Skip to main content
Log in

Epigenetic variation in the callus of Brassica napus under different inducement conditions

  • Plant Genetics
  • Published:
Russian Journal of Genetics Aims and scope Submit manuscript

Abstract

Tissue culture, a traditional technique broadly used for the genetic transformation and functional verification of target genes, induces epigenetic variations in transgenic acceptors of plants. This study compared the DNA methylation patterns during the callus formation of Brassica napus induced by different concentrations of 6-BA and 2,4-D through methylation-sensitive amplification polymorphism. The highest induction rate (85%) was observed in the hypocotyls cultured with 0.1 mg/L 2,4-D and the lowest methylation rate (25.09%) was detected in the hypocotyls cultured with 1.0 mg/L 6-BA. The methylation rates of the callus cultured with 0.2 and 0.05 mg/L 2,4-D were 29.99 and 28.31%, respectively. The callus induction rates were reduced to 79 and 80%. The methylation rates of the callus induced by 2.0 and 0.5 mg/L 6-BA were 28.17 and 33.98%, respectively. The callus induction rates were reduced to 76 and 74%. The expression analysis of methyltransferase under different induction conditions agreed with methylation modifications; therefore, the effects of hormones on callus induction may be partially indicated by methylation changes in B. napus genome.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Bairu, M.W., Fennell, C.W., and Staden, J.V., The effect of plant growth regulators on somaclonal variation in Cavendish banana (Musa AAA cv. ‘Zelig’), Sci. Hortic. (Amsterdam), 2006, vol. 108, pp. 347–351.

    Article  CAS  Google Scholar 

  2. Vlasova, T.I., Demidenko, Z.N., Kirnos, M.D., et al., In vitro DNA methylation by wheat nuclear cytosine DNA methyltransferase: effect of phytohormones, Gene, 1995, vol. 157, pp. 279–281.

    Article  CAS  PubMed  Google Scholar 

  3. Valledor, L., Hasbún, R., Meijón, M., et al., Involvement of DNA methylation in tree development and micropropagation, Plant Cell Tiss. Org., 2007, vol. 91, pp. 75–86.

    Article  CAS  Google Scholar 

  4. Skoog, F. and Miller, C.O., Chemical regulation of growth and organ formation in plant tissue cultured in vitro, Symp. Soc. Exp. Biol., 1957, vol. 11, pp. 118–130.

    CAS  PubMed  Google Scholar 

  5. Rapp, R.A. and Wendel, J.F., Epigenetics and plant evolution, New Phytol., 2005, vol. 168, pp. 81–91.

    Article  CAS  PubMed  Google Scholar 

  6. Miguel, C. and Marum, L., An epigenetic view of plant cells cultured in vitro: somaclonal variation and beyond, J. Exp. Bot., 2011, vol. 62, pp. 3713–3725.

    Article  CAS  PubMed  Google Scholar 

  7. Law, J.A. and Jacobsen, S.E., Establishing, maintaining and modifying DNA methylation patterns in plants and animals, Nat. Rev. Genet., 2010, vol. 11, pp. 204–220.

    CAS  PubMed  Google Scholar 

  8. Peraza-Echeverria, S., Herrera-Valencia, V.A., and Kay, A., Detection of DNA methylation changes in micropropagated banana plants using methylation-sensitive amplification polymorphism (MSAP), Plant Sci., 2001, vol. 161, pp. 359–367.

    Article  CAS  PubMed  Google Scholar 

  9. Schellenbaum, P., Mohler, V., Wenzel, G., et al., Variation in DNA methylation patterns of grapevine somaclones (Vitis vinifera L.), BMC Plant Biol., 2008, vol. 8, p. 78.

    Article  PubMed  PubMed Central  Google Scholar 

  10. Wang, Q.M. and Wang, L., An evolutionary view of plant tissue culture: somaclonal variation and selection, Plant Cell Rep., 2012, vol. 31, pp. 1535–1547.

    Article  CAS  PubMed  Google Scholar 

  11. Wang, X., Wu, R., Lin, X., et al., Tissue cultureinduced genetic and epigenetic alterations in rice purelines, F1 hybrids and polyploids, BMC Plant Biol., 2013, vol. 13, p. 77.

    Article  PubMed  Google Scholar 

  12. Gao, Y., Ran, L., Kong, Y., et al., Assessment of DNA methylation changes in tissue culture of Brassica napus, Russ. J. Genet., 2014, vol. 50, pp. 1186–1191.

    Article  CAS  Google Scholar 

  13. Qi, B., Huang, W., Zhu, B., et al., Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines, BMC Biol., 2012, vol. 10, p. 3.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Doyle, J.J. and Doyle, J.L., Isolation of plant DNA from fresh tissue, Focus, 1990, vol. 12, pp. 13–15.

    Google Scholar 

  15. Xiong, L.Z., Xu, C.G., Saghai Maroof, M.A., et al., Patterns of cytosine methylation in an elite rice hybrid and its parental lines, detected by a methylation-sensitive amplification polymorphism technique. Mol. Gen. Genet., 1999, vol. 261, pp. 439–446.

    CAS  PubMed  Google Scholar 

  16. Huang, H., Han, S.S., Wang, Y., et al., Variations in leaf morphology and DNA methylation following in vitro culture of Malus xiaojinensis, Plant Cell Tiss. Org., 2012, vol. 111, pp. 153–161.

    Article  CAS  Google Scholar 

  17. Bardini, M., Labra, M., Winfield, M., et al., Antibiotic- induced DNA methylation changes in calluses of Arabidopsis thaliana, Plant Cell Tiss. Org., 2003, vol. 72, pp. 157–162.

    Article  CAS  Google Scholar 

  18. Goll, M.G. and Bestor, T.H., Eukaryotic cytosine methyltransferases, Annu. Rev. Biochem., 2005, vol. 74, pp. 481–514.

    Article  CAS  PubMed  Google Scholar 

  19. Apashkin, V.V., Kutueva, L.I., and Vanyushin, B.F., Is the cytosine DNA methyltransferase gene MET1 regulated by DNA methylation in Arabidopsis thaliana plants?, Russ. J. Genet., 2011, vol. 47, pp. 279–288.

    Article  Google Scholar 

  20. Noy-Malka, C., Yaari, R., Itzhaki, R., et al., A single CMT methyltransferase homolog is involved in CHG DNA methylation and development of Physcomitrella patens, Plant Mol. Biol., 2014, vol. 84, pp. 719–735.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Y. P. Wang.

Additional information

The article is published in the original.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Ran, L., Li, M., Fan, H.X. et al. Epigenetic variation in the callus of Brassica napus under different inducement conditions. Russ J Genet 52, 802–809 (2016). https://doi.org/10.1134/S1022795416080111

Download citation

  • Received:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S1022795416080111

Keywords

Navigation