Skip to main content
Log in

Comparison of the accuracy of approximate methods TrESP and TrCAMM for evaluation of pigment coupling in light-harvesting complexes

  • Physical Chemistry
  • Published:
Doklady Physical Chemistry Aims and scope Submit manuscript

Abstract

Due to the large size of light-harvesting complexes, approximate methods are commonly used for calculating the coupling energies between their constituents. Two approximate methods are studied in this work: TrESP and the recently suggested TrCAMM method, based on the expansion of the one-particle density matrix. The quality of approximation of the electrostatic potential in the framework of these two approaches has been compared for two biological pigments as an example—chlorophyll a and bacteriochlorophyll a. It has been shown that both approaches provide high accuracy of approximation of the matrix elements of the electrostatic potential operator. In addition, it has been demonstrated that symmetrization of the one-particle density matrix in the framework of the TrCAMM method significantly improves the calculation accuracy and makes the computational procedure unambiguous.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Warshel, A. and Parson, W.W., J. Am. Chem. Soc., 1987, vol. 109, pp. 6143–6152.

    Article  CAS  Google Scholar 

  2. Momany, F.A., J. Phys. Chem., 1978, vol. 82, pp. 592–601.

    Article  CAS  Google Scholar 

  3. Madjet, M.E., Abdurahman, A., and Renger, T., J. Phys. Chem. B, 2006, vol. 110, pp. 17268–17281.

    Article  CAS  Google Scholar 

  4. Adolphs, J., Müh, F., Madjet, M.E., and Renger, T., Photosynth Res., 2007, vol. 95, pp. 197–209.

    Article  Google Scholar 

  5. Müh, F., Madjet, M.E., Adolphs, J., Abdurahman, A., Rabenstein, B., Ishikita, H., Knapp, E., and Renger, T., Proc. Nat. Acad. Sci. U.S.A., 2007, vol. 104, pp. 16862–16867.

    Article  Google Scholar 

  6. Kim, H.W., Kelly, A., Park, J.W., and Rhee, Y.M., J. Am. Chem. Soc., 2012, vol. 134, pp. 11640–11651.

    Article  CAS  Google Scholar 

  7. Rancova, O., Sulskus, J., and Abramavicius, D., J. Phys. Chem. B, 2012, vol. 116, pp. 7803–7814.

    Article  CAS  Google Scholar 

  8. Blasiak, B., Maj, M., Cho, M., and Gora, R.W., J. Chem. Theory Comput., 2015, vol. 11, pp. 3259–3266.

    Article  CAS  Google Scholar 

  9. Mulliken, R.S., J. Chem. Phys., 1955, vol. 23, pp. 1833–1840.

    Article  CAS  Google Scholar 

  10. Stone, A., The Theory of Intermolecular Forces, Oxford: Oxford Univ. Press, 2013.

    Book  Google Scholar 

  11. Cherezov, V., Clogston, J., Papiz, M.Z., and Carey, M., J. Mol. Biol., 2006, vol. 357, pp. 1605–1618.

    Article  CAS  Google Scholar 

  12. Wan, T., Li, M., Zhao, X., Zhang, J., Liu, Z., and Chang, W., Mol. Plant, 2014, vol. 7, pp. 916–919.

    Article  CAS  Google Scholar 

  13. Schmidt, M.W., Baldridge, K.K., Boatz, J.A., Elbert, S.T., Gordon, M.S., Jensen, J.H., Koseki, S., Matsunaga, N., Nguyen, K.A., Su, S., Windus, T.L., Dupuis, M., and Montgomery, J.A., J. Comput. Chem., 1993, vol. 14, pp. 1347–1363.

    Article  CAS  Google Scholar 

  14. Spackman, M.A., J. Comput. Chem., 1996, vol. 17, pp. 1–18.

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to A. S. Belov.

Additional information

Original Russian Text © A.S. Belov, D.V. Khokhlov, V.V. Poddubnyi, 2016, published in Doklady Akademii Nauk, 2016, Vol. 468, No. 1, pp. 48–51.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Belov, A.S., Khokhlov, D.V. & Poddubnyi, V.V. Comparison of the accuracy of approximate methods TrESP and TrCAMM for evaluation of pigment coupling in light-harvesting complexes. Dokl Phys Chem 468, 63–66 (2016). https://doi.org/10.1134/S0012501616050018

Download citation

  • Received:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S0012501616050018

Navigation