Abstract
Purpose
Distant metastasis is the main obstacle to treating nasopharyngeal carcinoma (NPC). Tumor distance metastasis is a complex process involving the jointly participation of multiple oncogenes, tumor suppressor genes, and metastasis-associated genes. Enough accurate prognostic genes for evaluating metastasis risk are lacking. We aimed to identify more precise biomarkers for NPC metastasis.
Methods
We performed weighted gene co-expression network analysis, differentially expressed gene analysis, univariate and multivariate stepwise Cox regression, and Kaplan–Meier (K-M) survival analyses, on data obtained from RNA sequencing of 10 NPC samples and the public database, to identify key genes correlated with NPC metastasis. Wound healing assays, transwell assays, and immunohistochemistry were conducted to validate our bioinformatic conclusions. Western blotting was performed to evaluate and quantify the effect of identified EMT genes on epithelial–mesenchymal transition (EMT) of NPC.
Results
Combined our own RNA sequencing data and public data, we determined carboxypeptidase vitellogenic-like protein (CPVL) as a tumor suppressor for NPC. Pathway enrichment analyses indicated that genes associated with CPVL are involved in EMT. NPC with low CPVL expression had high tumor purity and low levels of immune cells. Experimental results showed that CPVL protein predominantly expressed in cytoplasmic and membranous and it exhibited higher expression levels in NPC tissues without distant metastasis than those with distant metastasis. CPVL inhibits the migration and invasive capability of NPC cells. Overexpression of CPVL upregulates E-cadherin and ZO-1, whereas it downregulates vimentin, suggesting that CPVL suppresses tumor metastasis by inhibiting EMT.
Conclusion
CPVL inhibits migration and invasion of NPC cells and is associated with tumor metastasis suppression through upregulating epithelial marker and inhibiting mesenchymal marker expression and could be a prognostic biomarker for metastasis risk evaluation in NPC.
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Data availability
The NPC dataset (GSE102349) can be downloaded from Gene Expression Omnibus (GEO) public database (https://www.ncbi.nlm.nih.gov/geo/).
Abbreviations
- NPC:
-
Nasopharyngeal carcinoma
- LR:
-
Local recurrence
- DM:
-
Distant metastasis
- PFS:
-
Progression-free survival
- mRNA:
-
Messenger RNA
- EMT:
-
Epithelial–mesenchymal transition
- NPC-DM:
-
NPC with distant metastasis occurred within five years
- NPC-NM:
-
NPC without tumor progression more than five years
- STUMCCH:
-
Shantou University Medical College Cancer Hospital
- GEO:
-
Gene Expression Omnibus
- WGCNA:
-
Weighted gene correlation network analysis
- Mes:
-
Module eigengenes
- MM:
-
Module membership
- GS:
-
Gene significance
- DEGs:
-
Differentially expressed genes
- GO:
-
Gene Ontology
- KEGG:
-
Kyoto encyclopedia of genes and genomes pathways
- MsigDB:
-
Molecular signatures database
- TILs:
-
Tumor-infiltrating lymphocytes
- TIICs:
-
Tumor-infiltrating immune cells
- TME:
-
Tumor microenvironment
- ROC:
-
Receiver operating characteristic
- K-M:
-
Kaplan–Meier
- DMFS:
-
Distant metastasis-free survival
- AUC:
-
Area under curve
- CPVL-L:
-
Low CPVL expression
- CPVL-H:
-
High CPVL expression
- IHC:
-
Immunohistochemistry
- NC:
-
Negative control
- GC:
-
Gastric cancer
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Acknowledgements
We sincerely appreciate the support of public data with GEO database and contribution from NPC patients received biopsy. This research was funded by Science and Technology Special Fund of Guangdong Province of China (190829105556145).
Funding
This research was funded by Science and Technology Special Fund of Guangdong Province of China (190829105556145).
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All authors contributed to the study conception and design. XW contributed to conceptualization and visualization; KC and XW were involved in methodology and experiments design and implementation; KC and KH contributed to formal analysis; YL was involved in writing—original draft preparation; KC contributed to writing—review and editing; and YH and ZL were involved in supervision. All authors have read and agreed to the published version of the manuscript.
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This study received ethical approval from the ethics board of Shantou University Medical College Cancer Hospital (ethical approval number: 2022154). All adults provided written informed consent including written informed consent for genetic studies, while minors provided written assent, with written informed consent obtained from a parent.
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Wang, X., Chen, L., Huang, K. et al. CPVL suppresses metastasis of nasopharyngeal carcinoma through inhibiting epithelial–mesenchymal transition. J Cancer Res Clin Oncol 149, 16473–16488 (2023). https://doi.org/10.1007/s00432-023-05340-7
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DOI: https://doi.org/10.1007/s00432-023-05340-7