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Location of Vibrio anguillarum resistance-associated trait loci in half-smooth tongue sole Cynoglossus semilaevis at its microsatellite linkage map

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Abstract

A cultured female half-smooth tongue sole (Cynoglossus semilaevis) was crossed with a wild male, yielding the first filial generation of pseudo-testcrossing from which 200 fish were randomly selected to locate the Vibrio anguillarum resistance trait in half-smooth tongue sole at its microsatellite linkage map. In total, 129 microsatellites were arrayed into 18 linkage groups, ≥4 each. The map reconstructed was 852.85 cM in length with an average spacing of 7.68 cM, covering 72.07% of that expected (1 183.35 cM). The V. anguillarum resistance trait was a composite rather than a unit trait, which was tentatively partitioned into Survival time in Hours After V. anguillarum Infection (SHAVI) and Immunity of V. Anguillarum Infection (IVAI). Above a logarithm of the odds (LOD) threshold of 2.5, 18 loci relative to SHAVI and 3 relative to IVAI were identified. The 3 loci relative to IVAI explained 18.78%, 5.87% and 6.50% of the total phenotypic variation in immunity. The microsatellites bounding the 3 quantitative trait loci (QTLs) of IVAI may in future aid to the selection of V. anguillarum-immune half-smooth tongue sole varieties, and facilitate cloning the gene(s) controlling such immunity.

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References

  • Cervera M T, Storme V, Ivens B, Gusmão J, Liu B H, Hostyn V, van Slycken J, van Montagu M, Boerjan W. 2001. Dense genetic linkage maps of three Populus species (Populus deltoides. P. nigra and P. trichocarpa) based on AFLP and microsatellite markers. Genetics. 158(2): 787–809.

    Google Scholar 

  • Chakravarti A, Lasher L K, Reefer J E. 1991. A maximum likelihood method for estimating genome length using genetic linkage data. Genetics. 128(1): 175–182.

    Google Scholar 

  • Chen S L, Deng S P, Ma H Y, Tian Y S, Xu J Y, Yang J F, Wang Q Y, Ji X S, Shao C W, Wang X L, Wu P F, Deng H, Zhai J M. 2008a. Molecular marker-assisted sex control in half-smooth tongue sole (Cynoglossus semilaevis). Aquaculture. 283(1-4): 7–12.

    Article  Google Scholar 

  • Chen S L, Du M, Yang J F, Hu Q M, Xu Y, Zhai J M. 2010. Development and characterization for growth rate and disease resistance of families in half-smooth tongue sole (Cynoglossus semilaevis). Journal of Fisheries of China. 34(12): 1789–1794. (in Chinese with English abstract)

    Google Scholar 

  • Chen S L, Tian Y S, Xu T J, Deng H, Liu S T, Liu B W, Ji X S, Yu G C. 2008b. Development and characterization for growth rate and disease resistance of disease-resistance population and family in Japanese flounder (Paralichthys olivaceus). Journal Fisheries China. 32(5): 665–673. (in Chinese with English abstract)

    Google Scholar 

  • Chen S L, Tian Y S, Yang J F et al. 2009. Artificial gynogenesis and sex determination in half-smooth tongue sole (Cynoglossus semilaevis). Marine Biotechnology. 11(2): 243–251.

    Article  Google Scholar 

  • Chen S L, Zhang G J, Shao C W et al. 2014. Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle. Nature Genetics. 46(3): 253–260.

    Article  Google Scholar 

  • Chen S L. 2004). Progress in molecular breeding for diseaseresistant marine fishes and its prospects. Biotechnology. (9): 10–13. (in Chinese with English abstract)

    Google Scholar 

  • Fishman L, Kelly A J, Morgan E, Willis J H. 2001. A genetic map in the Mimulus guttatus species complex reveals transmission ratio distortion due to heterospecific interactions. Genetics. 159(4): 1701–1716.

    Google Scholar 

  • Li S Z, Wang H M. 1995. Fauna Sinica: Osteichthyes: Pleuronectiformes. Science Press, Beijing, China. p.334–366. (in Chinese)

    Google Scholar 

  • Liao X L, Ma H Y, Xu G B, Shao C W, Tian Y S, Ji X S, Yang J F, Chen S L. 2009. Construction of a genetic linkage map and mapping of a female-specific DNA marker in half-smooth tongue sole (Cynoglossus semilaevis). Mar ine Biotechnology. 11(6): 699–709.

    Article  Google Scholar 

  • Liu B S, Zhang T S, Kong J, Wang Q Y, Luan S, Cao B X. 2011. Estimation of genetic parameters for growth and upper thermal tolerance traits in turbot Scophthalmus maximus. Journal of Fisheries of China. 35(11): 1601–1606. (in Chinese with English abstract)

    Google Scholar 

  • Liu Y F, Zhang Y, Wu C X. 1993. Selection theories and breeding value prediction of threshold traits. Journal of China Agricultural University. 19 (S1): 44–51. (in Chinese with English abstract)

    Google Scholar 

  • Niu H X, Chang J, Ma S, Wang L. 2007. The biology and cultural ecology of Cynoglossus semilaevis Günther. Fisheries Science. 26(7): 425–426. (in Chinese with English abstract)

    Google Scholar 

  • Niu Y Z, Liao X L, Song W T, Wang L, Zhao Y W, Gao F T, Chen S L. 2012. Genetic mapping and QTLs analysis of growth traits in olive flounder (Paralichthys olivaceus). Journal of Fisheries of China. 3 6(11): 1640–1649. (in Chinese with English abstract)

    Article  Google Scholar 

  • Pang R Y, Song W T, Gao F T, Liao X L, Zhao Y W, Niu Y Z, Wang L, Zhao W, Tian Y S, Chen S L. 2012. Construction of genetic linkage map in Japanese flounder (Paralichthys olivaceus). Journal of Fishery Sciences of China. 19(6): 930–938. (in Chinese with English abstract)

    Article  Google Scholar 

  • Perry G M L, Martyniuk C M, Ferguson M M, Danzmann R G. 2005. Genetic parameters for upper thermal tolerance and growth-related traits in rainbow trout (Oncorhynchus mykiss). Aquaculture. 250(1-2): 120–128.

    Article  Google Scholar 

  • Pucholt P, Rönnberg-Wästljung A C, Berlin S. 2015. Single locus sex determination and female heterogamety in the basket willow (Salix viminalis L.). Heredity. 114(6): 575–583.

    Article  Google Scholar 

  • Sha Z X, Luo X H, Liao X L Wang S L, Wang Q L, Chen S L. 2011. Development and characterization of 60 novel ESTSSR markers in half-smooth tongue sole (Cynoglossus semilaevis). Journal of Fish Biology. 78(1): 322–331.

    Article  Google Scholar 

  • Song W T, Miao G D, Zhao Y W, Niu Y Z, Pang R Y, Liao X L, Shao C W, Chen S L. 2013. Construction of a microsatellite-based genetic linkage map for half-smooth tongue sole Cynoglossus semilaevis. Current Zoology. 59(1): 99–108.

    Article  Google Scholar 

  • Taggart J B, Verspoor E, Galvin P T, Morán P, Ferguson A. 1995. A minisatellite DNA marker for discriminating between European and North American Atlantic salmon (Salmo salar). Canadian Journal of Fisheries and Aquatic Sciences. 52(11): 2305–2311.

    Article  Google Scholar 

  • Tang X Q, Zhou L, Zhan W B. 2008. Isolation and characterization of pathogenic Listonella anguillarum of diseased half-smooth tongue sole (Cynoglossus semilaevis Günther). J ournal of Ocean Univ ersity of China. 7(3): 343–351.

    Article  Google Scholar 

  • Wang D G, Fan J B, Siao C J et al. 1998. Large-scale identification, mapping, and genotyping of singlenucleotide polymorphisms in the human genome. Science. 280(5366): 1077–1082.

    Article  Google Scholar 

  • Wang X A, Ma A J, Huang Z H, Zhou Z. 2010. Heritability and genetic correlation of survival in turbot (Scophthalmus maximus). Chinese Journal of Oceanology and Limnology. 28(6): 1200–1205.

    Article  Google Scholar 

  • Wang Y, Han Y, Li Y, Chen J X, Zhang X H. 2007. Isolation of Photobacterium damselae subsp. piscicida from diseased tongue sole (Cynoglossus semilaevis Gunther) in China. Acta Microbiologica Sinica. 47(5): 763–768. (in Chinese with English abstract)

    Google Scholar 

  • Zhang L S, Yang C J, Zhang Y, Li L, Zhang X M, Zhang Q L, Xiang J H. 2007. A genetic linkage map of Pacific white shrimp (Litopenaeus vannamei): sex-linked microsatellite markers and high recombination rates. Genetica. 131(1): 37–49.

    Article  Google Scholar 

  • Zhang L, Yang G, Guo S, Wei Q, Zou G. 2010. Construction of a genetic linkage map for silver carp (Hypophthalmichthys molitrix). Animial Genet ics. 41(5): 523–530.

    Article  Google Scholar 

  • Zhang N, Zhang L N, Tao Y, Guo L, Sun J, Li X, Zhao N, Peng J, Li X J, Zeng L, Chen J S, Yang G P. 2015. Construction of a high density SNP linkage map of kelp (Saccharina japonica) by sequencing Taq I site associated DNA and mapping of a sex determining locus. BMC Genomics. 16 (1): 189.

    Article  Google Scholar 

  • Zhong Q W, Yu Y, Zhang Q Q, Wang Z G, Yu H Y, Wang J S. 2009. Isolation and characterization of twenty novel microsatellite markers for half-smooth tongue sole (Cynoglossus semilaevis). Conservation Genetics. 10(5): 1617–1620.

    Article  Google Scholar 

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Correspondence to Songlin Chen  (陈松林) or Guanpin Yang  (杨官品).

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Supported by the National High Technology Research and Development Program of China (863 Program) (No. 2012AA10A403) and the Research Fund for the Doctoral Program of Higher Education of China (No. 20110132110006)

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Tang, Z., Guo, L., Liu, Y. et al. Location of Vibrio anguillarum resistance-associated trait loci in half-smooth tongue sole Cynoglossus semilaevis at its microsatellite linkage map. Chin. J. Ocean. Limnol. 34, 1309–1319 (2016). https://doi.org/10.1007/s00343-016-5160-8

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  • DOI: https://doi.org/10.1007/s00343-016-5160-8

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