Abstract
Previously, we described a method for a recombinase-directed stacking of new DNA to an existing transgenic locus. Here, we describe how we can similarly stack DNA molecules in vitro and that the in vitro derived gene stack can be incorporated into an Agrobacterium transformation vector by in vitro recombination. After transfer to the chromosome by Agroinfection, the transgenic locus harbors a new target site that can be used for the subsequent in vivo stacking of new DNA. Alternatively, the in vitro derived gene stack has the potential to be integrated directly into the plant genome in vivo at a preexisting chromosomal target. Being able to stack DNA in vitro as well as in vivo, and with compatibility between the two systems, brings new flexibility for using the recombinase-mediated approach for transgene stacking.
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References
Vain P (2007) Thirty years of plant transformation technology development. Plant Biotechnol J 5:221–229
Que Q, Chilton M-DM, de Fontes CM, He C, Nuccio M, Zhu T, Wu Y, Chen JS, Shi L (2010) Trait stacking in transgenic crops: challenges and opportunities. GM Crops 1:220–229
Li MZ, Elledge SJ (2007) Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC. Nat Methods 4:251–256
Chen QJ, Zhou HM, Chen J, Wang XC (2006) A Gateway-based platform for multigene plant transformation. Plant Mol Biol 62:927–936
Hartley JL (2000) DNA Cloning using in vitro site-specific recombination. Genome Res 10:1788–1795
Sasaki Y, Sone T, Yoshida S, Yahata K, Hotta J, Chesnut JD, Honda T, Imamoto F (2004) Evidence for high specificity and efficiency of multiple recombination signals in mixed DNA cloning by the Multisite Gateway system. J Biotechnol 107:233–243
Lin L, Liu YG, Xu X, Li B (2003) Efficient linking and transfer of multiple genes by a multigene assembly and transformation vector system. Proc Natl Acad Sci U S A 100:5962–5967
Thorpe HM, Smith MCM (1998) In vitro site-specific integration of bacteriophage DNA catalyzed by a recombinase of the resolvase/invertase family. Proc Natl Acad Sci U S A 95:5505–5510
Abremski K, Hoess R (1984) Bacteriophage P1 site-specific recombination. purification and properties of the Cre recombinase protein. J Biol Chem 259:1509–1514
Kim AI, Ghosh P, Aaron MA, Bibb LA, Jain S, Hatfull GF (2003) Mycobacteriophage Bxb1 integrates into the Mycobacterium smegmatis groEL1 gene. Mol Microbiol 50:463–473
Yau YY, Wang Y, Thomson JG, Ow DW (2011) Method for Bxb1-mediated site-specific integration in planta. Methods Mol Biol 701:147–166
Ow DW (2005) Transgene management via multiple site-specific recombination systems. In Vitro Cell Dev Biol-Plant 41:213–219
Hou LL, Yau YY, Wei JJ, Han ZG, Dong ZC, Ow DW (2014) An open-source system for in planta gene stacking by Bxb1 and Cre recombinases. Mol Plant 7:1756–1765
Li RY, Han ZG, Hou LL, Kaur G, Ow DW (2015) Method for biolistic site-specific integration in plants catalyzed by Bxb1 integrase. Methods Mol Biol. This volume
Studier FW, Moffatt BA (1986) Use of bacteriophage-T7 RNA-polymerase to direct selective high-level expression of cloned genes. J Mol Biol 189:113–130
Grant SGN, Jessee J, Bloom FR, Hanahan D (1990) Differential plasmid rescue from transgenic mouse DNAs into Escherichia-Coli methylation-restriction mutants. Proc Natl Acad Sci U S A 87:4645–4649
Velappan N, Sblattero D, Chasteen L, Pavlik P, Bradbury ARM (2007) Plasmid incompatibility: more compatible than previously thought? Protein Eng Des Sel 20:309–313
Sutcliffe JG (1979) Complete nucleotide-sequence of the Escherichia-Coli plasmid-pBR322. Cold Spring Harb Symp 43:77–90
Hajdukiewicz P, Svab Z, Maliga P (1994) The small, versatile pPZP family of Agrobacterium binary vectors for plant transformation. Plant Mol Biol 25:989–994
Ormo M, Cubitt AB, Kallio K, Gross LA, Tsien RY, Remington SJ (1996) Crystal structure of the Aequorea victoria green fluorescent protein. Science 273:1392–1395
Dale EC, Ow DW (1991) Gene-Transfer with subsequent removal of the selection gene from the host genome. Proc Natl Acad Sci U S A 88:10558–10562
Russell SH, Hoopes JL, Odell JT (1992) Directed excision of a transgene from the plant genome. Mol Gen Genet 234:49–59
Kholodii G (2001) The shuffling function of resolvases. Gene 239:121–130
Moon HS, Abercrombie LL, Eda S, Blanvillain R, Thomson JG, Ow DW, Stewart CN (2011) Transgene excision in pollen using a codon optimized serine resolvase CinH-RS2 site-specific recombination system. Plant Mol Biol 75:621–631
Acknowledgments
We thank Z. Han for pC35SCreB and pZH36. This work received support from Guangdong Province, China Talent Funds 2010 and MOST/Ministry of Agriculture Grant 2010ZX08010-001. Authors also affiliated with the Key laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement.
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Chen, W., Ow, D.W. (2016). Protocol for In Vitro Stacked Molecules Compatible with In Vivo Recombinase-Mediated Gene Stacking. In: Murata, M. (eds) Chromosome and Genomic Engineering in Plants. Methods in Molecular Biology, vol 1469. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-4931-1_3
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DOI: https://doi.org/10.1007/978-1-4939-4931-1_3
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