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An R2R3-MYB transcription factor, OjMYB1, functions in anthocyanin biosynthesis in Oenanthe javanica

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Abstract

Main conclusion

This study showed that an R2R3-MYB transcription factor, OjMYB1, is involved in anthocyanin biosynthesis and accumulation in Oenanthe javanica.

Anthocyanins can be used as safe natural food colorants, obtained from many plants. R2R3-MYB transcription factors (TFs) play important roles in anthocyanins biosynthesis during plant development. Oenanthe javanica is a popular vegetable with high nutritional values and numerous medical functions. O. javanica has purple petioles that are mainly due to anthocyanins accumulation. In the present study, the gene encoding an R2R3-MYB TF, OjMYB1, was isolated from purple O. javanica. Sequencing results showed that OjMYB1 contained a 912-bp open reading frame encoding 303 amino acids. Sequence alignments revealed that OjMYB1 contained bHLH-interaction motif ([DE]Lx2[RK]x3Lx6Lx3R) and ANDV motif ([A/G]NDV). Phylogenetic analysis indicated that the OjMYB1 classified into the anthocyanins biosynthesis clade. Subcellular localization assay showed that OjMYB1 was a nuclear protein in vivo. The heterologous expression of OjMYB1 in Arabidopsis could enhance the anthocyanins content and up-regulate the expression levels of the structural genes-related anthocyanins biosynthesis. Yeast two-hybrid assay indicated that OjMYB1 could interact with AtTT8 and AtEGL3 proteins. Enzymatic analysis revealed that overexpression of OjMYB1 gene up-regulated the enzyme activity of 3-O-glycosyltransferase encoded by AtUGT78D2 in transgenic Arabidopsis. Our results provided a comprehensive understanding of the structure and function of OjMYB1 TF in O. javanica.

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Abbreviations

CHI:

Chalcone isomerase

CHS:

Chalcone synthase

DFR:

Dihydroflavonol 4-reductase

F3H:

Flavanone 3-hydroxylase

F3′H:

Flavonoid 3′-hydroxylase

fw:

Fresh weight

LDOX:

Leucoanthocyanidin dioxygenase

ORF:

Open reading frame

TF:

Transcription factor

References

  • Ahmed NU, Park JI, Jung HJ, Hur Y, Nou IS (2015) Anthocyanin biosynthesis for cold and freezing stress tolerance and desirable color in Brassica rapa. Funct Integr Genom 15(4):383–394. doi:10.1007/s10142-014-0427-7

    Article  CAS  Google Scholar 

  • Appelhagen I, Jahns O, Bartelniewoehner L, Sagasser M, Weisshaar B, Stracke R (2011) Leucoanthocyanidin dioxygenase in Arabidopsis thaliana: characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes. Gene 484(1–2):61–68. doi:10.1016/j.gene.2011.05.031

    Article  CAS  PubMed  Google Scholar 

  • Bai YH, Pattanaik S, Patra B, Werkman JR, Xie CH, Yuan L (2011) Flavonoid-related basic helix-loop-helix regulators, NtAn1a and NtAn1b, of tobacco have originated from two ancestors and are functionally active. Planta 234(2):363–375. doi:10.1007/s00425-011-1407-y

    Article  CAS  PubMed  Google Scholar 

  • Bowles D, Lim EK, Poppenberger B, Vaistij FE (2006) Glycosyltransferases of lipophilic small molecules. Annu Rev Plant Biol 57:567–597. doi:10.1146/annurev.arplant.57.032905.105429

    Article  CAS  PubMed  Google Scholar 

  • Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248–254

    Article  CAS  PubMed  Google Scholar 

  • Deguchi A, Ohno S, Hosokawa M, Tatsuzawa F, Doi M (2013) Endogenous post-transcriptional gene silencing of flavone synthase resulting in high accumulation of anthocyanins in black dahlia cultivars. Planta 237(5):1325–1335. doi:10.1007/s00425-013-1848-6

    Article  CAS  PubMed  Google Scholar 

  • Dubos C, Stracke R, Grotewold E, Weisshaar B, Martin C, Lepiniec L (2010) MYB transcription factors in Arabidopsis. Trends Plant Sci 15(10):573–581. doi:10.1016/j.tplants.2010.06.005

    Article  CAS  PubMed  Google Scholar 

  • Feller A, Machemer K, Braun EL, Grotewold E (2011) Evolutionary and comparative analysis of MYB and bHLH plant transcription factors. Plant J 66(1):94–116. doi:10.1111/j.1365-313X.2010.04459.x

    Article  CAS  PubMed  Google Scholar 

  • Gietz RD, Schiestl RH (2007) High-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method. Nat Protoc 2(1):31–34. doi:10.1038/nprot.2007.13

    Article  CAS  PubMed  Google Scholar 

  • Gonzalez A, Zhao M, Leavitt JM, Lloyd AM (2008) Regulation of the anthocyanin biosynthetic pathway by the TTG1/bHLH/Myb transcriptional complex in Arabidopsis seedlings. Plant J 53(5):814–827. doi:10.1111/j.1365-313X.2007.03373.x

    Article  CAS  PubMed  Google Scholar 

  • He F, Mu L, Yan GL, Liang NN, Pan QH, Wang J, Reeves MJ, Duan CQ (2010) Biosynthesis of anthocyanins and their regulation in colored grapes. Molecules 15(12):9057–9091. doi:10.3390/molecules15129057

    Article  CAS  PubMed  Google Scholar 

  • Heim MA, Jakoby M, Werber M, Martin C, Weisshaar B, Bailey PC (2003) The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Mol Biol Evol 20(5):735–747. doi:10.1093/molbev/msg088

    Article  CAS  PubMed  Google Scholar 

  • Heppel SC, Jaffe FW, Takos AM, Schellmann S, Rausch T, Walker AR, Bogs J (2013) Identification of key amino acids for the evolution of promoter target specificity of anthocyanin and proanthocyanidin regulating MYB factors. Plant Mol Biol 82(4–5):457–471. doi:10.1007/s11103-013-0074-8

    Article  CAS  PubMed  Google Scholar 

  • Huang W, Lv H, Wang Y (2017) Functional characterization of a Novel R2R3-MYB transcription factor modulating the flavonoid biosynthetic pathway from Epimedium sagittatum. Front Plant Sci 8:1274. doi:10.3389/fpls.2017.01274

    Article  PubMed  PubMed Central  Google Scholar 

  • Jaakola L, Maatta K, Pirttila AM, Torronen R, Karenlampi S, Hohtola A (2002) Expression of genes involved in anthocyanin biosynthesis in relation to anthocyanin, proanthocyanidin, and flavonol levels during bilberry fruit development. Plant Physiol 130(2):729–739. doi:10.1104/pp.006957

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Jefferson RA, Kavanagh TA, Bevan MW (1987) Gus fusions—beta-glucuronidase as a sensitive and versatile gene fusion marker in higher-plants. EMBO J 6(13):3901–3907

    CAS  PubMed  PubMed Central  Google Scholar 

  • Jiang Q, Wang F, Li MY, Ma J, Tan GF, Xiong AS (2014) Selection of suitable reference genes for qPCR normalization under abiotic stresses in Oenanthe javanica (BI.) DC. PLoS One 9(3):e92262. doi:10.1371/journal.pone.0092262

    Article  PubMed  PubMed Central  Google Scholar 

  • Jiang Q, Wang F, Tan HW, Li MY, Xu ZS, Tan GF, Xiong AS (2015) De novo transcriptome assembly, gene annotation, marker development, and miRNA potential target genes validation under abiotic stresses in Oenanthe javanica. Mol Genet Genom 290(2):671–683. doi:10.1007/s00438-014-0953-y

    Article  CAS  Google Scholar 

  • Jin X, Huang H, Wang L, Sun Y, Dai S (2016) Transcriptomics and metabolite analysis reveals the molecular mechanism of anthocyanin biosynthesis branch pathway in different Senecio cruentus cultivars. Front Plant Sci 7:1307. doi:10.3389/fpls.2016.01307

    PubMed  PubMed Central  Google Scholar 

  • Kobayashi S, Goto-Yamamoto N, Hirochika H (2004) Retrotransposon-induced mutations in grape skin color. Science 304(5673):982. doi:10.1126/science.1095011

    Article  PubMed  Google Scholar 

  • Kwon D, Yoon S, Carter O, Bailey GS, Dashwood RH (2006) Antioxidant and antigenotoxic activities of Angelica keiskei, Oenanthe javanica and Brassica oleracea in the Salmonella mutagenicity assay and in HCT116 human colon cancer cells. Biofactors 26(4):231–244

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Li YY, Mao K, Zhao C, Zhao XY, Zhang HL, Shu HR, Hao YJ (2012) MdCOP1 ubiquitin E3 ligases interact with MdMYB1 to regulate light-induced anthocyanin biosynthesis and red fruit coloration in apple. Plant Physiol 160(2):1011–1022. doi:10.1104/pp.112.199703

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Li C, Qiu J, Yang G, Huang S, Yin J (2016) Isolation and characterization of a R2R3-MYB transcription factor gene related to anthocyanin biosynthesis in the spathes of Anthurium andraeanum (Hort.). Plant Cell Rep 35(10):2151–2165. doi:10.1007/s00299-016-2025-8

    Article  CAS  PubMed  Google Scholar 

  • Lim EK, Ashford DA, Hou BK, Jackson RG, Bowles DJ (2004) Arabidopsis glycosyltransferases as biocatalysts in fermentation for regioselective synthesis of diverse quercetin glucosides. Biotechnol Bioeng 87(5):623–631. doi:10.1002/bit.20154

    Article  CAS  PubMed  Google Scholar 

  • Lin-Wang K, Bolitho K, Grafton K, Kortstee A, Karunairetnam S, McGhie TK, Espley RV, Hellens RP, Allan AC (2010) An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae. BMC Plant Biol 10:50. doi:10.1186/1471-2229-10-50

    Article  PubMed  PubMed Central  Google Scholar 

  • Ma CJ, Lee KY, Jeong EJ, Kim SH, Park J, Choi YH, Kim YC, Sung SH (2010) Persicarin from water dropwort (Oenanthe javanica) protects primary cultured rat cortical cells from glutamate-induced neurotoxicity. Phytother Res 24(6):913–918. doi:10.1002/ptr.3065

    CAS  PubMed  Google Scholar 

  • Matsui K, Umemura Y, Ohme-Takagi M (2008) AtMYBL2, a protein with a single MYB domain, acts as a negative regulator of anthocyanin biosynthesis in Arabidopsis. Plant J 55(6):954–967. doi:10.1111/j.1365-313X.2008.03565.x

    Article  CAS  PubMed  Google Scholar 

  • Naing AH, Park KI, Ai TN, Chung MY, Han JS, Kang YW, Lim KB, Kim CK (2017) Overexpression of snapdragon Delila (Del) gene in tobacco enhances anthocyanin accumulation and abiotic stress tolerance. BMC Plant Biol 17(1):65. doi:10.1186/s12870-017-1015-5

    Article  PubMed  PubMed Central  Google Scholar 

  • Nesi N, Debeaujon I, Jond C, Pelletier G, Caboche M, Lepiniec L (2000) The TT8 gene encodes a basic helix-loop-helix domain protein required for expression of DFR and BAN genes in Arabidopsis siliques. Plant Cell 12(10):1863–1878. doi:10.1105/tpc.12.10.1863

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Ogata K, Morikawa S, Nakamura H, Sekikawa A, Inoue T, Kanai H, Sarai A, Ishii S, Nishimura Y (1994) Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices. Cell 79(4):639–648. doi:10.1016/0092-8674(94)90549-5

    Article  CAS  PubMed  Google Scholar 

  • Oh JE, Kim YH, Kim JH, Kwon YR, Lee H (2011) Enhanced level of anthocyanin leads to increased salt tolerance in Arabidopsis PAP1-D plants upon sucrose treatment. J Korean Soc Appl Biol Chem 54(1):79–88. doi:10.3839/jksabc.2011.011

    Article  CAS  Google Scholar 

  • Park JH, Cho JH, Kim IH, Ahn JH, Lee JC, Chen BH, Shin BN, Tae HJ, Yoo KY, Hong S, Kang IJ, Won MH, Kim JD (2015) Oenanthe javanica extract protects against experimentally induced ischemic neuronal damage via its antioxidant effects. Chin Med J (Engl) 128(21):2932–2937. doi:10.4103/0366-6999.168063

    Article  Google Scholar 

  • Pattanaik S, Kong Q, Zaitlin D, Werkman JR, Xie CH, Patra B, Yuan L (2010) Isolation and functional characterization of a floral tissue-specific R2R3 MYB regulator from tobacco. Planta 231(5):1061–1076. doi:10.1007/s00425-010-1108-y

    Article  CAS  PubMed  Google Scholar 

  • Petroni K, Tonelli C (2011) Recent advances on the regulation of anthocyanin synthesis in reproductive organs. Plant Sci 181(3):219–229. doi:10.1016/j.plantsci.2011.05.009

    Article  CAS  PubMed  Google Scholar 

  • Ramsay NA, Glover BJ (2005) MYB-bHLH-WD40 protein complex and the evolution of cellular diversity. Trends Plant Sci 10(2):63–70. doi:10.1016/j.tplants.2004.12.011

    Article  CAS  PubMed  Google Scholar 

  • Reed J (2002) Cranberry flavonoids, atherosclerosis and cardiovascular health. Crit Rev Food Sci Nutr 42(3 Suppl):301–316. doi:10.1080/10408390209351919

    Article  CAS  PubMed  Google Scholar 

  • Rinaldo AR, Cavallini E, Jia Y, Moss SM, McDavid DA, Hooper LC, Robinson SP, Tornielli GB, Zenoni S, Ford CM, Boss PK, Walker AR (2015) A grapevine anthocyanin acyltransferase, transcriptionally regulated by VvMYBA, can produce most acylated anthocyanins present in grape skins. Plant Physiol 169(3):1897–1916. doi:10.1104/pp.15.01255

    CAS  PubMed  PubMed Central  Google Scholar 

  • Sarma AD, Sharma R (1999) Anthocyanin-DNA copigmentation complex: mutual protection against oxidative damage. Phytochemistry 52(7):1313–1318. doi:10.1016/S0031-9422(99)00427-6

    Article  CAS  Google Scholar 

  • Schmittgen TD, Livak KJ (2008) Analyzing real-time PCR data by the comparative C(T) method. Nat Protoc 3(6):1101–1108

    Article  CAS  PubMed  Google Scholar 

  • Schwinn K, Venail J, Shang Y, Mackay S, Alm V, Butelli E, Oyama R, Bailey P, Davies K, Martin C (2006) A small family of MYB-regulatory genes controls floral pigmentation intensity and patterning in the genus Antirrhinum. Plant cell 18(4):831–851. doi:10.1105/tpc.105.039255

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Shih PH, Chan YC, Liao JW, Wang MF, Yen GC (2010) Antioxidant and cognitive promotion effects of anthocyanin-rich mulberry (Morus atropurpurea L.) on senescence-accelerated mice and prevention of Alzheimer’s disease. J Nutr Biochem 21(7):598–605. doi:10.1016/j.jnutbio.2009.03.008

    Article  CAS  PubMed  Google Scholar 

  • Singh R, Low ET, Ooi LC, Ong-Abdullah M, Nookiah R, Ting NC, Marjuni M, Chan PL, Ithnin M, Manaf MA, Nagappan J, Chan KL, Rosli R, Halim MA, Azizi N, Budiman MA, Lakey N, Bacher B, Van Brunt A, Wang C, Hogan M, He D, MacDonald JD, Smith SW, Ordway JM, Martienssen RA, Sambanthamurthi R (2014) The oil palm VIRESCENS gene controls fruit colour and encodes a R2R3-MYB. Nat Commun 5:4106. doi:10.1038/ncomms5106

    CAS  PubMed  PubMed Central  Google Scholar 

  • Stracke R, Werber M, Weisshaar B (2001) The R2R3-MYB gene family in Arabidopsis thaliana. Curr Opin Plant Biol 4(5):447–456

    Article  CAS  PubMed  Google Scholar 

  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10):2731–2739. doi:10.1093/molbev/msr121

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Telias A, Kui LW, Stevenson DE, Cooney JM, Hellens RP, Allan AC, Hoover EE, Bradeen JM (2011) Apple skin patterning is associated with differential expression of MYB10. BMC Plant Biol 11:93. doi:10.1186/1471-2229-11-93

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Tian J, Peng Z, Zhang J, Song T, Wan H, Zhang M, Yao Y (2015) McMYB10 regulates coloration via activating McF3′H and later structural genes in ever-red leaf crabapple. Plant Biotechnol J 13(7):948–961. doi:10.1111/pbi.12331

    Article  CAS  PubMed  Google Scholar 

  • Vogt T, Jones P (2000) Glycosyltransferases in plant natural product synthesis: characterization of a supergene family. Trends Plant Sci 5(9):380–386

    Article  CAS  PubMed  Google Scholar 

  • Wang WN, Yang XB, Liu HZ, Huang ZM, Wu GX (2005) Effect of Oenanthe javanica flavone on human and duck hepatitis B virus infection. Acta Pharmacol Sin 26(5):587–592. doi:10.1111/j.1745-7254.2005.00055.x

    Article  CAS  PubMed  Google Scholar 

  • Xu ZS, Huang Y, Wang F, Song X, Wang GL, Xiong AS (2014) Transcript profiling of structural genes involved in cyanidin-based anthocyanin biosynthesis between purple and non-purple carrot (Daucus carota L.) cultivars reveals distinct patterns. BMC Plant Biol 14:262. doi:10.1186/s12870-014-0262-y

    Article  PubMed  PubMed Central  Google Scholar 

  • Xu ZS, Feng K, Que F, Wang F, Xiong AS (2017) A MYB transcription factor, DcMYB6, is involved in regulating anthocyanin biosynthesis in purple carrot taproots. Sci Rep 7:45324. doi:10.1038/srep45324

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Yamagishi M, Shimoyamada Y, Nakatsuka T, Masuda K (2010) Two R2R3-MYB genes, homologs of petunia AN2, regulate anthocyanin biosyntheses in flower tepals, tepal spots and leaves of asiatic hybrid lily. Plant Cell Physiol 51(3):463–474. doi:10.1093/pcp/pcq011

    Article  CAS  PubMed  Google Scholar 

  • Yang SA, Jung YS, Lee SJ, Park SC, Kim MJ, Lee EJ, Byun HJ, Jhee KH, Lee SP (2014) Hepatoprotective effects of fermented field water-dropwort (Oenanthe javanica) extract and its major constituents. Food Chem Toxicol 67:154–160. doi:10.1016/j.fct.2014.02.010

    Article  CAS  PubMed  Google Scholar 

  • Zhang XR, Henriques R, Lin SS, Niu QW, Chua NH (2006) Agrobacterium-mediated transformation of Arabidopsis thaliana using the floral dip method. Nat Protoc 1(2):641–646. doi:10.1038/nprot.2006.97

    Article  CAS  PubMed  Google Scholar 

  • Zhang X, Gou M, Guo C, Yang H, Liu CJ (2015) Down-regulation of Kelch domain-containing F-box protein in Arabidopsis enhances the production of (poly) phenols and tolerance to ultraviolet radiation. Plant Physiol 167(2):337–350. doi:10.1104/pp.114.249136

    Article  CAS  PubMed  Google Scholar 

  • Zhou H, Lin-Wang K, Wang H, Gu C, Dare AP, Espley RV, He H, Allan AC, Han Y (2015) Molecular genetics of blood-fleshed peach reveals activation of anthocyanin biosynthesis by NAC transcription factors. Plant J 82(1):105–121. doi:10.1111/tpj.12792

    Article  CAS  PubMed  Google Scholar 

  • Zimmermann IM, Heim MA, Weisshaar B, Uhrig JF (2004) Comprehensive identification of Arabidopsis thaliana MYB transcription factors interacting with R/B-like BHLH proteins. Plant J 1:22–34. doi:10.1111/j.1365-313X.2004.02183.x

    Article  Google Scholar 

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Acknowledgements

The research was supported by the New Century Excellent Talents in University (NCET-11-0670); National Natural Science Foundation of China (31272175; 31501775); Jiangsu Natural Science Foundation (BK20130027); Priority Academic Program Development of Jiangsu Higher Education Institutions (PAPD).

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Feng, K., Xu, ZS., Que, F. et al. An R2R3-MYB transcription factor, OjMYB1, functions in anthocyanin biosynthesis in Oenanthe javanica . Planta 247, 301–315 (2018). https://doi.org/10.1007/s00425-017-2783-8

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