabe, T., T. Ohtsuka, A. Tuji & A. Houki, 2005. Picture book and ecology of the freshwater diatoms. Uchida Rokakuho Publishing, Tokyo.

    Google Scholar 

  • Wetzel, C., H. Lange-Bertalot, E. A. Morales, D. C. Bicudo, L. Hoffmann & L. Ector, 2012. Bicudoa amazonica gen. nov. et sp. nov. (Bacillariophyta)- a new freshwater diatom from the Amazong basin with a complete raphe loss in the eunotioid lineage. Phytotaxa 75: 1–18.

    Article  Google Scholar 

  • Wilke, T., R. Väinölä & F. Riedel, 2008. Patterns and Processes of Speciation in Ancient Lakes. Springer, Berlin.

    Google Scholar 

  • Wilson, N. G., J. A. Maschek & B. J. Baker, 2013. A species flock driven by predation? Secondary metabolites support diversification of slugs in Antarctica. PLoS ONE 8(11): e80277.

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Wolf, A. P. & P. A. Siver, 2009. Three extant genera of freshwater thalassiosiroid diatoms from Middle Eocene sediments in northern Canada. American Journal of Botany 96: 487–497.

    Article  Google Scholar 

  • Yool, A. & T. Tyrrell, 2003. Role of diatoms in regulating the ocean’s silicon cycle. Global Biogeochemical Cycles. doi:10.1029/2002GB002018.

    Google Scholar 

  • Zhang, W., Y. L. Li, J. P. Kociolek, R. L. Zhang & L. Q. Wang, 2015. Oricymba tianmuensis sp. nov., a new cymbelloid species (Bacillariophyceae) from Tianmu Mountain in Zhejiang Province, China. Phytotaxa 236: 257–265.

    Article  Google Scholar 

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Acknowledgements

JPK was supported in part for this work by a Fulbright Scholarship. Partial support for this work came from National Science Foundation grant DEB-0841774 to JPK. Support for MK came from by Russian Science Foundation (14-14-00555). The helpful reviews and comment of three anonymous reviewers is greatly appreciated.

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Kociolek, J.P., Hamsher, S.E., Kulikovskiy, M. et al. Are there species flocks in freshwater diatoms? A review of past reports and a look to the future. Hydrobiologia 792, 17–35 (2017). https://doi.org/10.1007/s10750-016-3075-1

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