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Microbial composition and nitrogen removal pathways in a novel sequencing batch reactor integrated with semi-fixed biofilm carrier: evidence from a pilot study for low- and high-strength sewage treatment

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Abstract

The sequencing batch reactor (SBR) activated sludge process is a well-established technology for sewage treatment. One of the drawbacks of SBRs, however, total nitrogen (TN) removals is insufficient. By means of introducing four improvements, including semi-fixed biofilm carrier, sludge elevation mixing and change for the mode of influent and effluent, compliant standard for TN discharge was obtained in this novel SBR configuration during low- and high-strength sewage load. To illustrate the microbial compositions and functions of the attached biofilm on semi-fixed carrier and the suspended aggregates, as well as the nitrogen removal pathway, high throughput 16S rRNA gene amplicon sequencing, PICRUSt2 algorithm, and KEGG database were applied. The results revealed that (i) the microbial communities from suspended aggregates and biofilm samples were significantly different from each other; (ii) during low-strength sewage loads, TN removal was mainly by nitrification–denitrification. The suspended aggregates was responsible for denitrification, while the biofilm was focused on ammonium oxidation; (iii) during high-strength sewage loads, function of nitrate reductase from suspended aggregates was faded, and anammox and N assimilation by biofilm became dominant. Meanwhile, TN removal referring to the formation of l-glutamine via assimilation was the main pathway.

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All data generated or analyzed during this study are included in this manuscript and its supplementary information file.

References

  • Chen S, Sun DZ, Chung JS (2007) Anaerobic treatment of highly concentrated aniline wastewater using packed-bed biofilm reactor. Process Biochem 42(12):1666–1670

    Article  CAS  Google Scholar 

  • Chen YS, Zhao Z, Peng YK, Li J, Xiao L, Yang LY (2016) Performance of a full-scale modified anaerobic/anoxic/oxic process: High-throughput sequence analysis of its microbial structures and their community functions. Biores Technol 220:225–232

    Article  CAS  Google Scholar 

  • Chen ZG, Wang XJ, Chen XZ, Chen J, Feng XH, Peng XX (2018) Nitrogen removal via nitritation pathway for low-strength ammonium wastewater by adsorption, biological desorption and denitrification. Biores Technol 267:541–549

    Article  CAS  Google Scholar 

  • Cui B, Yang Q, Liu XH, Huang ST, Yang YB, Liu ZB (2020) The effect of dissolved oxygen concentration on long-term stability of partial nitrification process. J Environ Sci 90:343–351

    Article  Google Scholar 

  • Cui YX, Biswal BK, van Loosdrecht MCM, Chen GH, Wu D (2019) Long term performance and dynamics of microbial biofilm communities performing sulfur-oxidizing autotrophic denitrification in a moving-bed biofilm reactor. Water Res 166:115038

    Article  CAS  Google Scholar 

  • De Sotto R, Ho J, Lee W, Bae S (2018) Discriminating activated sludge flocs from biofilm microbial communities in a novel pilot-scale reciprocation MBR using high-throughput 16S rRNA gene sequencing. J Environ Manage 217:268–277

    Article  CAS  Google Scholar 

  • Douglas GM, Maffei VJ, Zaneveld J, Yurgel SN, Brown JR, Taylor CM, Huttenhower C, Langille MG (2019) PICRUSt2: an improved and extensible approach for metagenome inference. BioRxiv 672295

  • Eichorst SA, Trojan D, Roux S, Herbold CW, Rattei T, Woebken D (2018) Genomic insights into the Acidobacteria reveal strategies for their success in terrestrial environments. Environ Microbiol 20(3):1041–1063

    Article  CAS  Google Scholar 

  • Feng Q, Song YC, Bae BU (2016) Influence of applied voltage on the performance of bioelectrochemical anaerobic digestion of sewage sludge and planktonic microbial communities at ambient temperature. Biores Technol 220:500–508

    Article  CAS  Google Scholar 

  • Gao YJ, Kong X, Zhou AJ, Yue XP, Luo YH, Defemur Z (2020) Enhanced degradation of quinoline by coupling microbial electrolysis cell with anaerobic digestion simultaneous. Bioresour Technol 306:123077

    Article  CAS  Google Scholar 

  • Gu YF, Wei Y, Xiang QJ, Zhao K, Yu XM, Zhang XP, Li CN, Chen Q, Xiao H, Zhang XH (2019) C: N ratio shaped both taxonomic and functional structure of microbial communities in livestock and poultry breeding wastewater treatment reactor. Sci Total Environ 651(1):625–633

    Article  CAS  Google Scholar 

  • Guo JH, Peng YZ, Wang SY, Zheng YN, Huang HJ, Wang ZW (2009) Long-term effect of dissolved oxygen on partial nitrification performance and microbial community structure. Biores Technol 100(11):2796–2802

    Article  CAS  Google Scholar 

  • Guo Q, Hu HY, Shi ZJ, Yang CC, Li P, Huang M, Ni WM, Shi ML, Jin RC (2016) Towards simultaneously removing nitrogen and sulfur by a novel process: Anammox and autotrophic desulfurization-denitrification (AADD). Chem Eng J 297(297):207–216

    Article  CAS  Google Scholar 

  • Kanehisa M, Sato Y, Kawashima M, Furumichi M, Tanabe M (2016) KEGG as a reference resource for gene and protein annotation. Nucleic Acids Res 44:457–462

    Article  CAS  Google Scholar 

  • Lage OM,van Niftrik L, Jogler C, Devos DP (2019) Planctomycetes, encyclopedia of microbiology (Fourth Edition). Academic Press, pp 614–626

  • Jiang JS, Wang Y, Liu J, Yang XL, Ren YQ, Miao HH, Pan YW, Lv JH, Yan GX, Ding LJ, Li YB (2019) Exploring the mechanisms of organic matter degradation and methane emission during sewage sludge composting with added vesuvianite: insights into the prediction of microbial metabolic function and enzymatic activity. Bioresour Technol 286:121397

    Article  CAS  Google Scholar 

  • Li W, Zhuang JL, Zhou YY, Meng FG, Kang D, Zheng P, Shapleigh JP, Liu YD (2020) Metagenomics reveals microbial community differences lead to differential nitrate production in anammox reactors with differing nitrogen loading rates. Water Res 169:115279

    Article  CAS  Google Scholar 

  • Li YT, Wang Y, Fu L, Gao YZ, Zhao HX, Zhou WZ (2017a) Aerobic-heterotrophic nitrogen removal through nitrate reduction and ammonium assimilation by marine bacterium Vibrio sp Y1–5. Biores Technol 230:103–111

    Article  CAS  Google Scholar 

  • Li X, Sun S, Yuan H, Badgley DB, He Z (2017b) Mainstream upflow nitritation-anammox system with hybrid anaerobic pretreatment: Long-term performance and microbial community dynamics. Water Res 125:298–308

    Article  CAS  Google Scholar 

  • Liu CC, Yu DS, Wang YY, Chen GH, Tang P, Huang S (2020) A novel control strategy for the partial nitrification and anammox process (PN/A) of immobilized particles: Using salinity as a factor. Bioresour Technol 302:122864

    Article  CAS  Google Scholar 

  • Li H, Chi ZF, Li JL, Wu HT, Yan BX (2019) Bacterial community structure and function in soils from tidal freshwater wetlands in a Chinese delta: potential impacts of salinity and nutrient. Sci Total Environ 696:134029

    Article  CAS  Google Scholar 

  • Liu ZP, Wang BJ, Liu YH, Liu SJ (2005) Novosphingobium taihuense sp. nov., a novel aromatic-compound-degrading bacterium isolated from Taihu Lake, China. Int J Syst Evol Microbiol 55(3):1229–1232

    Article  CAS  Google Scholar 

  • Makowska M, Maciejewska E (2016) Effect of aeration time on the operation of SBR and SBBR reactor. Acta Scientiarum Polonorum Formatio Circumiectus 15(2):105–116

    Article  Google Scholar 

  • Maslon A, Tomaszek JA, Zamorska J, Zdeb M, Piech A, Opalinski I, Jurczyk Ł (2019) The impact of powdered keramsite on activated sludge and wastewater treatment in a sequencing batch reactor. J Environ Manage 237:305–312

    Article  CAS  Google Scholar 

  • Matassa S, Verstraete W, Pikaar I, Boon N (2016) Autotrophic nitrogen assimilation and carbon capture for microbial protein production by a novel enrichment of hydrogen-oxidizing bacteria. Water Res 101:137–146

    Article  CAS  Google Scholar 

  • McIlroy SJ, Albertsen M, Andresen EK, Saunders AM, Kristiansen R, StokholmBjerregaard M, Nielsen KL, Nielsen PH (2014) ’Candidatus Competibacter’-lineage genomes retrieved from metagenomes reveal functional metabolic diversity. ISME J 8(3):613–624

    Article  CAS  Google Scholar 

  • Meng YB, Zhou ZB, Meng FG (2019) Impacts of diel temperature variations on nitrogen removal and metacommunity of anammox biofilm reactors. Water Res 160:1–9

    Article  CAS  Google Scholar 

  • Miao LZ, Wang PF, Hou J, Yao Y, Liu ZL, Liu SQ, Li TF (2019) Distinct community structure and microbial functions of biofilms colonizing microplastics. Sci Total Environ 650(2):2395–2402

    Article  CAS  Google Scholar 

  • Mihelcic JR, Zimmerman JB (2014) Environmental engineering: fundamentals, sustainability, design, 2nd edn. Wiley Global Education, Hoboken, New jersey

    Google Scholar 

  • Mulder A, van de Graaf AA, Robertson LA, Kuenen JG (1995) Anaerobic ammonium oxidation discovered in a denitrifying fluidized bed reactor. FEMS Microbiol Ecol 16(3):177–183

    Article  CAS  Google Scholar 

  • Narihiro T, Terada T, Ohashi A, Kamagata Y, Nakamura K, Sekiguchi Y (2012) Quantitative detection of previously characterized syntrophic bacteria in anaerobic wastewater treatment systems by sequence-specific rRNA cleavage method. Water Res 46(7):0–2175

    Article  CAS  Google Scholar 

  • Nguyen LN, Commault AS, Johir AH, Bustamante H, Aurisch R, Lowrie R, Nghiem LD (2019) Application of a novel molecular technique to characterise the effect of settling on microbial community composition of activated sludge. J Environ Manag 251:109594

    Article  CAS  Google Scholar 

  • Onnis-Hayden A, Majed N, Schramm A, Gu AZ (2011) Process optimization by decoupled control of key microbial populations: distribution of activity and abundance of polyphosphate-accumulating organisms and nitrifying populations in a full-scale IFAS-EBPR plant. Water Res 45(13):0–3854

    Article  CAS  Google Scholar 

  • Qiu YY, Zhang L, Mu XT, Li GB, Guan XQ, Hong JY, Jiang F (2020) Overlooked pathways of denitrification in a sulfur-based denitrification system with organic supplementation. Water Res 169:115084

    Article  CAS  Google Scholar 

  • Rud I, Kolarevic J, Holan AB, Berget I, Calabrese S, Terjesen BF (2017) Deepsequencing of the bacterial microbiota in commercial-scale recirculating and semiclosed aquaculture systems for Atlantic salmon post-smolt production. Aquacult Eng 78:50–62

    Article  Google Scholar 

  • Shu DT, He YL, Yue H, Wang QY (2015) Microbial structures and community functions of anaerobic sludge in six full-scale wastewater treatment plants as revealed by 454 high-throughput pyrosequencing. Biores Technol 186:163–172

    Article  CAS  Google Scholar 

  • Strous M, Pelletier E, Mangenot S, Rattei T, Lehner A, Taylor MW, Horn M, Daims H, Bartol-Mavel D, Wincker P, Barbe V, Fonknechten N, Vallenet D, Segurens B, Schenowitz-Truong C, Medigue C, Collingro A, Snel B, Dutilh BE, Op den Camp HJM, van der Drift C, Cirpus I, van de Pas-Schoonen KT, Harhangi HR, van Niftrik L, Schmid M, Keltjens J, van de Vossenberg J, Kartal B, Meier H, Frishman D, Huynen MA, Mewes HW, Weissenbach J, Jetten MSM, Wagner M, Le Paslier D (2006) Deciphering the evolution and metabolism of an anammox bacterium from a community genome. Nature 440(7085):790–794

    Article  Google Scholar 

  • Sun HW, Shi WY, Cai CJ, Ge SJ, Ma B, Li XQ, Ding J (2020) Responses of microbial structures, functions, metabolic pathways and community interactions to different C/N ratios in aerobic nitrification. Bioresour Technol 123422

  • Sytek-Szmeichel K, Podedworna J, Zubrowska-Sudol M (2016) Efficiency of wastewater treatment in SBR and IFAS-MBSBBR systems in specified technological conditions. Water Sci Technol 73(6):1349–1356

    Article  CAS  Google Scholar 

  • Tao C, Hamouda MA (2019) Steady-state modeling and evaluation of partial nitrification-anammox (PNA) for moving bed biofilm reactor and integrated fixed-film activated sludge processes treating municipal wastewater. J Water Process Eng 100854

  • Thelusmond JR, Strathmann TJ, Cupples AM (2016) The identification of carbamazepine biodegrading phylotypes and phylotypes sensitive to carbamazepine exposure in two soil microbial communities. Sci Total Environ 571:1241–1252

    Article  CAS  Google Scholar 

  • Tian SN, Tian Z, Yang H, Yang M, Zhang Y (2017) Detection of viable bacteria during sludge ozonation by the combination of ATP Assay with PMA-Miseq Sequencing. Water 9(3):166

    Article  CAS  Google Scholar 

  • Tombola R, Buttiglieri G, Auset M, Gonzalez-Olmos R (2019) Recycled corrugated wire hose cover as biological carriers for greywater treatment in a sequential batch biofilm reactor. J Environ Manag 240:475–484

    Article  CAS  Google Scholar 

  • Wang S, Chen MF, Zheng KK, Wan CL, Li J (2020) Promising carbon utilization for nitrogen recovery in low strength wastewater treatment: ammonia nitrogen assimilation, protein production and microbial community structure. Sci Total Environ 710:136306

    Article  CAS  Google Scholar 

  • Xia SQ, Shi Y, Fu YG, Ma XM (2005) DGGE analysis of 16S rDNA of ammonia-oxidizing bacteria in chemical–biological flocculation and chemical coagulation systems. Appl Microbiol Biotechnol 69(1):99–105

    Article  CAS  Google Scholar 

  • Yang XY, Chen Y, Guo FC, Liu XB, Su XX, He Q (2020) Metagenomic analysis of the biotoxicity of titanium dioxide nanoparticles to microbial nitrogen transformation in constructed wetlands. J Hazard Mater 384:121376

    Article  CAS  Google Scholar 

  • Yuan Y, Liu JJ, Ma B, Liu Y, Wang B, Peng YZ (2016) Improving municipal wastewater nitrogen and phosphorous removal by feeding sludge fermentation products to sequencing batch reactor (SBR). Biores Technol 222:326–334

    Article  CAS  Google Scholar 

  • Zhang DC, Su H, Antwi P, Xiao LW, Liu ZW, Li JZ (2019) High-rate partial-nitritation and efficient nitrifying bacteria enrichment/out-selection via pH-DO controls: efficiency, kinetics, and microbial community dynamics. Sci Total Environ 692:741–755

    Article  CAS  Google Scholar 

  • Zhang JH, Zhang L, Miao YY, Sun YW, Zhang Q, Wu L, Peng YZ (2019) Enhancing sewage nitrogen removal via anammox and endogenous denitrification: Significance of anaerobic/oxic/anoxic operation mode. Bioresour Technol 289:121665

  • Zhang K, Yang B, Ma YG, Lyu LT, Pan Y, Wang YZ, Li H, Zhu T (2018) A novel anammox process combined with vibration technology. Bioresour Technol 256:277–284

    Article  CAS  Google Scholar 

  • Zhang L, Shen Z, Fang WK, Gao G (2019) Composition of bacterial communities in municipal wastewater treatment plant. Sci Total Environ 689:1181–1191

    Article  CAS  Google Scholar 

  • Zhang ZW, Xu CY, Zhong D, Han YX, Han HJ, Zheng MQ, Zhu H (2019) Enhanced nitrogen removal of coal pyrolysis wastewater with low COD to nitrogen ratio by partial nitrification-denitrification bioprocess assisted with polycaprolactone. Environ Sci Pollut Res 26:21655–21667

    Article  CAS  Google Scholar 

  • Zhao L, Liu YW, Li N, Fan XY, Li X (2020) Response of bacterial regrowth, abundant and rare bacteria and potential pathogens to secondary chlorination in secondary water supply system. Sci Total Environ 719:137499

    Article  CAS  Google Scholar 

  • Zhong XZ, Li XX, Zeng Y, Wang SP, Sun ZY, Tang YQ (2020) Dynamic change of bacterial community during dairy manure composting process revealed by high-throughput sequencing and advanced bioinformatics tools. Bioresour Technol 306:123091

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Acknowledgements

The authors would like to acknowledge the financial support for this work provided by the National Natural Science Foundation of China (Grants No.51778164 and Grants No.51608140) and the Basic and Applied Basic Research Program of Guangdong, China (Grants No. 2021A1515010499).

Funding

Major Research Plan,51778164,Zhi-min Sun,Young Scientists Fund,51608140,Rui-jian Zhang,Basic and Applied Basic Research Program of Guangdong,2021A1515010499,Rui-jian Zhang

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Peng-fei Chen: investigation, writing, reviewing, and editing.

Rui-jian Zhang: conceptualization, methodology, software, supervision.

Zhi-li Du and Guang-hua Wang: data analysis, validation, reviewing, and editing.

Hao-tao Dong, Bin Cui, and Ru-pei Fan: visualization, investigation.

Lu-xin Li and Qian-bin Wang: writing—original draft preparation.

Ying-shi Liu and Zhi-min Sun: Software, data analysis.

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Correspondence to Rui-jian Zhang.

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Chen, Pf., Zhang, Rj., Du, Zl. et al. Microbial composition and nitrogen removal pathways in a novel sequencing batch reactor integrated with semi-fixed biofilm carrier: evidence from a pilot study for low- and high-strength sewage treatment. Environ Sci Pollut Res 29, 49105–49115 (2022). https://doi.org/10.1007/s11356-022-19382-w

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