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Fast-slow analysis as a technique for understanding the neuronal response to current ramps

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Abstract

The standard protocol for studying the spiking properties of single neurons is the application of current steps while monitoring the voltage response. Although this is informative, the jump in applied current is artificial. A more physiological input is where the applied current is ramped up, reflecting chemosensory input. Unsurprisingly, neurons can respond differently to the two protocols, since ion channel activation and inactivation are affected differently. Understanding the effects of current ramps, and changes in their slopes, is facilitated by mathematical models. However, techniques for analyzing current ramps are under-developed. In this article, we demonstrate how current ramps can be analyzed in single neuron models. The primary issue is the presence of gating variables that activate on slow time scales and are therefore far from equilibrium throughout the ramp. The use of an appropriate fast-slow analysis technique allows one to fully understand the neural response to ramps of different slopes. This study is motivated by data from olfactory bulb dopamine neurons, where both fast ramp (tens of milliseconds) and slow ramp (tens of seconds) protocols are used to understand the spiking profiles of the cells. The slow ramps generate experimental bifurcation diagrams with the applied current as a bifurcation parameter, thereby establishing asymptotic spiking activity patterns. The faster ramps elicit purely transient behavior that is of relevance to most physiological inputs, which are short in duration. The two protocols together provide a broader understanding of the neuron’s spiking profile and the role that slowly activating ion channels can play.

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Data availability

The data sets generated for this study are available on request.

Code availability

The XPPAUT code can be downloaded as freeware from www.math.fsu.edu/~bertram/software/neuron. All simulation data available upon request.

References

  • Berg, J., Hung, Y. P., & Yellen, G. (2009). A genetically encoded fluorescent reporter of ATP: ADP ratio. Nature Methods, 6(2), 161–166.

    Article  CAS  Google Scholar 

  • Bertram, R., & Rubin, J. E. (2017). Multi-timescale systems and fast-slow analysis. Mathematical Biosciences, 287, 105–121.

    Article  Google Scholar 

  • Carroll, B. J., Bertram, R., & Hyson, R. L. (2018). Intrinsic physiology of inhibitory neurons changes over auditory development. Journal of Neurophysiology, 119(1), 290–304.

    Article  CAS  Google Scholar 

  • Connor, J., & Stevens, C. (1971). Voltage clamp studies of a transient outward membrane current in gastropod neural somata. The Journal of Physiology, 213(1), 21–30.

    Article  CAS  Google Scholar 

  • Cury, K. M., & Uchida, N. (2010). Robust odor coding via inhalation-coupled transient activity in the mammalian olfactory bulb. Neuron, 68(3), 570–585.

    Article  CAS  Google Scholar 

  • Daou, A., Ross, M. T., Johnson, F., Hyson, R. L., & Bertram, R. (2013). Electrophysiological characterization and computational models of HVC neurons in the zebra finch. Journal of Neurophysiology, 110(5), 1227–1245.

    Article  CAS  Google Scholar 

  • Desroches, M., Guckenheimer, J., Krauskopf, B., Kuehn, C., Osinga, H. M., & Wechselberger, M. (2012). Mixed-mode oscillations with multiple time scales. SIAM Review, 54(2), 211–288.

    Article  Google Scholar 

  • Dovzhenok, A., & Kuznetsov, A. S. (2012). Exploring neuronal bistability at the depolarization block. PLoS One, 7(8), e42811.

  • Golomb, D., Yue, C., & Yaari, Y. (2006). Contribution of persistent Na+ current and M-type K+ current to somatic bursting in CA1 pyramidal cells: Combined experimental and modeling study. Journal of Neurophysiology, 96(4), 1912–1926.

    Article  CAS  Google Scholar 

  • Harvey, E., Kirk, V., Wechselberger, M., & Sneyd, J. (2011). Multiple timescales, mixed mode oscillations and canards in models of intracellular calcium dynamics. Journal of Nonlinear Science, 21(5), 639–683.

    Article  CAS  Google Scholar 

  • Hasan, C. R., Krauskopf, B., & Osinga, H. M. (2018). Saddle Slow Manifolds and Canard Orbits in R4 and Application to the Full Hodgkin-Huxley Model. The Journal of Mathematical Neuroscience, 8(1), 1–48.

    Article  Google Scholar 

  • Iacovitti, L., Wei, X., Cai, J., Kostuk, E. W., Lin, R., Gorodinsky, A., Roman, P., Kusek, G., Das, S. S., & Dufour, A. (2014). The hTH-GFP reporter rat model for the study of Parkinson's disease. PloS One, 9(12), e113151.

  • Izhikevich, E. M. (2000). Neural excitability, spiking and bursting. International Journal of Bifurcation and Chaos, 10(06), 1171–1266.

    Article  Google Scholar 

  • Kimrey, J., Vo, T. & Bertram, R. (2020a). big ducks in the heart: Canard analysis can explain large early afterdepolarizations in cardiomyocytes. SIAM Journal on Applied Dynamical Systems, 19(3), 1701–1735.

  • Kimrey, J., Vo, T., & Bertram, R. (2020b). Canard analysis reveals why a large Ca2+ window current promotes early afterdepolarizations in cardiac myocytes. PloS Computational Biology, 16(11), e1008341.

  • Korshunov, K. S., Blakemore, L. J., Bertram, R., & Trombley, P. Q. (2020). Spiking and membrane properties of rat olfactory bulb dopamine neurons. Frontiers in Cellular Neuroscience, 14, 60.

    Article  CAS  Google Scholar 

  • Kshatri, A. S., Gonzalez-Hernandez, A., & Giraldez, T. (2018). Physiological roles and therapeutic potential of Ca2+ activated potassium channels in the nervous system. Frontiers in Molecular Neuroscience, 11, 258.

    Article  Google Scholar 

  • Kubalova, Z. (2003). Inactivation of L-type calcium channels in cardiomyocytes. Experimental and theoretical approaches. General Physiology and Biophysics, 22(4), 441–454.

  • Kügler, P. (2016). Early afterdepolarizations with growing amplitudes via delayed subcritical Hopf bifurcations and unstable manifolds of saddle foci in cardiac action potential dynamics. PloS One, 11(3), e0151178.

  • Lübke, J., Frotscher, M., & Spruston, N. (1998). Specialized electrophysiological properties of anatomically identified neurons in the hilar region of the rat fascia dentata. Journal of Neurophysiology, 79(3), 1518–1534.

    Article  Google Scholar 

  • Perez-Reyes, E. (2003). Molecular physiology of low-voltage-activated T-type calcium channels. Physiological Reviews, 83(1), 117–161.

    Article  CAS  Google Scholar 

  • Ross, M. T., Flores, D., Bertram, R., Johnson, F., Wu, W., & Hyson, R. L. (2019). Experience-dependent intrinsic plasticity during auditory learning. Journal of Neuroscience, 39(7), 1206–1221.

    Article  Google Scholar 

  • Rubin, J., & Wechselberger, M. (2007). Giant squid-hidden canard: The 3D geometry of the Hodgkin-Huxley model. Biological Cybernetics, 97(1), 5–32.

    Article  Google Scholar 

  • Sherman, A. (2011). Dynamical systems theory in physiology. Journal of General Physiology, 138(1), 13–19.

    Article  CAS  Google Scholar 

  • Takahashi, A., Camacho, P., Lechleiter, J. D., & Herman, B. (1999). Measurement of intracellular calcium. Physiological Reviews, 79(4), 1089–1125.

    Article  CAS  Google Scholar 

  • Tinker, A., Aziz, Q., & Thomas, A. (2014). The role of ATP-sensitive potassium channels in cellular function and protection in the cardiovascular system. British Journal of Pharmacology, 171(1), 12–23.

    Article  CAS  Google Scholar 

  • Vo, T., Bertram, R., & Wechselberger, M. (2013). Multiple geometric viewpoints of mixed mode dynamics associated with pseudo-plateau bursting. SIAM Journal on Applied Dynamical Systems, 12(2), 789–830.

    Article  Google Scholar 

  • Wahl-Schott, C., & Biel, M. (2009). HCN channels: Structure, cellular regulation and physiological function. Cellular and Molecular Life Sciences, 66(3), 470–494.

    Article  CAS  Google Scholar 

  • Yue, C., & Yaari, Y. (2004). KCNQ/M channels control spike afterdepolarization and burst generation in hippocampal neurons. Journal of Neuroscience, 24(19), 4614–4624.

    Article  CAS  Google Scholar 

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Acknowledgements

We thank Dr. Laura Blakemore for her careful reading of the manuscript and helpful comments, and Dr. Theodore Vo for initial discussions. This work was supported by the FSU Chemosensory Training Program (CTP) Grant Award T32 DC000044 from the National Institutes of Health (NIH/NIDCD), NIH Grant R21DA044442 to PQT and RB, and grant number DMS 1853342 from the National Science Foundation to RB.

Funding

This work was supported by the FSU Chemosensory Training Program (CTP) Grant Award T32 DC000044 from the National Institutes of Health (NIH/NIDCD), NIH Grant R21DA044442 to PQT and RB, and grant number DMS 1853342 from the National Science Foundation to RB.

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Authors

Contributions

KG performed simulations and helped with writing the manuscript. KK performed experiments and helped with writing the manuscript. PQT oversaw the laboratory and helped with writing the manuscript. RB helped with simulations and writing the manuscript.

Corresponding author

Correspondence to Richard Bertram.

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Ethics approval

All experiments were carried out in accordance with the National Institutes of Health Guide for the Care and Use of Laboratory Animals (8th edition). Approval was granted by the Florida State University Institutional Animal Care and Use Committee (Date: 12/18/18/Protocol #1845).

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The authors declare no conflict of interest.

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Action Editor: Frances K. Skinner.

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Gasior, K., Korshunov, K., Trombley, P.Q. et al. Fast-slow analysis as a technique for understanding the neuronal response to current ramps. J Comput Neurosci 50, 145–159 (2022). https://doi.org/10.1007/s10827-021-00799-0

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  • DOI: https://doi.org/10.1007/s10827-021-00799-0

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