Skip to main content
Log in

Melampsora salicis-bakko, a new species on willows in Japan evidenced by morphological and molecular phylogenetic analyses

  • Original Article
  • Published:
Mycological Progress Aims and scope Submit manuscript

Abstract

Through the morphological and molecular examinations of Melampsora species on willows, we clarified the taxonomic identity of the rust specimens on Salix bakko, S. hultenii and S. leucopithecia from Japan and described the following rust fungus as a new species, Melampsora salicis-bakko. This rust fungus resembled M. caprearum in morphology of teliospores, but it differed from M. caprearum mainly in the density of spines on the urediniospores. Molecular phylogenetic analyses using the rDNA ITS region (complete ITS1, 5.8S rRNA gene and ITS2) revealed that M. salicis-bakko was monophyletic, and that this rust fungus was distinct from other Melampsora species, including M. caprearum.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

References

  • Azbukina ZM (1974) Rust fungi of the Soviet Far East (in Russian). Nauka, Moscow, pp 120–140

    Google Scholar 

  • Bagyanarayana G (2005) The species of Melampsora on Salix (Salicaceae). In: Pei MH, McCracken AR (eds) Rust diseases of willow and poplar. CABI, Wallingford, pp 20–50

    Google Scholar 

  • Braun U (1982) Die Rostpilze (Uredinales) der Deutschen Demokratischen Republik (in German). Feddes Repert Beih 93:213–334

    Article  Google Scholar 

  • Bubner B, Wunder S, Zaspel I, Zander M, Gloger J, Fehrenz S, Ulrichs C (2014) Melampsora rust species on biomass willows in central and north-eastern Germany. Fungal Biol 118:910–923. doi:10.1016/j.funbio.2014.08.002

    Article  PubMed  Google Scholar 

  • Chatasiri S, Ono Y (2008) Phylogeny and taxonomy of the Asian grapevine leaf rust fungus, Phakopsora euvitis, and its allies (Uredinales). Mycoscience 49:66–74. doi:10.1007/s10267-007-0390-4

    Article  CAS  Google Scholar 

  • Damadi SM,Pei MH,Smith JA, AbbasiM (2011) A new species ofMelampsorarust onSalix elbursensisfrom Iran. For Path 41:392–397

  • Farr DF, Rossman AY (2015) Fungal databases, systematic mycology and microbiology laboratory, ARS, USDA. Retrieved 24 Nov 2015, from http://nt.ars-grin.gov/fungaldatabases/

  • Feau N, Vialle A, Allaire M, Tanguay P, Joly DL, Frey P, Callan BE, Hamelin RC (2009) Fungal pathogen (mis-) identifications: a case study with DNA barcodes on Melampsora rusts of aspen and white poplar. Mycol Res 113:713–724. doi:10.1007/s13225-011-0129-6

    Article  CAS  PubMed  Google Scholar 

  • Gardes M, Bruns TD (1993) ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol Ecol 2:113–118. doi:10.1111/j.1365-294X.1993.tb00005.x

    Article  CAS  PubMed  Google Scholar 

  • González-García S, Mola-Yudego B, Dimitriou I, Aronsson P, Murphy R (2012) Environmental assessment of energy production based on long term commercial willow plantations in Sweden. Sci Total Environ 421:210–219. doi:10.1016/j.scitotenv.2012.01.041

    Article  PubMed  Google Scholar 

  • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98

    CAS  Google Scholar 

  • Hiratsuka N (1927). Studies on the Melampsoraceae of Japan. J Fac Agric Hokkaido Imp Univ Sapporo 21:1–41

  • Hiratsuka N, Kaneko S (1982) A taxonomic revision of Melampsora on willows in Japan. Rept Tottori Mycol Inst 20:1–32

    Google Scholar 

  • Hiratsuka N, Sato S, Katsuya K, Kakishima M, Hiratsuka Y, Kaneko S, Ono Y, Sato T, Harada Y (1992) The rust flora of Japan. Tsukuba Shuppankai, Tsukuba

    Google Scholar 

  • Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754–755. doi:10.1093/bioinformatics/17.8.754

    Article  CAS  PubMed  Google Scholar 

  • Hylander N, Jørstad I, Nannfeldt JA (1953) Enumerato Uredinearum Scandinavicarum. Oper Bot 1:1–102

    Google Scholar 

  • Ito S (1938) Mycological flora of Japan, II (in Japanese). Yokendo, Tokyo

    Google Scholar 

  • Kenaley SC, Smart LB, Hudler GW (2014) Genetic evidence for three discrete taxa of Melampsora (Pucciniales) affecting willows (Salix spp.) in New York State. Fungal Biol 118:704–720. doi:10.1016/j.funbio.2014.05.001

    Article  PubMed  Google Scholar 

  • Klebahn H (1914) Uredineae (in German). Kryptogamenflora der Mark Brandenburg Va. Borntraeger, Leipzig, pp 69–903

    Google Scholar 

  • Kobayashi T (2007) Index of fungi inhabiting woody plants in Japan. host, distribution and literature. Zenkoku-Noson-Kyoiku Kyokai, Tokyo

    Google Scholar 

  • Kuprevich VF, Tranzschel VG (1957) Rust fungi. 1. Family Melampsoraceae. In: Savich VP (ed) Cryptogamic plants of the USSR, vol 4. Botanicheskogo Instituta, Komarova, pp 423–464

    Google Scholar 

  • Kuzovkina Y, Quigley M (2005) Willows beyond wetlands: uses of Salix L. species for environmental projects. Water Air Soil Pollut 162:183–204. doi:10.1007/s11270-005-6272-5

    Article  CAS  Google Scholar 

  • Lee SK, Kakishima M (1999) Surface structures of peridial cells of Gymnosporangium and Roestelia (Uredinales). Mycoscience 40:121–131. doi:10.1016/j.funbio.2014.05.001

    Article  Google Scholar 

  • Liang YM (2006) Taxonomic evaluation of morphologically similar species of Pucciniastrum in Japan based on comparative analyses of molecular phylogeny and morphology. Doctoral dissertation, University of Tsukuba, Tsukuba, Japan

  • Liro JI (1908) Uredineae fennicae Finlands rostsvampar (in Swedish). Finska Litteratursällskapets Tryckeri, Helsingfors

    Google Scholar 

  • Liu WX (2005) A taxonomic study of Melampsora species on Salicaceae plants in Inner Mongolia (in Chinese). Master thesis, Inner Mongolia Agricultural University, Huhhot

  • Milne JM, Helfer S, Kirk C, Hollingsworth PM, Ennos RA (2012) Molecular evidence indicates that subarctic willow communities in Scotland support a diversity of host-associated Melampsora rust taxa. Fungal Biol 116:603–612. doi:10.1016/j.funbio.2012.02.008

    Article  CAS  PubMed  Google Scholar 

  • Pei MH (2005) A brief review of Melampsora rusts on Salix. In: Pei MH, McCracken AR (eds) Rust diseases of willow and poplar. CABI, Wallingford, pp 20–50

    Chapter  Google Scholar 

  • Pei MH, Bayon C, Ruiz C (2005) Phylogenetic relationships in some Melampsora rusts on Salicaceae assessed using rDNA sequence information. Mycol Res 109:401–409. doi:10.1017/S0953756205002479

    Article  CAS  PubMed  Google Scholar 

  • Posada D, Crandall KA (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817–818. doi:10.1093/bioinformatics/14.9.817

    Article  CAS  PubMed  Google Scholar 

  • Royle DJ, Hubbes M (1992) Diseases and pests in energy crop plantations. Biomass Bioenergy 2:45–54. doi:10.1016/0961-9534(92)90087-7

    Article  Google Scholar 

  • Samils B, Lagercrantz U, Gullberg U (2002) Genetic relationships among genetically distinct forms of Melampsora larici-epitea and related species based on AFLP data. For Pathol 32:379–386

  • SmithJ, BlanchetteR, NewcombeG (2004) Molecular and morphological characterization of thewillow rust fungus,Melampsora epitea, from arctic and temperate hosts in North America.Mycologia96:1330–1338

  • Spaulding P (1961) Foreign diseases of forest trees of the world. USDA Agric Handb 197:1–361

    Google Scholar 

  • Sydow P, Sydow H (1915) Monographia Uredinearum. III: Melampsoraceae, Zaghouaniaceae, Coleosporiaceae. Borntraeger, Leipzig

    Google Scholar 

  • Tai FL (1979) Sylloge fungorum sinicorum. Science Press, Beijing

    Google Scholar 

  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882. doi:10.1093/nar/25.24.4876

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Thümen F (1879) Melampsora salicina, der Weidenrost. Eine monographische Studie. Mitt Forstlichen Versuchswesen Österreichs 2:25–46

    Google Scholar 

  • Tian CM, Shang YZ, Zhuang JY, Wang Q, Kakishima M (2004) Morphological and molecular phylogenetic analysis of Melampsora species on poplars in China. Mycoscience 45:55–66. doi:10.1007/S10267-003-0150-Z

    Article  Google Scholar 

  • Verwijst T (2001) Willows: an underestimated resource for environment and society. For Chron 77:281–285. doi:10.5558/tfc77281-2

    Article  Google Scholar 

  • Virtudazo EV, Nakamura H, Kakishima M (2001) Phylogenetic analysis of sugarcane rusts based on sequences of ITS, 5.8 S rDNA and D1/D2 regions of LSU rDNA. J Gen Plant Pathol 67:28–36. doi:10.1007/PL00012983

    Article  CAS  Google Scholar 

  • Wahyuno D, Kakishima M, Ono Y (2001) Morphological analyses of urediniospores and teliospores in seven Phragmidium species parasitic on ornamental roses. Mycoscience 42:519–533. doi:10.1007/BF02460950

    Article  Google Scholar 

  • White TJ, Bruns T, Lee SB, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic, New York, pp 315–322

    Google Scholar 

  • Wilson M, Henderson DM (1966) The British rust fungi. Cambridge University Press, Cambridge

    Google Scholar 

  • Wright L (2006) Worldwide commercial development of bioenergy with a focus on energy crop-based projects. Biomass Bioenergy 30:706–714. doi:10.1016/j.biombioe.2005.08.008

    Article  Google Scholar 

  • Yamaoka Y, Shinyama Y, Obata K (2010) Species biology of a heteroecious rust, Melampsora chelidonii-pierotii in riparian vegetation. Trans Mycol Soc Jpn 51:35–47

  • Zhao P, Tian CM, Yao YJ, Wang Q, Yamaoka Y, Kakishima M (2013) New records of Melampsora species on willows in China. Mycotaxon 123:81–89. doi:10.5248/123.81

    Article  Google Scholar 

  • Zhao P, Tian CM, Yao YJ, Wang Q, Kakishima M, Yamaoka Y (2014) Melampsora salicis-sinicae (Melampsoraceae, Pucciniales), a new rust fungus found on willows in China. Mycoscience 55:390–399. doi:10.1016/j.myc.2013.12.005

    Article  Google Scholar 

  • Zhao P, Tian CM, Yao YJ, Wang Q, Yamaoka Y, Kakishima M (2015a) Two new species and one new record of Melampsora on willows from China. Mycol Prog 14:66. doi:10.1007/s11557-015-1091-6

    Article  Google Scholar 

  • Zhao P, Wang QH, Tian CM, Wang Q, Yamaoka Y, Kakishima M (2015b) A morphological and molecular survey of Japanese Melampsora species on willows reveals a new species and two new records. Mycol Prog 14:101. doi:10.1007/s11557-015-1121-4

    Article  Google Scholar 

  • Zhuang WY (2005) Fungi of northwestern China. Mycotaxon, Ithaca

    Google Scholar 

  • Ziller WG (1974) The tree rusts of western Canada. Environment Canada, Forestry Service, Ottawa

    Google Scholar 

  • Zwickl DJ (2006) Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. PhD thesis, University of Texas at Austin, Texas

Download references

Acknowledgments

We express our gratitude to Dr. Ming-Hao Pei (Rothamsted Research, Harpenden, Hertfordshire, UK), Dr. Zhi-Min Cao (Forestry College, Northwest A & F University, Yangling, China) and Dr. Tsuyoshi Hosoya (National Museum of Nature and Science, Tsukuba, Japan) for providing dried specimens for this study.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Peng Zhao.

Ethics declarations

Disclosure

The authors declare no conflict of interest. All the experiments undertaken in this study comply with the current laws of Japan.

Additional information

Section Editor: Franz Oberwinkler

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Zhao, P., Wang, QH., Tian, CM. et al. Melampsora salicis-bakko, a new species on willows in Japan evidenced by morphological and molecular phylogenetic analyses. Mycol Progress 15, 32 (2016). https://doi.org/10.1007/s11557-016-1175-y

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1007/s11557-016-1175-y

Keywords

Navigation