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Development and application of a SRAP marker for the identification of sex in Buchloe dactyloides

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Abstract

Buffalograss, Buchloe dactyloides (Nutt.) Engelm, is a dioecious turfgrass native to the Great Plains of North America. Since its naturalization, it has become the most wildly cultivated warm-season turfgrass in northern China. While dioecious plants represent only a small proportion of all plant species, they are important models in the study of plant sex determination and evolution. The identification of the sexes is important in the theory and practice of breeding programs. At present, there is no effective method to determine the sex of early stage buffalograss. The objective of this study was to use sequence-related amplified polymorphism (SRAP) and integrated bulked segregant analysis (BSA) technology to find sex linked markers in B. dactyloides. A total of 228 primer combinations were screened and 2,690 SRAP bands examined. Only ME9/EM2 could generate a specific fragment (~240 bp) in all the female plants, which was absent in male plants. The methods described here provide a simple and reproducible means of early sex identification in B. dactyloides.

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References

  • Alstrom-Rapaport C, Lascoux M, Wang YC et al (1998) Identification of a RAPD marker linked to sex determination in the basket willow (Salix viminalis L.). J Hered 89(1):44–48

    Article  CAS  Google Scholar 

  • Beard JB (1973) Turfgrass: science and culture. Prentice-Hall, Englewood Cliffs

    Google Scholar 

  • Beetle AA (1950) Buffalograss-native of the shortgrass plains. Univ Wyoming Agric Exp Stn Bull 293:1–31

    Google Scholar 

  • Budak H, Shearman RC, Parmaksiz I et al (2004a) Molecular characterization of buffalo grass germplasm using sequence-related amplified polymorphism markers. Theor Appl Genet 108(2):328–334

    Article  PubMed  CAS  Google Scholar 

  • Budak H, Shearman RC, Gaussoin RE et al (2004b) Application of sequence-related amplified polymorphism markers for characterization of turfgrass species. Hortscience 39(5):955–958

    CAS  Google Scholar 

  • Budak H, Shearman RC, Parmaksiz I et al (2004c) Comparative analysis of seeded and vegetative buffalograsses based on pylogenetic relationship using ISSR, SSR, RAPD and SRAP. Theor Appl Genet 109:280–288

    Article  PubMed  CAS  Google Scholar 

  • Budak H, Shearman RC, Gulsen O et al (2005) Understanding ploidy complex and geographic origin of the Buhcloe dactyloides genome using cytoplasmic and nuclear marker system. Theor Appl Genet 111:1545–1552

    Article  PubMed  CAS  Google Scholar 

  • Chaves-Bedoya G, Nunez V (2007) A SCAR marker for the sex types determination in Colombian genotypes of Carica papaya. Euphytica 153(1/2):215–220

    CAS  Google Scholar 

  • Cheplick GP (1998) Population biology of grasses. Cambridge University Press, Cambridge, pp 136–138

    Book  Google Scholar 

  • Cristiana Moliterni VM et al (2004) The sexual differentiation of Cannabis sativa L.: a morphological and molecular study. Euphytica 140:95–106

    Article  Google Scholar 

  • Deputy JC, Ming R, Ma H et al (2003) Molecular markers for sex determination in papaya (Carica papaya L.). Theor Appl Genet 106(1):107–111

    Google Scholar 

  • Ferriol M, Pico B, Nuez F (2003) Genetic diversity of a germplasm collection of Cucurbita pepo using SRAP and AFLP markers. Theor Appl Genet 107:271–282

    Article  PubMed  CAS  Google Scholar 

  • Gao WJ, Li R, Li L et al (2007) Identification of two markers linked to the sex locus in dioecious Asparagus officinalis plants. Russ J Plant Physiol 54(6):816–821

    Article  CAS  Google Scholar 

  • Gill GP, Harvey CF, Gardner RC et al (1998) Development of sex-linked PCR markers for gender identification in Actinidia. Theor Appl Genet 97(3):439–445

    Article  CAS  Google Scholar 

  • Gunter LE, Roberts GT, Lee K et al (2003) The development of two flanking SCAR markers linked to a sex determination locus in Salix viminalis L. J Hered 94(2):185–189

    Article  PubMed  CAS  Google Scholar 

  • Hitchcock AS (1951) Manual of the grasses of the United States, 2nd edn. US Department of Agriculture, Misc Publication 200, Washington

  • Hormaza JI, Dollo L, Polito VS (1994) Identification of a RAPD marker linked to sex determination in Pistacia vera using bulked segregant analysis. Theor Appl Genet 89(1):9–13

    Article  CAS  Google Scholar 

  • Huff DR, Wu L (1987) Sex expression in buffalograss under different environments. J Crop Sci 27:623–626

    Article  Google Scholar 

  • Huff DR, Wu L (1992) Distribution and inheritance of inconstant sex forms in natural populations of dioecious buffalograss (Buchloe dactyloides). Am J Bot 79:207–215

    Article  Google Scholar 

  • Jiang C, Sink KC (1997) RAPD and SCAR markers linked to the sex expression locus M in asparagus. Euphytica 94:329–333

    Article  CAS  Google Scholar 

  • Khadka DK, Nejidat A, Tai M et al (2002) DNA markers for sex: molecular evidence for gender dimorphism in dioecious Mercurialis annua L. Mol Breed 9:251–257

    Article  CAS  Google Scholar 

  • Korpelainen H (2002) A genetic method to resolve gender complements investigations on sex ratios in Rumex acetosa. Mol Ecol 11(10):2151–2156

    Article  PubMed  CAS  Google Scholar 

  • Lemos EGM, Silva CLSP, Zaidan HA (2002) Identification of sex in Carica papaya L. using RAPD markers. Euphytica 127(2):179–184

    Article  CAS  Google Scholar 

  • Li G, Quiros CF (2001) Sequence-related amplified polymorphism (SRAP), a new marker system based on a simple PCR reaction: its application to mapping and gene tagging in Brassica. Theor Appl Genet 103:455–461

    Article  CAS  Google Scholar 

  • Li G, Gao M, Yang B, Quiros CF (2003) Gene for gene alignment between the Brassica and Arabidopsis genomes by direct transcriptome mapping. Theor Appl Genet 107:168–180

    Article  PubMed  CAS  Google Scholar 

  • Liang CAI, Xiaocheng TIAN, Ming LI et al (2002) Application of RAPD in discrimination of Podocarpus macrophyllus’s sex. J Fudan Univ 41(6):635–640

    Google Scholar 

  • Liao L, Liu J, Dai Y et al (2009) Development and application of SCAR markers for sex identification in the dioecious species Ginkgo biloba L. Euphytica 169:49–55

    Article  CAS  Google Scholar 

  • Lin Z, Zhang X, Nie Y et al (2003) Construction of a genetic linkage map for cotton based on SRAP. Chin Sci Bull 48(19):2063–2067

    Article  CAS  Google Scholar 

  • Mandolino G, Carboni A, Forapani S et al (1998) Identification of DNA markers linked to the male sex in dioecious hemp (Cannabis sativa L.). Theor Appl Genet 98(1):86–92

    Article  Google Scholar 

  • Masayuki M (2009) Development of SCAR markers for sex determination in the dioecious shrub Aucuba japonica (Cornaceae). Genome 52:231–237

    Article  Google Scholar 

  • Ming R, Moore PH (2007) Genomics of sex chromosomes. Curr Opin Plant Biol 10:123–130

    Article  PubMed  CAS  Google Scholar 

  • Mulcahy DL, Weeden NF, Kesseli et al (1992) DNA probes for the Y-chromosome of Silene latifolia, a dioecious angiosperm. Sex Plant Reprod 5(1):86–88

    Article  Google Scholar 

  • Niu JZ (2006) Study on the selection of cultivar, clonal growth and mechanism of resource translocating between Clonal Ramets of Buffalograss (Buchloe dactyloides). Dissertation for Master’s Degree, China Agricultural University

  • Paran I, Michelmore RW (1993) Development of reliable PCR-based marker linked to Downey mildew resistant genes in lettuce. Theor Appl Genet 85:985–993

    Article  CAS  Google Scholar 

  • Parasnis AS, Ramakrishna W, Chowdari KV (1999) Mierosatellite (GATA) n reveals sex-specific differences in PaPaya. Theor Appl Genet 99(6):1047–1052

    Article  CAS  Google Scholar 

  • Parasnis AS, Gupta VS, Tamhankar SA et al (2000) A highly reliable sex diagnostic PCR assay for mass screening of papaya seedlings. Mol Breed 6(3):337–344

    Article  CAS  Google Scholar 

  • Parker JS (1990) Sex chromosomes and sexual differentiation in flowering plants. Chromosom Today 10:187–198

    CAS  Google Scholar 

  • Parrish TL, Koelewijn HP, van Dijk PJ (2004) Identification of a male-specific AFLP marker in a functionally dioecious Ficus fulva. Sex Plant Reprod 17:17–22

    Article  CAS  Google Scholar 

  • Prakash S, Staden JV (2006) Sex identification in Encephalartos natalensis (Dyer and Verdoorn) using RAPD markers. Euphytica 152:197–200

    Article  CAS  Google Scholar 

  • Reamon-Buttner SM, Jung C (2000) AFLP-derived STS markers for the identification of sex in Asparagus officinalis L. Theor Appl Genet 100:432–438

    Article  CAS  Google Scholar 

  • Reeder JR (1971) Notes on Mexican grasses. IX. Miscellaneous chromosome numbers. Brittonia 23:105–117

    Article  Google Scholar 

  • Ren C-X, Huang J, Chang XY et al (2007) RAPD and SCAR molecular markers for male trait in Carica papaya. J Fruit Sci 24(1):72–75

    CAS  Google Scholar 

  • Roodt R, Spies JJ, Burger TH (2002) Preliminary DNA finger-printing of the turfgrass Cynodon dactylon (Poaceae: Cloridoideae). Bothalia 32:117–122

    Google Scholar 

  • Ruas CF, Fairbanks DJ, Evans RP et al (1998) Male-specific DNA in the dioecious species Atriplex garrettii (Chenopodiaceae). Am J Bot 85(2):162–197

    Article  PubMed  CAS  Google Scholar 

  • Saghai-Maroof MA, Soliman KM, Jorgensen RA et al (1984) Ribosomal DNA spacer-length polymorphisms in barely: ribosomal inheritance, chromosomal location, and population dynamics. Proc Natl Acad Sci USA 81(24):8014–8018

    Article  PubMed  CAS  Google Scholar 

  • Shao MJ (1998) Breeding of new variety of buffalograss. The Temple of Heaven. Beijing (unpublished data)

  • Stilio VS, di Kesseli RV, Mulcahy DL (1998) A pseudo autosomal random amplified polymorphic DNA marker for the sex chromosomes of Silene dioica. Genetics 149(4):2057–2062

    PubMed  Google Scholar 

  • Tang DM, Luo SP, Li J et al (2003) Sex identification of pistachio by using RAPD analysis. J Fruit Sci 20(2):124–126

    Google Scholar 

  • Torjek O, Bucherna N, Kiss E et al (2002) Novel male-specific molecular markers (MADC5, MADC6) in hemp. Euphytica 127(2):209–218

    Article  Google Scholar 

  • Urasaki N, Tokumoto M, Tarora K et al (2002) A male and hermaphrodite specific RAPD marker for papaya (Carica papaya L.). Theor Appl Genet 104:281–285

    Article  PubMed  CAS  Google Scholar 

  • Vyskot B, Hobza R (2004) Gender in plants: sex chromosomes are emerging from the fog. Trends Genet 20:432–438

    Article  PubMed  CAS  Google Scholar 

  • Xu WJ, Wang BW, Cui KM (2004) RAPD and SCAR markers linked to sex determination in Eucommia ulmoides Oliv. Euphytica 136:233–238

    Article  CAS  Google Scholar 

  • Yakubov B, Barazani O, Golan-Goldhirsh A (2005) Combination of SCAR primers and touch-down PCR for sex identification in Pistacia vera L. Sci Hortic 103(4):473–478

    Article  CAS  Google Scholar 

  • Yampolsky C, Yampolsky H (1922) Distribution of sex forms in the phanerogamic flora. Bibl Genet 3:1–62

    Google Scholar 

  • Yanan H, Fenglan L, Shumin G (2004) Sex determination and sexual organ differentiation in flowering plants. For Stud China 4(6):51–57

    Google Scholar 

  • Yao CC, Wang YJ, Liu XF et al (2005) Obtainment and application of RAPD marker S1032–850 linked to male gene in Actinidia. J Agric Biotechnol 13(5):557–561

    CAS  Google Scholar 

  • Zeng B, Zhang XQ, Lan Y et al (2008) Evaluation of genetic diversity and relationships in orchardgrass (Dactylis glomerata L.) germplasm based on SRAP markers. Can J Plant Sci 88(1):53–60

    Article  CAS  Google Scholar 

  • Zheng L, Junsong P, Yuan G et al (2008) Development and fine mapping of three codominant SCAR markers linked to the M/m gene in the cucumber plant (Cucumis sativus L.). Theor Appl Genet 117:1253–1260

    Article  Google Scholar 

  • Zheng C, Zhu X, Fang L et al (2009) Analysis of sex and strains of Ficus awkeotsang Makino by SRAP. Chin J Trop Crops 12(30):1740–1745

    Google Scholar 

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Acknowledgments

This study was supported by National Natural Science Foundation of China (30800799).

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Correspondence to Xian-guo Wang.

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Zhou, Yj., Wang, Xg. & Zhang, Xq. Development and application of a SRAP marker for the identification of sex in Buchloe dactyloides . Euphytica 181, 261–266 (2011). https://doi.org/10.1007/s10681-011-0419-9

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  • DOI: https://doi.org/10.1007/s10681-011-0419-9

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