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Fine Mapping Identifies ClTFL1 Encodes a TERMINAL FLOWER 1 Protein as Putative Candidate Gene for Inflorescence Architecture and Tendril Development and in Watermelon

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Abstract

Tendrils are threadlike organs in vining plants that play essential role in climbing to reach more sunlight and growing space. However, the molecular basis underlying tendril organogenesis has only been studied in a few taxa. Here, a tendril-less watermelon mutant CG149 with determinate inflorescence was identified. Genetic analysis showed that the two traits of tendril-less and determinate inflorescence were co-segregated and were controlled by a single recessive gene, termed as Cltl/df. Bulked segregant sequencing and map-based cloning delimited the Cltl/df locus into a 61.6 kb region in watermelon chromosome 4. Gene sequence and expression analysis revealed that gene Cla97C04G076830 (ClTFL1) encodes a TERMINAL FLOWER 1 protein as the most probable candidate gene for Cltl/df. A single nucleotide mutation from C to A in the fourth exon was identified in ClTFL1, which resulted in a mutation from alanine to glutamic acid within a conserved motif of the TFL1 protein. Further qRT-PCR analysis showed that the expression level of ClTFL1 was significantly down-regulated in the inflorescence of the tendril-less mutant. The results of this study reveal the pleiotropic effects of ClTFL1 in regulating watermelon architecture and provide molecular mechanism of tendril organogenesis in angiosperms.

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Data Availability

The raw datasets of genome resequencing of the parents are accessible from the NCBI Sequence Read Archive (SRA) database under BioProject accession PRJNA772029.

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Acknowledgements

We thank Professor Yong Xu for providing the two wild watermelon germplasms.

Funding

This study was supported by the Key R&D project of Hubei province (2020BBA037), The National Natural Science Foundation of China (32002065), The Natural Science Foundation of Hubei province (2021CFB390), The Earmarked Fund for China Agriculture Research System (CARS-25), the Innovation Team Project of Hubei Agricultural Science and Technology Innovation Center (2021–620-000–001-01), and the Young Foundation of Hubei Academy of Agricultural Sciences (2020NKYJJ05).

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Contributions

ZD. and YW. designed the study. LY., WZ., QZ., ZC., and YZ. contributed to the experiments and data analysis. ZD. provided the seed for the experiment. LY. wrote the manuscript. YZ. and YW. revised the manuscript. All authors reviewed and approved the final manuscript.

Corresponding authors

Correspondence to Zhaoyi Dai or Yunqiang Wang.

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Conflict of interest

Author Y.Z. is employed by Molecular Marker (Wuhan) Biological Breeding Co., Ltd. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Yi, L., Zhou, W., Zhou, Q. et al. Fine Mapping Identifies ClTFL1 Encodes a TERMINAL FLOWER 1 Protein as Putative Candidate Gene for Inflorescence Architecture and Tendril Development and in Watermelon. J Plant Growth Regul 42, 4150–4160 (2023). https://doi.org/10.1007/s00344-022-10878-w

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  • DOI: https://doi.org/10.1007/s00344-022-10878-w

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