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Resistance of QYm.nau-2D to wheat yellow mosaic virus was derived from an alien introgression into common wheat

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A Publisher Correction to this article was published on 23 March 2023

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Abstract

Key message

The QYm.nau-2D locus conferring wheat yellow mosaic virus resistance is an exotic introgression and we developed 11 diagnostic markers tightly linked to QYm.nau-2D.

Abstract

Wheat yellow mosaic virus (WYMV) is a serious disease of winter wheat in China. Breeding resistant varieties is the most effective strategy for WYMV control. A WYMV resistant locus QYm.nau-2D on the chromosome arm 2DL has been repeatedly reported but the mapped region is large. In the present study, we screened recombinants using a biparental population and mapped QYm.nau-2D into an 18.8 Mb physical interval. By genome-wide association studies of 372 wheat varieties for WYMV resistance in four environments, we narrowed down QYm.nau-2D into a 16.4 Mb interval. Haplotype analysis indicated QYm.nau-2D were present as six different states due to recombination during hybridization breeding. QYm.nau-2D was finally mapped into a linkage block of 11.2 Mb. Chromosome painting using 2D specific probes and collinearity analysis among the published sequences corresponding to QYm.nau-2D region indicated the block was an exotic introgression. The Illumina-sequenced reads of four diploid Aegilops species were mapped to the sequence of Fielder, a variety having the introgression. The mapping reads were significantly increased at the putative introgression regions of Fielder. Ae. uniaristata (NN) had the highest mapping reads, suggesting that QYm.nau-2D was possibly an introgression from genome N. We investigated the agronomic performances of different haplotypes and observed no linkage drag of the alien introgression for the 15 tested traits. For marker-assisted selection of QYm.nau-2D, we developed 11 diagnostic markers tightly linked to the locus. This research provided a case study of an exotic introgression, which has been utilized in wheat improvement for WYMV resistance.

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Data availability

Phenotype data generated or analyzed during this study are included in this published article (and its supplementary files). Genotypic data are available from the corresponding author on reasonable request.

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Funding

This work was supported by Intergovernmental Key Items for International Scientific and Technological Innovation Cooperation (2018YFE0107700), Fundamental Research Funds for the central University (No. KYZZ2022003), the National Natural Science Foundation of China (No. 32172076), National Key Research and Development Program of China (Grant No. 2020YFE0202900), Seed Industry Revitalization Project of Jiangsu Province (JBGS (2021)006), Jiangsu Provincial Key Research and Development Program (BE2022346), the Jiangsu Agricultural Technology System (JATS) (No. JATS[2022]464), the Joint Research of Improved Wheat Variety of Anhui.

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Author notes

  1. Keli Dai

    Present address: College of Agriculture, Shanxi Agricultural University, Taigu, Shanxi, 030801, China

Authors and Affiliations

  1. State Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute, Nanjing Agricultural University/JCIC-MCP, Nanjing, Jiangsu, 210095, China

    Yiming Chen, Jialun Ji, Dehui Kong, Xiong Tang, Mingxing Wen, Guoqing Wang, Keli Dai, Peiyao Shi, Xu Zhang, Huajian Zhang, Chengzhi Jiao, Zongkuan Wang, Li Sun, Chunxia Yuan, Haiyan Wang, Jin Xiao & Xiue Wang

  2. Zhenjiang Institute of Agricultural Science, Jurong, Jiangsu, 212400, China

    Mingxing Wen

  3. Key Laboratory of Crop Gene Resources and Germplasm Enhancement, Ministry of Agriculture and Rural Affairs/The National Key Facility for Crop Gene Resources and Genetic Improvement/Institute of Crop Sciences, Chinese Academy of Agricultural Science, Beijing, 100081, China

    Xueyong Zhang

  4. College of Plant Protection, Henan Agricultural University, Zhengzhou, Henan, 450002, China

    Bingjian Sun

  5. Yandu District Agricultural Science Research Institute, Yancheng, Jiangsu, 224011, China

    Xinru Fei & Hong Guo

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  1. Yiming Chen
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Contributions

Conceptualization—XW and JX; Methodology—YC, HW, CY, and PS; Investigation—YC, JJ, DK, XT, KD, MW, and XF; Formal analysis—YC, JX, CJ and GW; Visualization—YC, XZ, GW, and HZ; Writing original draft—YC and JX; Writing review and editing—XW, JX and HW; Funding acquisition—XW, LS and JX; Resources—ZW, MW, HG and HW; Supervision—XW, JX, BS, XYZ and HW.

Corresponding authors

Correspondence to Jin Xiao or Xiue Wang.

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Communicated by Thomas Miedaner.

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Chen, Y., Ji, J., Kong, D. et al. Resistance of QYm.nau-2D to wheat yellow mosaic virus was derived from an alien introgression into common wheat. Theor Appl Genet 136, 3 (2023). https://doi.org/10.1007/s00122-023-04286-1

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