In order to gather a good representation of the plausible genetic variability present in the saffron crop, the collecting places were subdivided in (a) zones of commercial cultivation of saffron (EU countries and outside EU) including Protected Denomination of Origin (DOP) and (b) worldwide zones of remaining yields of saffron spice including several abandoned fields. To collect samples of saffron allies (Crocus spp.) four sources of germplasm were exploited: (a) from the wild (natural populations), (b) from botanical gardens, (c) from commercial nurseries and (d) from BGV-CU collection management (seeds).
The collection is housed at the Bank of Plant Germplasm of Cuenca (BGV-CU, Spain). The experimental farm is located in the latitude and longitude 40°04′08.17″ N and 2°11′57.07″W, respectively, with altitude between 950 and 1,000 m, average annual temperature of 11.5°C, and precipitation ranging from 550 to 600 mm mainly concentrated in spring and autumn. The edaphic characteristics in the plot are typical of the area with sandy loams, alkaline pH (7.6–8.4), normal electric conductivity (<400 nmhos/cm) and low content in organic matter (1–2.5%).
Ex situ conservation and multiplication
Genetic materials are preserved in the form of corms (saffron and wild relatives) and seeds (only wild species). General conservation and multiplication strategies for the collections are the standards for international genebanks outlined by Engels and Visser (2003). In addition, specific strategies and bank design for the ex situ conservation were established mainly based on information regarding the source of the species, reproductive biology, mode of multiplication, sample type and objectives of the collection. The design comprises three main collections:
Reserve Vegetative Collection (saffron and allies): 10 corms of each accession were sown in special flower-pots with substrate of the collecting zone and/or specific mixture (soil enriched with organic matter mixed with sand) and placed in a greenhouse with semi-controlled conditions. Irrigation and weeding were done by hand when necessary.
Exchange vegetative Collection (saffron and allies): The accessions (40 corms each) were sown in the experimental farm (field conditions) in a 10–15 cm furrow, with 15 cm among plants and 50 cm among furrows. Conventional labouring was used to prepare soil for seeding and previous fertilization applying N (80 UF), P (100 UF) and K (100 UF) was carried out. Irrigation schedule was applied depending on the climatic conditions.
Seed collection (wild Crocus): The acquired seeds both from the wild and from seed harvesting in BGV-CU were placed in hermetic jars including silica gel inside and stored in a refrigerated chamber at 4°C and 30% relative humidity.
In order to facilitate retrieval and updating of information, descriptors were grouped attending to the categories proposed by Bioversity (Bioversity International 2007): passport (accession, collecting, ethnobotanical data), management, site and environment and characterisation. Passport, site and environment descriptors were adapted from the multicrop passport descriptors (MCPD) proposed by Bioversity with the inclusion of three specific descriptors: registry of income (hyperlink field), intermediary (in the acquisitions process) and photo (Ole object). Two groups of descriptors for management, seed management descriptors and vegetative management descriptors, were adapted and/or newly defined. In both cases (saffron and its wild relatives), passport information was gathered through formal Collecting Form Sheet accompanying each accession during the acquisitions process (collecting, donations, etc.) and available for download from http://www.crocusbank.org.
Central information system for Crocus germplasm
Documentation and management of the collection have been running through the Central Information System (CIS), a comprehensive electronic platform that provides an interactive documentation system including relational database and a web interface. The CIS has been developed using html and asp pages (Macromedia Dreamweaver© CS4) as a front-end application and MS-Access© 2007 as a back-end application.
Characterisation and evaluation
First, we defined a list of descriptors valid for the genus Crocus, based on the revision of taxonomic criteria for the genus (Mathew 1977, 1982), as well as our experience of research team involved and the preliminary characterisation assays carried out (De-Los-Mozos-Pascual et al. 2010c). We also took into account the categories present in other Bioversity lists of descriptors (http://www.bioversityinternational.org).
Regarding to characterisation, we have currently evaluated 100 accessions, including 66 saffron accessions from different origins (Azerbaijan, France, India, Iran, Italy, Morocco, New Zealand, Spain and Turkey) and 34 other Crocus accessions from 21 different species. For these purposes, a randomized block design, with three blocks and ten corms per accession and block has been followed in the facilities of BGV-CU.
Present germplasm activities and procedures
In agreement with Khoury et al. (2010), among the most important current issues regarding the conservation and use of plant genetic resources in the BGV-CU are: acquisition of germplasm (collecting), multiplication and conservation, documentation (information systems), definition of crop descriptors, characterisation and user priorities (supplying). A view of the main activities carried out in the BGV-CU is shown in Fig. 1.
The development of efficient collecting strategies depends on the extent of the information of the type of genetic variation in target populations of taxa and their distribution in the target geographical region (Upadhyaya et al. 2006, 2008). Therefore, the genetic diversity of the saffron crop in the farmer field, relict zones or abandoned fields has been complemented with the diversity present in the relatives of the crop (Crocus spp., see Fig. 2).
Since 2006, eighty-one (81) acquisition trips have been made to collect saffron accessions (Table 1). The results of exploration and collection have yielded saffron germplasm from commercial areas in EU countries (5 countries, 169 accessions), from commercial areas in other non-EU countries (7 countries, 18 accessions) and from zones of remaining minimal or relict productions (5 countries, 26 accessions). The acquired materials cover a wide range of the genetic variability of the crop. The maintenance of accessions from relict areas is an effort to rescue the germplasm that has been lost due to the reduction of land surface dedicated to the saffron crop in the last decades.
In addition, as a result of a large-scale international collecting effort, during the period 2006–2009, one hundred and one (101) expeditions, lasting from 1 to 4 days each, were carried out covering phytogeographical regions of 10 countries where wild Crocus taxa have been documented (Table 2). Two hundred and forty six (246) accessions, belonging to thirty-one (31) different Crocus taxa (only species) were acquired as the result of the mentioned effort. At this stage, it is reasonable to indicate that germplasm collection has a good representation of the wild Crocus germplasm of plausible utility in saffron breeding. However, wild relatives are increasingly valued and the consciousness of the need for more extensive collecting must be a permanent goal (Khoury et al. 2010).
Twenty-four (24) accessions corresponding to 13 Crocus species (subspecific taxonomic categories and commercial cultivars are not included in the statistics) have been acquired through donations from cultivated samples in botanical gardens. Three target Crocus taxa missed in collecting expeditions (C. kotschyanus, C. ochroleucus and C. cancellatus) were recently included in the collection through donations from botanic gardens (Table 3). Additional efforts such as contacting with private companies, traditional cultivators and producers, rendered donations of another 11 saffron accessions (Table 4).
Acquisition from nurseries
A total of ninety-one (91) accessions from the most reputed nurseries worldwide have been acquired. As a result of these efforts, nineteen (19) new species (subspecific taxonomic categories and commercial cultivars are not included in the statistics), that failed to be acquired through collecting expeditions and donations, were included in the collection (Table 5). Taking into account the importance of the genus as a source of ornamental plants we included some of the most priced cultivars grown as garden plants.
Germplasm ex situ conservation concerns and strategies
At present, the collection contains 572 accessions representing 47 Crocus species (subspecific taxonomic categories and commercial cultivars are not included in the statistics) from 18 countries. In this connection, the BGV-CU has two main objectives: the first involves material conserved for the medium and long term, with the aim of preserving the genetic information in the accession, and the second concern material currently in use or about to be used. The current status of the collection is summarized in Table 6.
For many crops, but particularly the vegetatively propagated species, the development of new strategies, or extension of strategies to more genotypes (e.g. wild accessions) is needed for better conservation systems (Khoury et al. 2010). The experience gained during 3 years of conservation has guaranteed the representativeness of accessions through the different collections in the bank design as a good strategy for further exploitation of the collection (Table 7).
Reserve vegetative collection
This collection has been created for the long-term storage and preservation, the recovery of missing accessions during the multiplication process and the preservation of the germplasm at BGV-CU. No distribution or exchange of material is achieved from this collection. At present, all the collection in vegetative form (corms) is represented in the RSVC (see Table 7) including saffron (220 accessions) and other Crocus (251 accessions).
Exchange vegetative collection
It refers to the collection kept for medium-term preservation and it is responsible for implementing distribution and utilisation (characterisation and evaluation). Ideally, the collection must be maintained in sufficient quantities to be available to the users. Currently around 100% of saffron accessions and 77% of other Crocus accessions are represented in EXVC (Table 7).
Due to the biological characteristics of Crocus species, the collection is maintained and reproduced basically in a vegetative way. However, we have preserved seeds of 101 accessions from 20 different Crocus taxa (Table 7).
Documentation of information on Plant Genetic Resources (PGR) is imperative for planning and implementing activities related to their conservation, sustainable utilisation and sharing of benefits accrued from their use (Agrawal et al. 2007). The need of maintaining and exchanging such information is specifically recognized in Articles 7d and 17 of the Convention of Biological Diversity (CBD 1993). The design of global information database, are of extreme importance to the conservation and use of collections (Wallace et al. 2008; Pandey et al. 2008; Ravisankar et al. 2008; Upadhyaya et al. 2008; Khoury et al. 2010). The conversion of off-line database to a searchable on-line database is a high priority on acting to build better information systems (Khoury et al. 2010).
Database implementation and descriptions (back-end application)
A specific relational database with 28 related tables, 20 data entry forms, 2 reports, and 60 queries based on the passport and management descriptors mentioned above has been prepared. A control panel (main menu) with a series of user-friendly menus was designed in order to facilitate the accurate updating of database and to provide easy access to stored information. A link to photographic documentation and phenology behaviour of each accession has been included.
The database comprises the following categories:
a) Accession passport descriptors: 25 descriptors including identification data related to the registration of the sample at the germplasm bank.
b) Collecting passport descriptors: 26 descriptors providing detailed information regarding the conditions prevailing at the species-specific habitat in the natural environment.
c) Management: 20 descriptors are being recorded providing detailed information regarding the current status of conservation and multiplication of each accession through the different collections.
d) Characterisation/Evaluation: A database structure with specific fields is being prepared to include characterisation data after publication.
Web interface (front-end application)
Documentation systems through internet enable rapid dissemination of the database information to users. In this connection, we developed and currently manage the CIS (Santana et al. 2010). The web interface (http://www.crocusbank.org/Information%20System.html) comprises all the BGV-CU services subdivided in two main subsections:
a) Connections to a database in order to provide:
Information related to the passport descriptors executing queries through direct links and/or searching in the database (http://www.crocusbank.org/Database/ buscador.asp),
Information about the management of descriptors as the basis for further queries in order to inform on the availability of preserved materials and future request of accessions (http://www.crocusbank.org/Database/ConsultBulbsAvailability.asp),
A summary of the characterisation descriptors recorded in the collection (will be available on Internet after publication).
b) Other BGV-CU services to the final users, including methodologies and protocols, interactive maps of current saffron producing areas and distribution of taxa in the genus Crocus (http://www.crocusbank.org/ammap_2.1.0/examples/drill_down/SaffronAreasMapNew.html), a review of the literature about saffron and other Crocus (http://www.crocusbank.org/Login.asp), documents related to the management of genetic resources and a photographic documentation of activities and actions made so far (http://www.crocusbank.org/GGallery.html).
Database on-line searches
Through the path: http://www.crocusbank.org/Databse/buscador.asp, users can search all the information available from the CIS by identifying one or more of about 26 passport data of the accessions preserved. The text input files are set by default for an exact match (without accents, swung dash or other special characters). These searches can be modified to find records containing any part of the text the user needs to find. Complex queries can be executed integrating data from multiple passport data (Santana et al. 2010).
A basic criterion for supplying plant materials including dates of request and sending has been established based on phenology of the materials and facilities at the BGV-CU. At the short time the provision of genetic materials (corms, leaves, styles, anthers and seeds) is addressed to carry out the complete characterisation/evaluation of the collection. From the next 2 years users can consult the availability of materials (through the CIS or by contacting the curator) in order to request accessions. Before the user receives the materials a Material Transfer Agreement between donor and recipient must be signed.
A descriptor list for whole characterisation and evaluation of the genus has been defined and improved during the last 3 years (unpublished data). It includes characterization descriptors (95 traits), evaluation descriptors (47 traits) and descriptors based on genetic markers technologies and cytological characters (14 traits), and embraces a diverse set of data (morphological, phenological, agronomical, phytochemical, molecular, etc.), with the aim of being a useful tool for the description of the genetic variation in the genus Crocus.
Germplasm characterisation is an important operation for a genebank since the value of the germplasm collection depends on the availability and quality of the information relative to the preserved accessions. Therefore, one of the main goals of CROCUSBANK action is to strategically characterize and evaluate germplasm of saffron and allies at different levels. A partial characterisation/evaluation of the collection have been developed during last years taking into account morphological, phenological, agronomical, resistance to salt stress, phytochemical, and molecular characters.
Sixty-six (66) saffron accessions have been characterised/evaluated for morphological, phenological and agronomical traits, and the existence of variability has been observed, suggesting the existence of genetic differences among the accessions related to the geographic origin of the materials (unpublished data). These preliminary results are being confirmed by the data obtained in other approaches. A different sensitiveness to saline stress has been recorded among some of the above mentioned saffron accessions in relation to genotypes origin (unpublished data). The phytochemical analysis using gas chromatography (GC-MS) and/or spectroscopic methods (FT-IR, Raman) also indicates that potential variability occurs among saffron accessions (unpublished data). In the same way genomic AFLP and SNPs markers have been identified in a subset of accessions, showing clearly the existence of genetic variation in saffron crop (unpublished data). In addition, these genetic markers provide a specific genetic fingerprint that could be very useful for the rationalisation of the bank.
The significant genetic variability found in saffron, evidenced with the on-going characterisation/evaluation studies, opens the door to unravel the peculiarities of “land varieties” of this minor but highly appreciated Mediterranean crop. Accordingly, these results scientifically support the importance of conserving the local and precious cultivated germplasm worldwide.
Similar studies have been programmed or are being developed indeed for other Crocus species integrated in the WSCC, however, the shortage of materials in most accessions is by the moment a limiting factor to develop more extensive studies. Anyway, preliminary trials considering different kind of traits (mainly morphological, phenological and molecular, but also salt stress resistance, and phytochemical in a lesser extent), have revealed both, interspecific and intraspecific variability, in 34 accessions belonging to 21 species (unpublished data). That information may be of interest for different purposes (commercial gardening, bank rationalisation, taxonomic or evolution studies, etc.), although much work remains to be done in the future with these materials.
Future actions and prospects on the WSCC
The WSCC has already a wide representation of the Crocus germplasm of plausible utility in saffron breeding which has never been achieved before. Additionally, for the first time worldwide it has been created a unique collection which contains a large part of the variability of the saffron crop and wild relatives at global scale for common use. Therefore, priority actions to make useful the genetic resources to potential users are needed as outlined in Table 8.