Skip to main content
Log in

Genetic Diversity of Winter Wheat (Triticum aestivum L.) Revealed by SSR Markers

  • Note
  • Published:
Biochemical Genetics Aims and scope Submit manuscript

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1

References

  • Ahmad M (2002) Assessment of genomic diversity among wheat genotypes as determined by simple sequence repeats. Genome 45:646–651

    Article  PubMed  CAS  Google Scholar 

  • Akfirat FS, Aydin Y, Ertugrul F, Hasancebi S, Kazan K, Budak H, Akan K, Mert Z, Bolat N, Yorgancılar O, Uncuoglu AA (2010) A microsatelite marker for yellow rust resistance in wheat. Cereal Res Commun 38:203–210

    Article  CAS  Google Scholar 

  • Almanza-Pinzon MI, Khairallah M, Fox PN, Warburton ML (2003) Comparison of molecular markers and coefficients of parentage for the analysis of genetic diversity among spring bread wheat accessions. Euphytica 130:77–86

    Article  CAS  Google Scholar 

  • Bohn M, Utz HF, Melchinger AE (1999) Genetic similarities among winter wheat cultivars determined on the basis of RFLPs, AFLPs and SSRs and their use for predicting progeny variance. Crop Sci 39:228–237

    Article  CAS  Google Scholar 

  • Börner A, Chebotar S, Korzun V (2000) Molecular characterization of the genetic integrity of wheat (Triticum aestivum L.) germplasm after long-term maintenance. Theor Appl Genet 100:494–497

    Article  Google Scholar 

  • Botstein D, White RL, Skolnick M, Davis RW (1980) Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32:314–331

    PubMed  CAS  Google Scholar 

  • Dreisigacker S, Zhang P, Warburton ML, Skovmand B, Hoisington D, Melchinger AE (2005) Genetic diversity among and within CIMMYT wheat landrace accessions investigated with SSRs and implications for plant genetic resources management. Crop Sci 45:653–661

    Article  CAS  Google Scholar 

  • Ercan S, Ertugrul F, Aydın Y, Senturk-Akfırat F, Hasancebi S, Cetin L, Akan K, Mert Z, Bolat N, Cakmak M, Altınkut-Uncuoglu A (2010) An EST-SSR marker linked with yellow rust resistance in wheat (Triticum aestivum L.). Biol Plantarum 54:691–696

    Article  CAS  Google Scholar 

  • Fufa H, Baenziger PS, Beecher BS, Dweikat I, Graybosch RA, Eskridge KM (2005) Comparison of phenotypic and molecular marker-based classifications of hard red winter wheat cultivars. Euphytica 145:133–146

    Article  CAS  Google Scholar 

  • Gökgöl M (1939) Turkish wheats. Yeşilköy Seed Breeding Institute Publications 2(14). Tan Press, Istanbul (in Turkish)

  • Graner A, Ludwig WF, Melchinger AE (1994) Relationship among European barley germplasm, II: comparison of RFLP and pedigree data. Crop Sci 34:1199–1205

    Article  Google Scholar 

  • Hammer K (2000) Microsatellite markers: a new tool for distinguishing diploid wheat species. Genet Resour Crop Evol 47:497–505

    Article  Google Scholar 

  • Hao C, Wang L, Zhang X, You G, Dong Y, Jia J, Liu X, Shang X, Liu S, Cao Y (2006) Genetic diversity in Chinese modern wheat varieties revealed by microsatellite markers. Sci China, Ser C Life Sci 49:218–226

    Article  CAS  Google Scholar 

  • Harlan JR (1971) Agricultural origins: centers and noncenters. Science 174:468–473

    Article  PubMed  CAS  Google Scholar 

  • Huang XQ, Börner A, Röder MS, Ganal MW (2002) Assessing genetic diversity of wheat (Triticum aestivum L.) germplasm using microsatellite markers. Theor Appl Genet 105:699–707

    Article  PubMed  CAS  Google Scholar 

  • Kovach WL (1999) MVSP: A multivariate statistical package for Windows, version 3.1. Kovach Computing Services, Pentraeth, p 133

    Google Scholar 

  • Landjeva S, Korzun V, Ganeva G (2006) Evaluation of genetic diversity among Bulgarian winter wheat (Triticum aestivum L.) varieties during the period 1925–2003 using microsatellites. Genet Res Crop Evol 53:1605–1614

    Article  CAS  Google Scholar 

  • Li YC, Fahima T, Peng JH, Röder MS, Kirzhner VM, Beiles A, Korol AB, Nevo E (2000) Edaphitic microsatellite DNA divergence in wild emmer wheat, Triticum dicoccoides, at a microsite: Tabigha, Israel. Theor Appl Genet 101:1029–1038

    Article  CAS  Google Scholar 

  • Liu ZH, Anderson JA, Hu J, Friesen TL, Rasmussen JB, Faris JD (2005) A wheat intervarietal genetic linkage map based on microsatellite and target region amplified polymorphism markers and its utility for detecting quantitative trait loci. Theor Appl Genet 111:782–794

    Article  PubMed  CAS  Google Scholar 

  • Ma ZQ, Röder MS, Sorrells ME (1996) Frequencies and sequence characteristics of di-, tri-, and tetra-nucleotide microsatellites in wheat. Genome 39:123–130

    Article  PubMed  CAS  Google Scholar 

  • Özkan H, Brandolini A, Schafer-Pregl R, Salamini F (2002) AFLP analysis of a collection of tetraploid wheats indicates the origin of emmer and hard wheat domestication in southeast Turkey. Mol Biol Evol 19:1797–1801

    Article  PubMed  Google Scholar 

  • Plaschke J, Ganal MW, Röder MS (1995) Detection of genetic diversity in closely related bread wheat using microsatellite markers. Theor Appl Genet 91:1001–1007

    Article  CAS  Google Scholar 

  • Powell W, Morgante M, Andre C, Hanafey M, Vogel J, Tingey S, Rafalski A (1996) The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Mol Breed 2:225–238

    Article  CAS  Google Scholar 

  • Prasad M, Varshney RK, Roy JK, Balyan HS, Gupta PK (2000) The use of microsatellites for detecting DNA polymorphism, genotype identification and genetic diversity in wheat. Theor Appl Genet 100:584–592

    CAS  Google Scholar 

  • Röder MS, Korzun V, Wendehake K, Plaschke J, Tixier MH, Leroy P, Ganal MW (1998) A microsatellite map of wheat. Genetics 149:2007–2023

    Google Scholar 

  • Russell JR, Fuller JD, Macaulay M, Hatz BG, Jahoor A, Powell W, Waugh R (1997) Direct comparison of levels of genetic variation among barley accessions detected by RFLPs, AFLPs, SSRs and RAPDs. Theor Appl Genet 95:714–722

    Article  CAS  Google Scholar 

  • Saker M, Nagchtigall M, Kuehne TA (2005) Comparative assessment of DNA fingerprinting by RAPD, SSR and AFLP in genetic analysis of some barley genotypes. Egypt J Genet Cytol 34:81–97

    Google Scholar 

  • Salem KFM, El-Zanaty AM, Esmail RM (2008) Assessing wheat (Triticum aestivum L.) genetic diversity using morphological characters and microsatallite markers. World J Agric Sci 4:538–544

    Google Scholar 

  • Schuster I, Vieira ESN, da Silva GJ, Franco FA, Marchioro VS (2009) Genetic variability in Brazilian wheat cultivars assessed by microsatellite markers. Genet Molec Biol 32:557–563

    Article  CAS  Google Scholar 

  • Song W, Henry RJ (1995) Molecular analysis of the DNA polymorphism of wild barley (Hordeum spontaneum) germplasm using the polymerase chain reaction. Genet Resourc Crop Evol 42:273–280

    Article  Google Scholar 

  • Sorrells ME, Wilson WA (1997) Direct classification and selection of superior alleles for crop improvement. Crop Sci 37:691–697

    Article  Google Scholar 

  • Tams SH, Bauer E, Oettler G, Melchinger AE (2004) Genetic diversity in European winter triticale determined with SSR markers and coancestry coefficient. Theor Appl Genet 108:1385–1391

    Article  PubMed  CAS  Google Scholar 

  • Vavilov NI (1950) The phytogeographic basis of plant breeding. In: The origin, variation, immunity and breeding of cultivated plants (Trans. K Starr Chester). Chronica Botanica, Waltham, MA, USA

  • Weining S, Langridge P (1991) Identification and mapping of polymorphisms in cereals based on the polymerase chain reaction. Theor Appl Genet 82:209–216

    Article  CAS  Google Scholar 

  • You GX, Zhang XY, Wang LF (2004) An estimation of the minimum number of SSR loci needed to reveal genetic relationships in wheat varieties: information from 96 random samples with maximized genetic diversity. Mol Breed 14:397–406

    Article  Google Scholar 

  • Zhang XY, Li CW, Wang LF, Wang HM, You GX, Dong YS (2002) An estimation of the minimum number of SSR alleles needed to reveal genetic relationships in wheat varieties I: information from large-scale planted varieties and cornerstone breeding parents in Chinese wheat improvement and production. Theor Appl Genet 106:112–117

    PubMed  CAS  Google Scholar 

Download references

Acknowledgments

This research was supported by Tubitak Kamag (Project no. 105G075). The authors thank Dr. Necmettin Bolat from AARI for providing the plant materials.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Ahu Altinkut Uncuoglu.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Senturk Akfirat, F., Uncuoglu, A.A. Genetic Diversity of Winter Wheat (Triticum aestivum L.) Revealed by SSR Markers. Biochem Genet 51, 223–229 (2013). https://doi.org/10.1007/s10528-012-9557-6

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10528-012-9557-6

Keywords

Navigation