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Phylogenetic Analysis of Four Dung Beetle Species of Neotropical Genus Oxyternon (Coleoptera: Scarabaeidae: Scarabaeinae) Based on 28S and COI Partial Regions

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Advances in Computational Biology

Abstract

Oxysternon is a neotropical genus consists of 11 species, distributed between the north of the Tropic of Capricorn and east of the Andes. Were evaluated the monophyly of 4 species of Oxysternon using partial sequences of 28S rRNA genes and Cytochrome Oxidase I (COI). Sequences were aligned under the criteria GENEIOUS (Geneious software, 6.1.2 version). Topology was constructed showing phylogenetic relationships using the model of genetic distance of Jukes-Cantor method and the nearest neighbor, Neighbor-Joining to build trees, with 100,000 bootstrap replicates. The aligned sequences were subjected to parsimony analysis using the program TNT 1.1. The most parsimonious topologies showed a pattern related between O. conspicillatum with O. silenus, relationship sustained with a node bootstrap of 88.2 for the 28S ribosomal marker and 100 for the COI marker. Such groupings confirmed the current taxonomic grouping, shown by internal molecular characteristics, possibly explained by the similar geographic distribution.

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References

  1. Edmonds, W.D., Zidela, J.: Revision of the Neotropical dung beetle Genus Oxysternon (Scarabaeidae: Scarabaeinae: Phanaeini). Folia Heyrovskyana 11(suppl.), 1–58 (2004)

    Google Scholar 

  2. Vitolo, A.: Clave para la identificación de los géneros y especies Phanaaeinas (Coleoptera: scarabaeidae: coprinae: phanaeini) de Colombia. Revista Académica Colombiana de la Ciencia 26(93) (2000)

    Google Scholar 

  3. Edmonds, W.D.: Comparative skeletal morphology, systematics and evolution on the Phanaeine dung beetles (Coleoptera: Scarabaeidae). The University of Kansas Science Bulletin 49(11), 731–874 (1972)

    Google Scholar 

  4. SIB. Sistema de Información de Biodiversidad, http://data.sibcolombia.net/species/30210 (consultado May 05, 2013)

  5. Goloboff, P., Farris, S., Nixon, K.: TNT (Tree analysis using New Technology) (2000)

    Google Scholar 

  6. Monaghan, M., Inward, D., Hunt, T., Vogler, A.: A molecular phylogenetic analysis of the Scarabaeinae (dung beetles). Molecular Phylogenetics and Evolution 45(2), 674–692 (2007)

    Article  Google Scholar 

  7. Price, D.L.: Phylogeny and biogeography of the dung beetle genus Phanaeus (Coleoptera: Scarabaeidae). Journal Systematic Entomology 34(1), 137–150 (2009)

    Article  Google Scholar 

  8. Brower, A.V.Z.: Rapid morplogical radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution. Proceedings of the National Academy of Sciences of the USA 91(14), 6491–6495 (1994)

    Article  Google Scholar 

  9. Hasegawa, M., Kishino, H., Saitou, N.: On the Maximum Likelihood Method in Molecular Phylogenetics. Journal of Molecular Evolution 32, 443–445 (1991)

    Article  Google Scholar 

  10. Jukes, T.H., Cantor, C.R.: Evolution of protein molecules. In: Munro, H.N. (ed.) Mammalian Protein Metabolism, vol. 3, pp. 21–132 (1969)

    Google Scholar 

  11. Wang, I.A.: Recognizing the temporal distinctions between landscape genetics and phylogeography. Molecular Ecology 19, 2605–2608 (2010)

    Article  Google Scholar 

  12. Hellberg, M.E.: No variation and low synonymous substitution rates in coral mtDNA despite high nuclear variation. BMC Evolution Biology 6, 24 (2006)

    Article  Google Scholar 

  13. Kartavtsev, Y.P., Lee, J.S.: Analysis of Nucleotide Diversity at the Cytochrome b and Cytochrome Oxidase 1 Genes at the Population, Species, and Genus Levels. Russian Journal of Genetics 42(4), 341–362 (2006)

    Article  Google Scholar 

  14. Hebert, P.D.N., Ratnasingham, S.: Barcoding Animal Life: Cytochrome c Oxidase Subunit 1 Divergence samong Closely Related Species. Proc. R. Soc. London, B 270, 1512 (2002)

    Google Scholar 

  15. Medina, C.A., Lopera-Toro, A., Vitolo, A., Gill, B.: Escarabajos Coprófagos (Coleoptera: Scarabaeidae: Scarabaeinae) Revista de Colombia. Biota Colombiana 2(2), 131–144 (2001)

    Google Scholar 

  16. Hamel-Leigue, A., Herzog, S., Mann, D., Larsen, T.H., Gill, B.D., Edmonds, W.D., Spector, S.: Distribution and natural history of the dung beetle tribe Phanaeini (Coleoptera: Scarabaeidae: scarabaeinae) in Bolivia. Kempffiana 5(2), 43–95 (2009)

    Google Scholar 

  17. Olsoufieff, Les Phanaeides, G.: Famille Scarabaeidae - Tr. Coprini. Revue Illustrée d’Entomologie 13, 4–172 (1924)

    Google Scholar 

  18. Medina, C.A., Pulido, L.A.: Escarabajos coprófagos (Coleoptera: Scarabaeinae) de la Orinoquia colombiana. Biota Colombiana 10(1&2), 55–62 (2009)

    Google Scholar 

  19. Gillespie, J.J., Yoder, J.M., Wharton, R.A.: Predicted Secondary Structure for 28S and 18S rRNA from Ichneumonoidea (Insecta: Hymenoptera: Apocrita): Impact on Sequence Alignment and Phylogeny Estimation. Journal Molecular Evolution 61, 114–137 (2005)

    Article  Google Scholar 

  20. Pulido Herrera, L.A., Medina, C.A., Riveros, R.A.: Nuevos registros de escarabajos coprófagos (Scarabaeidae: scarabaeinae) para la región andina de Colombia. Rev. Academia Colombiana Ciencias 31(119), 305–310 (2007)

    Google Scholar 

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Correspondence to Cuadrado-Ríos Sebastián .

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Sebastián, CR., Katherine, CV., César, LG., Víctor Hugo, GM. (2014). Phylogenetic Analysis of Four Dung Beetle Species of Neotropical Genus Oxyternon (Coleoptera: Scarabaeidae: Scarabaeinae) Based on 28S and COI Partial Regions. In: Castillo, L., Cristancho, M., Isaza, G., Pinzón, A., Rodríguez, J. (eds) Advances in Computational Biology. Advances in Intelligent Systems and Computing, vol 232. Springer, Cham. https://doi.org/10.1007/978-3-319-01568-2_31

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  • DOI: https://doi.org/10.1007/978-3-319-01568-2_31

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